Astyanax mexicanus (Mexican tetra): 103029793
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Entry
103029793 CDS
T05042
Symbol
nipblb
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103029793 (nipblb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103029793 (nipblb)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
103029793 (nipblb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
103029793
NCBI-ProteinID:
XP_007244851
Ensembl:
ENSAMXG00000006890
UniProt:
A0A8T2L1A9
LinkDB
All DBs
Position
20:complement(4560661..4599494)
Genome browser
AA seq
2749 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLARRDDN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDMPVLLQTVLTRNPNIFREKSIMQQPMMPP
YKMSHNSMHGSPASTNYQQTTVTPSPPSRFVQPQTGSGARFMPQQNSPVPSPYAPQSPAG
YMQYPHPPSYSQHQQIQQVSVASPMVPGGIRNIHDSKVSGQMSSNSANHNARHCSNEEYM
NIVHRLGSEESDPSMRNASFPLRSPQSVCSPAGSEGTPKVGSRPPLILQSPPPYTSPRDA
APDLLMDSPDRKKKQKKMIKEEGDKGAMYDIVSSPSKDSTKLTLKLSRVKSSETDQSTDL
MPSVEHGSDAENELPCNSLPYPRNPQERLAAGQCPPEQSGYQQVPVLQNTGTVTAKQPGG
VSGTPYDEAEMDALAEIERIERESAIERERGSKEVQDKDKPLKKRKQDSYPQEPGAGGTA
GATGGPGVGGGGSAGNKLAPQEASAASNGTNRPALMVSIDLQQAGRAEGQLDSCPTPALE
AQRWPEDGSDSAGVLRLKSKTDGEAQRAVDGRPEVIKQRAETPQKTASEGRPETPKHKHD
SRRDSTSKTQGSDKRSDASKHRHDGKPEKVRSEGRGTDTPRKHESRSEVSRDSHREEKHK
DRERNKDRDREKDKDKDRDRERDKDKEKEKEKDKEKDKEKEKEKDRDNDAVKVRRPDTPK
GKVEHDRHGRDKERDRENRDRGNRDRENRDRDRENRERKHRTESKEHKEKRSPEQRSRPD
SPRVKQENKQRSDRSERSERSDRLERSDHTDRSERSERSDRTDRSERSERSDLKSSNNKE
EKRSSDGNRHRSDDSKQSSTDSKAAEFPDYLLGVKSGALKNFVIPKLKRDKDGNVPPAAT
APTSAATPAEIPRPESWGQPRVKLERLGLVENISKRPKPVVVLQKLSYDEVQKIIKERHS
RSSKSSKNRSSFGKSSKGGIDESVLKELPPHLLAEIESTMPLCERVKMNKRKRSTVNEKP
KYAEVSSGEDSASVESAPKRSKKDRDRTWECEEKDRKGERRRSGGHHDGRRGSGSRYRDQ
SSDDSDEGTPPPSMSEIARKMKMKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASVDNILE
NLEDVDLSLAADDDEIPQELLLGKHQLSELGSESAKIKAMGITYRISSEKLVKVLGILEK
NIQDGSKLSTLMNHGNDAEDEERLWRDLIMERVTKSADACLTALNIMTSTRMPKAVYIED
VIERVLQYTKFHLQNTLYPQYDPVYRVGPHGGGMLSSKAKRAKCSTHKQRVIVMLYNKVC
DIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQL
ILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPNDKDNT
DDEYDKKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENFVQDLLSTV
NKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDAVTSKMDQRS
IDRILKETPGNDETQQLQKALLDYLNENIDTDPSLVFSRKFYIAQWFRDSTTETEKAMKS
QNQKDDDSSEGQHHTKDVETTGEIMQRAEARKKFLRSIIKTTPSQFTTLKMNSDTVDYDD
ACLVVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARLDM
