Astyanax mexicanus (Mexican tetra): 103029538
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Entry
103029538 CDS
T05042
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103029538 (gabrb1)
04082 Neuroactive ligand signaling
103029538 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103029538 (gabrb1)
Ion channels [BR:
amex04040
]
Ligand-gated channels
GABA-A
103029538 (gabrb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
103029538
NCBI-ProteinID:
XP_007235851
Ensembl:
ENSAMXG00000016807
UniProt:
A0A8B9K7C0
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All DBs
Position
7:23416659..23456447
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AA seq
481 aa
AA seq
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MRASGARWLAEVACLPVLMAVALGRSPVAHSGNEPSNMSYVKVTVDKLLKGYDIRLRPDF
GGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQL
WVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT
LEIESYGYTTDDIEFYWQEGSSVTGVDNIELPQFSIIDYKTLSKKVVFATGSYPRLSLSF
KLKRNIGYFILQTYMPSNLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEKSRLE
CNKVQVVDAHGNIPLTNLDLRLTGAEMLGSLGDPRNTMFSFDSASIQYRKPLTGRDLYGR
PTASLERPITHKKSHLRRRVAQLKVKIPDLTDVNAIDKWSRVIFPITYTFFNLVYWLYYV
H
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgagcggagcccggtggctggcggaggtcgcgtgcctgccggtgttgatggct
gtggcgctcggccgcagcccggtggcgcacagcgggaacgagcccagcaacatgtcgtac
gtgaaagtcacagtggacaaactgctcaaaggctacgacatccggctccggccagacttc
ggaggtcctccggtggacgtggggatgagcatcgacatctccagcatcgacatggtgtct
gaggtgaacatggactacaccatcaccatgtatttccagcagtcgtggcgtgataagcgt
ctgtcctacacagggattcctctcaatctgacgctggataaccgtgtagctgatcagctc
tgggtgcctgacacttacttcataaacgacaaaaaatccttcgttcatggagtcaccgtc
aagaaccgcatgattcgtctgcatccagatggaaccgtgctctatggcctcaggataacc
acaacagcagcctgcatgatggatctgcgcagatatcctctggatgaacagaactgcacc
ctggagatcgaaagctatggctacacaacagatgacattgagttttattggcaggaagga
agttcagtaacaggagtggacaacattgagctgccacagttctccattattgactataaa
actctatctaagaaggtggtgtttgccacaggatcataccctcgcctgtctctgagtttt
aaactgaagagaaacataggatatttcatcctgcagacctacatgccctcaaacctcatc
accatcctttcctgggtttctttctggatcaactatgatgcctctgcagcacgggtagct
ctaggaatcaccactgttctgaccatgaccaccattaacactcatctgcgagagacactg
ccaaagatcccttatgtgaaggccatagatatctacctgatgggctgctttgtgtttgtg
tttttggccctgctggagtatgcgtttgtcaactacatttttttcggacgaggtccacat
ctacagaagaaagtggcagaaaaagctgccaagagcaacaatgagaagagcaggctagag
tgcaacaaagtccaagtggtggatgcccatgggaacattcccctcacgaacctcgacctg
cgcctcactggggctgaaatgctgggtagtctcggagaccctcgcaacaccatgttctcc
ttcgacagcgccagcatccagtaccgcaagcccctgacaggtcgagacctctacggccgg
cccaccgcttccctcgagcggccgatcacacacaagaagagccacttaaggaggcgggtc
gctcagctaaaggtgaaaatcccggacctgacggacgtgaatgccatcgacaagtggtcc
cgtgtcatcttcccaatcacatacaccttctttaacctggtgtactggctttactacgtc
cactag
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