Astyanax mexicanus (Mexican tetra): 103029508
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Entry
103029508 CDS
T05042
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103029508 (cdhr5a)
Cell adhesion molecules [BR:
amex04515
]
Cadherins
Cadherin related
103029508 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
103029508
NCBI-ProteinID:
XP_022525705
Ensembl:
ENSAMXG00000033683
LinkDB
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Position
16:32573392..32588062
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AA seq
750 aa
AA seq
DB search
MKSQTLRLESTPTHQLTQSVLYVEKYQLVPRPHSPPYLFVFGRYWDMERKSVHIAFGCVL
TFFLYKLCLADKICSVSSELVTIKENNTIDTVVAYINTTTKDVTLTLIQNPDDAFDLKGS
FLIVKKKLDFETLLNPEQLAIQIRCNKTGFKSVTLTVLVQVENINDNPPNFAKSEYAVDV
NELTPVNTSVALIEAKDDDSGVLYYTMEQTLNMYFRLESIYKPNILVNKVLDYDVVQQVT
LTLYVQDTPSPPPPDQVSHTASTTIKINIQDIDNRPPWFQPCTRTNFGIAKICLSPGYKG
RVNLTEKQEGPLQLQPGPVYARDGDRSRNEEISYKIVRGNEDSIFQIDEATGNITMLKPA
DIAGPISLTVLASQVSNRDQFAATSVNIEVMKKSRNPPKFERERYEAYVYTNSGPENMVL
RDRTTNRPFRARARDDDFATGVNPDIRYEVQYSSYVNVTTDGFVLLKKAVRTDSFALQLR
AVDVSTGESGTAALSVLVLPPVGVQSPSEGYRAGDMALLGFVMAALLVLCLIVIGYLISR
LKKQNPGTLKLSEVSNFSSKLCPCLQLRRATNRPRPRDSLQFTNDGFLNEGDMSRFSGRR
MDRRDRRLDSGRVRVVPRERQRHCNLCGMRVHTNHVHRGSPVGHLKARGSKDQVKSILTK
ERRKQGRHKTVWFKESEDSSDIEVEIIPDNIGLRPEEDLEKFVEDSSSPAVRASDVEMGE
LTMMNIQDLDSQEGPNSNHREGMGPDKTEQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcacaaacattgcgactggagtcaactcccactcatcagctaacacagtcagtg
ctttatgtggagaagtaccagctggtgccacggccccatagtcctccatacttatttgtg
ttcggcagatattgggacatggaaagaaaatctgtgcatattgccttcggctgcgtgtta
accttctttctttataaactctgcctggctgacaaaatttgttcagtttcctcagagctt
gtgaccattaaagagaacaacacaatcgacactgttgttgcctatattaacacaacaaca
aaggatgtcacactcactctcatacagaacccagacgatgcctttgatctgaagggctcc
tttctgatagtgaagaaaaagctggactttgagacgctgttaaatcctgagcagctcgca
attcagatccgctgcaataaaacaggcttcaaaagtgtcactttgactgttcttgttcaa
gtggagaacattaacgataaccctcctaattttgctaaaagtgaatatgctgtagatgtt
aacgagctcactcctgttaataccagtgttgccctgattgaagctaaagatgatgattca
ggagttttatattacaccatggagcagactttgaacatgtatttcagactggagagtatt
tacaaaccaaacatcctggtgaataaagttttggattatgatgtggtccagcaggtgact
ctgacactgtatgtgcaggacactccatcacctccaccaccagaccaggtctcccacaca
gcttccacaaccataaaaatcaatatacaggatatcgacaaccgtccaccctggttccaa
ccgtgtacaaggacaaattttggtattgccaaaatctgcctcagtcctgggtataaaggc
agagtcaacctaacagagaaacaggaaggaccattacagctacagcctggtccagtctat
gccagggacggtgacagaagcagaaacgaagagataagttacaaaattgttcgagggaat
gaagacagtatatttcaaatagatgaagccactggaaatataaccatgctaaaaccagca
gacatcgcaggcccaatttccctcacagttttggcttcacaggtgtcaaacagagaccag
tttgccgccacctcagtgaacatcgaggtgatgaaaaagagtcggaacccaccgaaattc
gagagagagcgttacgaggcctatgtttacaccaactcaggccctgagaacatggtgctc
agagacaggacaacaaatagaccctttagagcccgagccagagatgatgacttcgcaact
ggagtaaatccagacataaggtatgaagtacagtacagcagttatgtcaacgtaaccaca
gacgggtttgtgcttctgaaaaaggctgtccgtaccgactcctttgctttgcagctccgg
gctgttgatgtatctactggtgaatcaggaacagctgctctctctgtgctcgtcttacca
cctgtgggagtccagtccccctctgagggataccgtgctggagacatggctttgctgggc
tttgtaatggccgccttgctggtgctctgcctcatcgtgattgggtacctcatctctcgt
ctgaagaaacagaaccccggtacactcaagttatctgaggtcagcaacttctcatcaaag
ctctgcccatgcttgcagcttagaagggctaccaaccggccgaggccgagagacagcctg
cagttcaccaacgacggcttcctgaacgagggggacatgagcagattcagcggcagaaga
atggacaggagagacaggaggctggattcaggacgagtcagagtggtgccccgcgagagg
caacgacactgcaacttgtgcggcatgcgagtccacaccaaccatgtacaccgcggcagc
cccgtcggccacctcaaagccagggggtctaaggaccaggtcaaatccatcctgaccaaa
gagagaaggaagcagggcaggcacaaaaccgtgtggttcaaagagagcgaggattcctct
gatattgaggtggagatcattcctgacaacattgggctcagacccgaggaagatctggag
aaatttgtggaggactcatcctctccagctgtaagggccagtgatgtggaaatgggagag
ctgactatgatgaatatccaggacttggatagccaggaaggacccaattccaatcacaga
gaaggtatgggtccagataaaacagagcagtga
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