QRGVHGRLMDNSTSVREAAVELVGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVIKIL
RDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKEAMTRKILN
ITDVVSACKDSGYDWFEQLLQNLLKTEEDASYKPARKACAQLVDNLVEHILKYEEAPDDC
ENKGGNSNRLVSCITTLYLFSKNRAQLMVKHAMTMQPYLTTKCNNQNDFMVICNVAKILE
LVVPLMDHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTHNYKFVWACFNR
YYGALNKLKTQHQEDSNSTVLVSNKPALLRSLFTVGALCRHFDFDLEDFKGNNKVVIKDK
VLELLLYFTKNEDEEVQSKAIIGLGFLFIQHPGLMFVPEVKTLYNGLLSDRKTSVNLKIQ
VLKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFH
TQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTMRNKADQQLVEIDKKYTGF
IHMKAVAGMKMSYQVQQAIMASKDTIIRGFRQDENSSALCSHLFTMVRGNRQHRRAFLIS
LLNLFDDSAKTEVNMLLFIADNLACFPFQSQEEPLFIMHHIDITLSVSGSNLLQSFKESL
LKEPRPREKKRKKKVREKKYSSDEEDEDESSSSSSSSSDEDEVVHRAKRPKRAAANVDSD
SDLDVEDVEKVMDRLPDNPLPLLDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTE
SAKVYDKAVNRKNNVHFNPRQTLEFLANGLSNAELTDDIKRKIVKQYLDFKVLMEHLDPD
EEDEEGEASASTHARNKAITALLGGSSPKNNAADSYDEESDGEEKAPGASRRSRRGGDSA
DASGHLNETVEAMDVIAICCPKYKDRPQIARVIQKTSNGYSVHWMAGSYSGTWAEAKKRD
GRKLVPWVDTIKESDIIYKKIALTSAHKLTNKMVQTLRSLYAAKEGTSS
NT seq
8250 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattaccactctcgctgggattgctagcctcact
gacttgttaaaccagcttcccttgccttcccctctccctgcaaccaccactaagagcctg
ctgtacaatgggaggattgcagaggaggtcaactgtctcttggctcgcagggatgacaac
cttgtctcccagctggcccacagcctcaaccaggtctccaccgagcacatagagctgaag
gacaatctgggcagtgatgacccagagggagacatgccggtgctgctgcagacggtgctg
accaggaaccccaacatcttcagggagaaaagtataatgcaacagccaatgatgccgcca
tataaaatgtctcacaattccatgcatggaagcccggcatccacaaattaccagcaaacc
actgttactcccagccctcccagtcgcttcgttcagcctcagacgggctctggggctcga
ttcatgcctcagcagaacagccctgtacccagcccctatgctccacagagtcctgccggc
tacatgcagtaccctcaccctcccagctactctcaacatcaacagatccaacaagtgtct
gttgcaagtcccatggtgcctggtggcattaggaacatccacgacagtaaagtctctggg
caaatgtcaagtaattcagccaatcacaatgcacggcattgctccaatgaagagtacatg
aacatcgtccacagattgggaagtgaggagagtgatccttccatgagaaacgcttccttc
cctctccgatcgccccaatcggtatgctcgcctgctggaagcgaagggactccgaaagtt
ggatcgcggccacctctcattcttcagtctccgcccccgtatacctcaccgcgggatgct
gctcctgaccttctcatggactcacccgaccggaaaaagaagcagaagaaaatgatcaag
gaggaaggagacaagggcgccatgtacgacattgtcagctctccctccaaggactctacc
aagctcacgctgaagctgtcgcgggtcaagtcttctgagacagaccagtcgaccgacctc
atgcccagcgtggagcatggctcagacgctgaaaacgaactgccctgcaacagcttgccc
taccccaggaacccccaggaacggctggctgcaggccagtgccccccagaacagtcagga
