Astyanax mexicanus (Mexican tetra): 103029806
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Entry
103029806 CDS
T05042
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X2
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
103029806 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103029806 (slc24a1)
Transporters [BR:
amex02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
103029806 (slc24a1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
NOA36
Motif
Other DBs
NCBI-GeneID:
103029806
NCBI-ProteinID:
XP_007249223
Ensembl:
ENSAMXG00000003180
LinkDB
All DBs
Position
9:23573935..23598298
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AA seq
762 aa
AA seq
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MYLTRRKRLQLSRIIFLLSGVLLCCIYQLTIRTRLPEPWPEPQIGEEPEDDPEDSLEKPT
QGLMQEPGVTTKLTTTTSTTTTTTTTTTTTTALEALTHTDAVHPPETTATTMTPPKTETT
GTTELTTILTTNRTIIHCIYVDPDLPKPTPAPTPAPEITTPSLTTTAATPVQPPHIKGEY
PVDIFSVEDRRKGWVILHIFGMIYMFVSLAIVCDEFFVPTLGVITDKLEISDDVAGATFM
AAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCALFSREMLHLTWWPLFR
DVSFYIMDLIMLIIFFLDNTIMWWESVMLVGGYCLYVYFMKFNVQIERAFKSQISKHKNI
VKVISVEEPEKENGTSTEDNAPPEPPEDKNRLKLKPTLQRGGSSASLHNSTMRNTIFQLM
IHTLDPLGEATNAAGIIYVKFKDKAQILNNMARGKVEGKEKEKSGEGEDSKTEEAKDSKE
PEASKEEGSKDKAEGQKEEPESAAAAEGEDKGEGAEGSGGSEDSEEDSEEDSDEDSDDDD
DDEDEEDEDGEDGEENDEPLSLEWPETRRKQATYLFLLPIVFPLWLTVPDVRNPASKKFF
VITFLGSIVWIGVFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKG
LGDMAVSSSVGSNIFDITVGLPVPWLMYSSFHGLAPVAVSSNGLFCAIVLLFLMLLFVII
SIAVCKWRMNKKLGFTMFLLYFVFLVLSVMLEDRIIVCPVSI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaactcggagaaagagacttcagctgagccggattatatttctcctgtctggg
gttttgctttgctgtatataccaacttaccatcaggaccagactaccagaaccatggcca
gaacctcagattggagaagagccagaagatgacccagaggatagtttggaaaaacccact
caaggactgatgcaggaaccaggagtaacgactaagctgaccaccaccaccagcaccact
actactactactactactactacaactactacagcgctggaggccctaactcacacagat
gcggttcatccaccagagacaactgccaccaccatgacccctccgaaaacagagacaact
gggacaacggagttaaccacaatcctaaccacaaacaggacgatcatccactgcatctat
gtggacccagaccttccaaagcccactccagctcccacaccagctcctgaaatcactaca
ccttcactcacaaccactgcagccacccctgtacagccccctcacattaaaggcgagtac
cccgtggacatcttctccgttgaggatcggcgtaaaggctgggtaattctgcacatcttt
gggatgatatatatgtttgtttcgttggctatcgtgtgtgacgagttctttgtccctact
cttggagtcatcactgacaagctggagatttcggacgatgttgctggggcgacgttcatg
gccgctggaggctctgcccctgaactctttacctccttgattggcgtgttcatctcacat
agcaacgtgggtattgggaccatcgtgggttcagctgtctttaacatcttgtttgtcatt
ggaatgtgcgctctgttctcccgggagatgctccacctcacctggtggcctctgttccgg
gacgtgtccttttacatcatggacctcatcatgcttatcatcttcttcctggacaacacc
atcatgtggtgggaaagcgtaatgttggtggggggctactgcctttatgtctactttatg
aagttcaacgtccagatcgagcgtgcgttcaagtctcagatcagcaagcacaagaacatt
gtgaaagtcatctcagtggaagagcctgagaaggaaaatgggacatcaactgaggacaat
gcccctcctgaaccccctgaggacaagaatcgattaaagctaaagcccacactacagcga
gggggcagttcagcctctttacataacagcaccatgaggaacaccattttccagctgatg
attcacacactagatcctctgggtgaagccactaatgctgctggcataatctatgtgaag
tttaaagacaaggctcagattttgaacaacatggccagggggaaggtagagggcaaagag
aaggaaaaatcgggcgaaggtgaggacagtaaaacagaagaagccaaagattctaaagag
ccagaagcatccaaggaggagggctccaaggacaaggcagagggacagaaggaggagcca
gagtcagcagcagcagcagaaggggaggacaagggcgagggtgcagagggatcgggagga
tccgaagacagtgaggaggacagtgaggaagacagtgatgaggatagtgatgatgatgac
gatgatgaagatgaagaagatgaagacggtgaagatggtgaagagaatgatgagccattg
tccttagagtggccagaaaccaggcgcaaacaagcaacctacttgttcctgctgcctatt
gttttcccactgtggctcactgttccagacgtcagaaatcccgcatccaagaagttcttt
gtgattacattcctggggtccatagtgtggattggcgtattctcctatctcatggtgtgg
tgggcacatcaggtgggtgagaccattggcatttcagaagaaataatgggtctcaccatt
ctggcggctggtacatccatccctgacctaatcaccagtgtgatcgtggctcgtaaagga
ctgggagacatggctgtttccagctctgtcggcagcaacatatttgacatcactgtgggg
ctgccggtaccctggctgatgtattcctccttccacgggctggcacctgtggccgtcagc
agcaacgggctcttctgtgccattgtgctgctcttcctcatgcttctgttcgtcatcatc
tccatcgctgtgtgtaagtggaggatgaataagaagctgggcttcaccatgttcctgctc
tactttgtgttcttggtgctgagcgtcatgctggaggaccgtatcattgtgtgtccagtg
tctatctga
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