KEGG   Astyanax mexicanus (Mexican tetra): 103029843
Entry
103029843         CDS       T05042                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amex03009]
    103029843 (rrp9)
Ribosome biogenesis [BR:amex03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    103029843 (rrp9)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EML WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IP5PC_F ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_IFT140_1st WDR54 Beta-prop_RIG_1st VEFS-Box
Other DBs
NCBI-GeneID: 103029843
NCBI-ProteinID: XP_007254607
Ensembl: ENSAMXG00000006788
LinkDB
Position
24:28595158..28605151
AA seq 491 aa
MSDFFIKKRSGPAAPGRGEKSAGLRRKGDADGGKGGRKKLSKRMNEEISSDSENENDEGA
HKKQKGNVEDEEIDETPQEKKLRLAKLYLDQLREEEEKKAEDEEFESDLIAGRLHEDVLE
QRGKLQRLIADELVAPDPAEIRLLRGHQLPVTCLVITPDEKYIFSGSKDCSIIKWEVESG
KKVQKIPGGRKGTEKKHVGHTGHILCMAISSDGKYLATGDMNKLIMIWEAATCKHLYKFT
GHRDAVSGLAFRRGTHDLYSASHDRSIKVWNVNENAYVESLFGHQDTITALDCLGRERCV
TAGGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMVSGGDDGCVCVWAVHKKKPL
STVKQAHGLRGNPGLEMPNWVSSVAALNNSDTVASGASGSQNSAVQLWKCGQGYRSLEPL
FSIPLTGFVNSLKFSSSGKFLVAGVGQEHRLGRWWRIKEAKNGLYIIPLKRKNKEQMVDN
SKTQTEERPED
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtctgatttctttataaagaagagatccgggcccgcggctccggggagaggagagaag
agcgcggggcttaggaggaagggtgatgctgatggaggtaaaggaggacgaaaaaaactc
agcaagcgaatgaatgaggaaatatccagtgactcagaaaatgaaaatgatgaaggagct
cataaaaaacagaaaggaaatgtggaggacgaggagatcgatgagacgccgcaggagaaa
aagctgcgtctggcgaaactatacctggatcagctgcgagaagaagaggagaagaaggcg
gaggacgaggagtttgagtcagacctgattgctggacggttgcacgaggatgtgctggag
cagagaggcaaactgcagaggctgatagctgatgagctcgtagccccagaccctgcagaa
atccggttattgagaggacaccaacttcccgtcacgtgtctggtcatcaccccggatgag
aagtacatcttctctggatctaaagactgctccattattaagtgggaggtggagagtggg
aagaaggtgcagaagatacctggaggaaggaaaggaacagagaaaaaacacgttggacac
acaggacacatcctctgcatggccatctcttcagacggcaaatatctggcaactggagac
atgaacaagctgatcatgatttgggaagcagctacatgtaaacatctctacaagttcaca
ggacacagagacgctgtatcgggtttggccttcaggagaggaacacatgacctgtacagc
gcctcccacgaccgctccatcaaagtgtggaacgtgaatgagaatgcttacgtggaaagt
ctgtttggtcaccaggatacgatcacagctctggactgcctgggccgggagcgctgtgtg
acggccggtgggcgggatcgaacggtccgagtgtggaaaatagccgaggagtcgcagctc
gtcttccacgggcacgagggctccatcgattgcattcagctcataaatgaagaacacatg
gtgtcaggtggtgacgacgggtgtgtgtgtgtttgggccgtgcacaaaaagaagccattg
agcacggtgaagcaggcccacggtctccgtggcaacccggggctggagatgcccaactgg
gtatcgtcggtggcagccctgaacaactccgacaccgtggcctcaggtgcctcaggctcc
cagaattctgcagtgcagctgtggaagtgtggacagggctaccgaagcctggaacctctg
tttagcatcccattgactggttttgtgaatagtttgaaattctccagttcaggaaagttc
ctggtggctggtgttggacaggagcacaggctgggtcggtggtggagaataaaggaagct
aagaatggactctacatcattcctctcaaaagaaagaacaaagagcagatggtggacaac
agtaaaacacaaactgaggagcgtccagaggactga

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