taccagcaggtccccgtgctgcagaacactgggacagtcactgcgaaacagcctggagga
gtcagcgggacgccgtacgacgaggccgagatggacgcgctggctgagattgagaggata
gaacgggagtcggctattgagcgagaacgaggctccaaagaggttcaggataaagataaa
cctctgaagaagcgaaaacaggactcgtaccctcaggagcctggtgctggtggtactgca
ggagcaacaggtggtcctggggtgggaggcgggggtagtgcgggaaacaaattggcacct
caggaggctagcgctgccagcaatgggactaacagaccagccctgatggtcagtatagac
ctacaacaggcaggcagggcagaggggcagctcgactcctgtcccacacctgccctggag
gcacagcgctggcctgaagatgggtcggactcggctggggttctgcggctcaaatcaaaa
actgatggagaggcgcagagagcggttgatggtcggcctgaggtcatcaagcaacgagca
gaaacgccacagaaaaccgcttcagaaggccgtccggagacgcctaaacacaagcacgac
agccgacgggactctacaagcaagacgcagggatcagacaaacggtcagatgcatcgaaa
catcggcatgatggtaaacctgaaaaggtccggtctgaaggacgaggcacagatacgcca
cgaaaacacgaaagtcgctccgaggtctctcgggacagccacagagaggaaaaacacaaa
gaccgggagaggaacaaggacagagaccgagagaaagacaaggacaaggacagagaccga
gagagggacaaagacaaggaaaaagagaaagaaaaggacaaggaaaaagacaaggaaaaa
gagaaagaaaaagaccgtgacaatgatgctgtcaaagttcgtaggccagacacaccaaaa
ggtaaggtggaacatgaccgacatggacgtgataaggaacgggatcgggagaaccgagac
agagggaatcgggacagagaaaaccgagaccgggatcgtgaaaaccgagagagaaagcac
cgaaccgagtccaaagaacacaaggagaaacgttcacctgagcagcgttcacggccagat
agtccccgggtaaaacaggagaataaacagcgctctgaccgctcagaacgctcggagcgc
tctgatcgcttggaacgttctgatcacaccgatcgctcggaacgatctgagcgctctgat
cgcactgaccgatcggaacgctctgaacgttctgacctaaaatcctccaacaacaaagag
gagaaacgaagctctgatggtaacagacaccgctctgatgacagcaagcagtcctccacc
gatagcaaagctgccgagttccctgactacctgctgggtgtcaagtctggcgcactgaag
aattttgtcattcccaaactgaagcgtgataaagatgggaacgtgccaccagcagcaaca
gcaccaacttcagcagcaacaccagcagaaatcccacggccagagagctggggtcagccg
cgagtcaaactggagaggttgggtctggtggagaacatcagcaaacggcccaagcctgtg
gtggtactacagaagctctcctacgatgaagtgcagaagatcatcaaggaacggcactct
cgcagctcaaagtcaagcaagaatcggtcgtcctttgggaagtcttcgaaaggggggatt
gatgagtcggtgctcaaggagcttcctcctcatctgcttgcagaaatcgagtccaccatg
cctctttgtgagagggtgaagatgaacaaacgcaaacggagtacggtaaacgagaagccc
aagtatgctgaggtcagctctggtgaggacagcgcctccgtggaatcggctccgaaacgg
tcgaaaaaggatcgggaccggacgtgggagtgtgaagagaaggaccggaaaggggagcgc
aggcggagtggaggacatcatgacggccgtagaggatcaggcagccgatacagagaccag
agttcagacgactcagacgaaggcacgccccctcccagcatgagcgagattgcccgaaag
atgaagatgaaggagaagcagaagaagaggaaagcttatgaaccgaagttaactccagaa
gaaatgatggactcctcgacgtttaagaggttcactgcaagtgtggacaatatattagaa
aacttggaggatgtggacttatcattagctgcagatgatgacgagatccctcaggagttg
cttcttgggaagcaccagctgagtgagctgggcagtgaatcggccaaaatcaaagccatg
ggcatcacatacaggatttcgtccgagaagcttgtaaaggtgctgggaatattagagaag
