Astyanax mexicanus (Mexican tetra): 103029385
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Entry
103029385 CDS
T05042
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
amex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103029385 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103029385 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103029385 (srsf1a)
Spliceosome [BR:
amex03041
]
Common components
Common spliceosomal components
SR proteins
103029385 (srsf1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
103029385
NCBI-ProteinID:
XP_007248694
Ensembl:
ENSAMXG00000035996
UniProt:
A0A3B1J8X2
LinkDB
All DBs
Position
18
Genome browser
AA seq
252 aa
AA seq
DB search
MSGGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGAGGAPRGRYGPPS
RRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLD
NTKFRSHEGETAYIRVKMDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRGRGSPQ
YSPRHSRSRSRS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggtgtgatccgaggcccggctggcagcaacgactgccggatttacgtgggg
aacctcccgcccgatatccgcacgaaggacgtggaggacgtgttctataagtacggggcg
atccgggatatcgacctgaagaaccggagaggcggaccgccctttgcctttgtcgagttc
gaggaccccagagatgcagaggatgctgtgtatgcacgggacggctatgattacgatggg
tacagacttcgagtggaattcccgagaagcggccgtggaatggggcgaggaggttttggt
ggcggcggtggcggtggtggagctggtggagcaccaaggggcagatatggacctccatcc
agacgttctgaatacagagtaattgtttcaggcctaccaccaagcggcagctggcaggat
ctgaaggatcacatgcgtgaagcaggtgatgtatgttatgctgacgttttccgagatgga
actggtgtggtggagtttgtgcgcaaagaagacatgacctacgctgttcgaaagctggat
aacactaagttccgctcacacgagggggaaactgcatacattcgagtgaaaatggatggt
ccacgcagcccaagctatggaagatcaaggtccaggagccgcagtcgcagccggagtcgc
agtagaagcaacaaccgtagccgcagctactcgccgcggcgtggccgagggtctcctcag
tactctcctcgccacagccgctctcgctctcggtcctaa
DBGET
integrated database retrieval system
