Astyanax mexicanus (Mexican tetra): 103029611
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Entry
103029611 CDS
T05042
Symbol
atxn1b
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103029611 (atxn1b)
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GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
103029611
NCBI-ProteinID:
XP_022530001
Ensembl:
ENSAMXG00000017432
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Position
6:4830165..4844319
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AA seq
855 aa
AA seq
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MKSNQERSNECLPPKKREILALEERQVLVASTVSESQSGENLAWLASIASMASMATVPNH
VPSRSNVSHVDSPSPSAKAPTVVTEYLPEPTSASTSSLSSYRSSTPKGGFSGATTITANP
AVLSSTFAQTTGSIQHTQLPPHLQIIGPYTGYISSQIVPAAASPSQSCRPNQEVYTATGI
IPQASNDNSHKQHLISTLPNVAHTTSQCVQVEGASVGLTVTSPTSQVPIQIHPHSAVLAP
HGLALGPSQVLVHYTDGIVTKHPDPHSRDLQNGSLGEVTVVKHSTSVVKGISGKPESIES
QRQNHNLGLQAQTQVLLPAEYATHDSAGFQTSLMLVSSNHIVANNSTEFQTALDKDQSST
LARVERTGISMVEPVSRVSSLTLSSSDGLAASLASNLSPHSLLQTSPGAPAQELSTSLYS
ATQLPIIGYITSTSGGPQQAVATYPSNLPQHLVISGSPSLLIPVSAGNITTSSAETEVTR
CSIPTIPSTNVPTVPTGLPQAYITAATPVVANPVVVPNGKEVAVPEPHQPHQPHQAHQVH
QVHHTTNAIQSSTQVQLPVFSTEVVAPPAPVITPAPTSPQNALLSPTSALPPYFMKGSII
QLADGELKRVEDLRTEDFLQSAEVSGELKIDSSTVERIDTSRTPDAVIIQFSVGEHKAQV
CVEVLVEYPFFVFGQGWSSCCPDRTTQLLALSCAKLSVGDVCISLTLKSLRNGALSKDQT
FGTLKNHNNIHLKTAKTNGQAGDRPTPREDQRNGKVFFRSEGEQRLESAGFESLNSGKGV
ILSKDEGEGKAQIVVGRKRRWSAPEKGEIGRSQESEPPETLPKLSFLSQEIKVNIEGRSS
MAVRPSDSQKRQGIF
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggagcgcagtaatgagtgcctgcctccaaagaagagagaaatcctg
gcgcttgaggagcgacaggtgctggtagcatcaaccgtgagtgagagccagagcggagag
aacctggcatggcttgcaagcatagccagtatggccagcatggccaccgttcccaaccat
gttccatcacggagcaacgtttcccatgttgacagcccttcaccatcagccaaggctccg
actgtagtgacagagtacctaccagaacccacctctgcttccaccagctctttgtcatct
tatagaagttccacgcccaaaggaggtttctctggagccaccacaataacagccaaccct
gcagtcctttcctccacctttgcccaaacaacaggttccatccagcacactcagttgcca
cctcaccttcaaatcattggaccctacactggctacatctcctcccagatagttccggcc
gcagcaagtccatcccaatcttgtagacccaaccaagaggtttatactgccacaggtatc
attcctcaagcatctaatgacaactcgcataagcaacatttgatttcaaccttgcctaat
gtagcccacacaaccagccagtgcgtccaggtagagggtgcctctgttggcttgacagtc
acatccccaacttctcaagtgcccattcaaattcacccccattcagctgttcttgctcct
catggcctggcccttggtccctctcaagtgcttgttcattacactgatggcattgtcacc
aaacacccagacccccacagcagagatttgcagaacggttctttgggagaggtcacagtg
gtcaaacacagcaccagtgtggtcaagggaatctctggcaaaccagagagtatcgagagc
caaaggcagaatcacaaccttggtctccaggcccaaactcaggtcttgctccctgctgag
tatgccacgcatgatagtgcaggatttcagacatcgttaatgctggtgtcaagcaaccac
attgtggccaataacagtacagagtttcagactgctctggacaaggaccagtcgtcaact
ctggctcgagttgaaagaacaggaatatctatggtggagccagtctccagagtttcctcc
ctcactctgtcatcttccgatggcctggcagcatctctagcttcgaatctttcaccccat
tccctcctgcagacatctcccggtgcccctgcccaggaactttccacaagcctttactca
gccacacagctacccatcattggctacatcaccagcacatccgggggaccccagcaagca
gtggccacgtaccctagcaaccttccacaacatctagttatctcaggcagcccctcactc
cttatccctgtgagtgctggcaacattaccacgtcatctgcagagacagaagtcactcgc
tgctctattcccaccataccctccaccaacgttccgactgttcccacaggcctgcctcag
gcttacatcactgcagccacacctgttgttgcgaaccctgttgttgtccctaatggcaaa
gaggtcgctgtacctgagcctcatcagcctcatcagcctcatcaggctcatcaggttcat
caggttcatcatacgacgaatgcgatacagagttccacacaggtgcaactgcctgtcttt
tcaacagaggtggttgcacctccagctcctgtaatcaccccagcaccaaccagccctcaa
aatgcactgctgtctcctacatcagccctgcctccatactttatgaagggctctatcatc
caactggccgacggggagctcaagcgggtggaggacctgaggacagaggacttcctgcag
agcgcagaagttagcggtgaactgaaaatcgattcaagcacagtcgagcggatagacacc
agcagaactcctgacgcagtcatcatacagttctcagttggcgaacacaaagcacaggtg
tgtgtggaggtgctggtggagtaccctttctttgtgtttggtcagggatggtcgtcctgc
tgtccggaccgcactacccagttgctagctttgtcctgtgctaagctctcagtgggtgac
gtgtgcatctccctcactctgaagagcctgaggaatggtgctctgagtaaagaccaaact
tttggcactttgaagaaccacaacaacattcatctgaaaacagccaagactaacggacag
gcaggagacaggccgactccgagagaggatcagaggaacgggaaggttttttttaggtca
gaaggggagcagagattggaaagcgccgggtttgagagtctcaactctgggaaaggagtg
atactctcgaaggatgaaggagaggggaaagctcaaatcgttgtcggacgcaagaggagg
tggtctgcccccgagaaaggggagataggaaggtcgcaggagagcgagccccctgaaact
ctgcccaaactgtccttcctctcgcaggagattaaggtaaacatagaggggaggtccagt
atggcggttcgtccttctgattcccagaagagacaaggcatcttctga
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