aacattcaggatggatccaagctctcaacacttatgaaccatggcaacgatgcagaggat
gaggagcgcttgtggcgtgacctcatcatggaacgggtgaccaaatcagctgacgcctgt
ctgactgcgctgaacatcatgacctcgacacggatgcccaaagctgtctatatcgaggat
gtgatcgaaagggtgctacagtacacaaagttccacctgcagaacaccctctacccccag
tatgaccctgtctacagagtgggccctcatggaggtgggatgctgagctcgaaagccaaa
cgagccaagtgctccacgcacaagcagagggtgattgtcatgctctacaacaaagtatgc
gacatcgtcagcaacatttctgagctgttggagatccagctcctgacagacactacaatc
ctgcaggtctcttccatgggaatcactccgttctttgtggagaatgtcagtgaactgcag
ctctgtgccatcaagctggtgaccgcggtcttttcccggtacgagaaacacaggcagcta
attcttgaggagatctttacatctctagccaggctgcccaccagcaagaggagcttaagg
aacttcaggttgaacagcagtgatgttgatggcgagcccatgtatatccagatggtgact
gctctggtgcttcagctcattcagtgtgtggtgcatctgcctaatgacaaggacaacact
gatgatgagtatgacaaaaaggtggaccaggatgtcctcatcacaaactcctatgaaact
gcaatgagaacggcacagaacttcctatcagttttcctcaaaaaatgtggtagcaaacag
ggagaggaggactaccggcctctgttcgagaactttgtgcaggatctcctctcgacagtg
aacaagcccgagtggccagctgctgagctgctcctcagtctcctgggccggttgctggtg
caccagtttagtaacaagcaaactgagatggcactgagagtggcatctttggattacttg
ggcacagttgctgcacgtctaaggaaggatgcagtcaccagcaagatggaccagcgctcc
atagaccgcatcctcaaagagacgcctggaaatgacgagacgcagcagctgcagaaagcc
ttgttggactacttgaatgagaacatagacactgacccttctcttgtgttttctcggaag
ttctacatcgcgcagtggtttcgggacagtaccacagagactgagaaggctatgaagtcc
caaaaccagaaggacgacgactcgtccgagggccagcatcacaccaaggatgtggagact
acgggcgagatcatgcagagagctgaggctcgcaagaagttcttgcggtccataatcaag
accacgccctctcagttcaccacactaaaaatgaactctgatacagtggactacgatgat
gcctgtttagttgtgcgatatttggcctctatgaggccgtttgcacagagctttgatatt
tatttaacgcagatcttgagagtgctgggcgagagtgccatcgctgtgagaacaaaagcg
atgaagtgtctgtctgaggtggtggctgtggatcccagcattctggcccggttggatatg
cagcgtggagtccatggacggttgatggataactcaaccagtgtacgagaagctgctgta
gagcttgttggaagatttgtactgagtcgcccccagctaaccgagcagtactatgacatg
ctcattgagagaatactggacacgggaatcagcgtgaggaagagggtgattaagatcttg
cgagacatctgtctggagcagcccacgttcaacaagatcacagagatgtgtgtgaagatg
atccggagggtcaacgacgaagaaggcattaagaaactggtgaatgaaacattccagaag
ctctggttcaccccaactcccaaccatgacaaggaagccatgaccaggaagatcctcaac
atcactgatgtggtatctgcatgcaaagattcgggttatgactggtttgaacagctgctt
caaaatctgctaaagacagaggaagacgcttcctacaagccagccaggaaggcttgtgct
cagcttgtcgacaatctagtggaacacattctcaaatatgaagaagctccagatgactgt
gagaataaaggggggaactcgaatcgcttggtgtcctgcatcaccacgctatacctgttc
agcaagaaccgagcacagctgatggtgaaacatgccatgaccatgcagccctatctaact
accaagtgcaataaccagaacgattttatggtgatttgtaatgtggctaagatcttggag
ctggtggtgcctctcatggaccaccccagcgagaccttcctcaccactatcgaggaagac
ctgatgaagctcatcatcaaatacggcatgacggttgtgcagcattgcgtgagctgcctc
ggagcagtggtgaacaaggtcactcacaactacaagtttgtctgggcttgttttaatcga
tattacggggctttaaacaaactgaagacccagcatcaggaagactcaaacagcacagtc
cttgtgtccaacaagcctgcgctgcttcgttccctcttcactgtgggagctctgtgcagg
cacttcgacttcgaccttgaggattttaaaggcaataacaaggttgtcattaaggacaag
gtgctggagcttctgctctacttcaccaagaatgaggatgaggaggtgcagagcaaggcc
attattggtttaggtttcctctttatccagcaccctgggctgatgtttgtccccgaggtg
aagaccctgtacaacggcctcctctcggacaggaagacgtcagtaaacctaaaaatccag
gtgctgaagaatctgcagacgtacctgcaggaggaggacacgcgcatgcaggaggctgac
agggagtggaaaaagctttccaagcaagaggacctcaaggagatgggggatatctcctca
ggaatgagtagctcaatcatgcagctgtacctcaagcaggtgctggaggccttcttccac
acgcagtccagcgtacgacactttgccctcaacgtcatcgccctaacactcaaccagggt
ctcattcaccctgtacagtgtgtaccctatttaatcgccatggggaccgatccagaacct
acaatgaggaataaagcagaccagcaactggtggagattgataagaagtacacaggattt
attcatatgaaggctgtggctgggatgaagatgtcctaccaggtccagcaggccatcatg
gcctctaaggacacaatcatcagaggtttccgtcaggatgaaaacagctcagccctctgc
tctcacctttttacaatggtgcggggaaacagacagcaccggcgagccttcctcatctcc
ttgctcaacctgtttgacgacagtgcgaagacggaggtgaacatgttgctgttcattgca
gacaacctagcgtgtttccccttccagagccaagaagagcctctcttcatcatgcaccac
attgacatcacgctgtccgtgtctggcagcaaccttttacagtccttcaaagagtcttta
ctaaaggaaccaaggccgcgagaaaagaaaaggaagaagaaggtgcgagaaaagaaatac
agttcagatgaggaagacgaagatgagtcgtcaagcagcagcagcagcagcagcgatgaa
gatgaggtggttcacagagccaaaaggcccaagagggctgcagcaaacgtggactccgac
tccgacctggatgtcgaagacgtggaaaaggtcatggaccgtctgccagacaacccgctc
cctctgctggatttcgccaatgcctctcagggcatcctgcttctcttggtcctcaaacag
catctgaagaacctttatggcttctcagatagcaaaatccagaagtattctccaacggag
tcagcgaaggtgtatgacaaggcagtaaacaggaaaaacaacgtgcatttcaacccacgg
cagacgctagagttcctggccaacggcctttcaaatgccgagctcacagacgacatcaag
aggaagattgtcaagcaatacttggactttaaggtactgatggagcacttggaccctgat
gaggaggatgaggaaggcgaggcgtcagccagcacccacgccagaaacaaagccatcact
gctcttctgggaggctccagcccgaagaacaacgctgctgactcttacgatgaagaaagc
gacggagaagagaaagcacctggagcatcacggcgatccaggagaggcggcgactctgca
gacgcatcaggtcatttgaacgagacggtagaagccatggacgtcatcgctatctgctgc
cccaagtacaaggaccggccgcagatagcgcgcgtcatccagaagacgagcaacggttac
agcgtgcactggatggccggctcctactccggcacttgggcagaggccaagaaacgagac
ggacgcaaactggtgccttgggtggacactatcaaggagtcggacatcatttacaagaaa
atcgccttgacgagtgctcacaagctgactaacaaaatggtgcagactttacgatcactg
tacgcagccaaggaggggacttccagctaa
DBGET
integrated database retrieval system
