Astyanax mexicanus (Mexican tetra): 103029873
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Entry
103029873 CDS
T05042
Symbol
arvcfb
Name
(RefSeq) ARVCF delta catenin family member b isoform X1
KO
K28154
splicing regulator ARVCF
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103029873 (arvcfb)
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103029873 (arvcfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
103029873
NCBI-ProteinID:
XP_049326400
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All DBs
Position
22:6897296..7275668
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AA seq
991 aa
AA seq
DB search
MEEYDVRSAASILASVKEQEARFERLTRALEEERRNVTLQLDRANLPCGDRLPWQQVVMQ
EQSPSNQTSLAMMQEPQEVVEETVTIEEDPGTPTSHVSVVTSDDGTTRRTETKDNSTNLK
VTKMVKTVTTRTVRQLPLGPDGLPLPEGSSPLGSYTDSIDRRFMKNGDRFVTPQATSTLT
RSYNNYNDSYGETPDSQYRHFALHDAYGDVADNYGSLSRGINYRPYRPYMPTGGYRMENS
YTTLPIRKEDYGHMAQPQVPMVSSTVDLNRSQPERFQPEPYGLEDDRRSLGPDDEEPYDL
EPDYSTANRRTLPGAVRTIREPLRDGPRVRGYDDPIEAELIDERHPYIPGMYSAPLAQPE
RGSMASLDRMGGRRSPSIDSIRKDPRWRDPDLPEVIAMLGHPIDPVKSNAAAYLQHLCYE
NDKIKKDVRQLKGIPVLVGLLDHPKAEVHRKACGALRNISYGKDNDNKVAIKNCDGIPAL
IRLLRKTNDMEVRELVTGTLWNLSSYEPLKMVIINHGLQTMTNEVIIPHSGWEPEPNEDS
KPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDMDNKSV
ENCVCIMRNLSYHVHKEVPGADKFQDPSGLQAPGSAGPQRKKKDDAGCFGGKKAKEEWFN
QGRRNGENDKNYDTLDLPKRTEPTKGYELLYQPEVVRLYLSLLTESQNYNTLEAAAGALQ
NLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSDKVVRAVAIALRNLSIDRRNKDLIGS
YAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIVTDSSENARSLISAQAIDKLVAIN
RTSQSARETKAASHILQTVWSYKDLRNTLTKDGWSKTHFQPTASGAPKGSKSGKPGYDDT
TLPLMEKNQGDRGCGGGAMIPMDELGPDGYSTIDQRDKDCKYKGSDGSSDLTEREPLKND
TNRKHYIRSNRPTVSLVDACDVKPQPVDSWV
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtacgacgtgcgttcagccgccagcatcctggcctcggttaaagagcaggag
gctcgtttcgagcggctgactcgagccctggaggaggagcggcgcaacgtcacgctgcag
ctggaccgcgccaacctgccctgcggtgaccggctgccctggcaacaggtggtgatgcag
gagcagagtcccagcaaccagacgtctctggccatgatgcaggagccacaggaggtggtg
gaggagacggtcaccatagaggaggaccccggcacgcccacgtcccacgtctcagtggtg
acgtccgatgacggaaccactcgccgcacagagaccaaggacaattcaactaacttgaag
gttaccaagatggtaaagacggtgaccacccgcacagtccggcagcttccgctgggtcca
gatggccttcctctgcccgagggttcctctccactggggagctacacggactccatcgac
cgacgcttcatgaagaacggagatcgcttcgtcaccccgcaggccacctccaccctcaca
cgctcctacaacaactacaacgactcgtatggcgagacaccggacagccagtaccgccac
ttcgccctgcacgatgcctacggagacgtagccgacaactacggcagcctgtctcgtggc
atcaactaccggccctaccggccctacatgcctactggaggataccggatggagaacagc
tacaccaccctccccatccgcaaggaagactatgggcacatggctcagccgcaggtaccc
atggttagcagcactgtggacctgaaccgctcacagccagaacgcttccagcccgagcca
tatggattagaggacgaccgccgcagcctcgggccagacgacgaggagccatacgacctg
gaacctgattactccaccgctaaccgccgcacactgcccggcgccgtacgcaccatcaga
gaaccactgcgcgacggacctcgagtcagaggctatgatgatcccattgaggcggagctg
attgatgaaaggcacccttacatccccggcatgtactcggcacccctggctcagccggag
agaggaagcatggccagtctggaccgcatgggtggtcgacgctccccctccatcgacagc
atccgcaaggacccgcggtggcgcgacccagacctgcccgaggtcatcgccatgctgggt
caccccatcgacccggtcaagtccaacgccgccgcctacctgcagcacctgtgctatgag
aacgacaagatcaagaaggacgtgcggcagctgaagggcatccctgtgctggtgggtctg
ctggaccaccctaaagccgaggtccaccgaaaggcctgtggagcgctgcgcaatatctcc
tacggcaaggacaacgacaacaaggtggccatcaagaactgcgatggaatccctgccctc
atccgcctgctgaggaagaccaacgacatggaggtccgggaactggttacaggcacactg
tggaatctgtcctcctacgagcctctgaagatggtcatcatcaaccacggcctgcagacc
atgaccaacgaggtcatcatcccacactccggctgggagcccgaacccaacgaggactcc
aagcctcgggacgctgagtggaccactgtcttcaagaacacgtcaggatgcttacggaat
gtgagctcggatggtgcagaggcccgcaggaggctgagagagtgtgatgggctggtggac
gctctgctccatgctctacagtccgctgtagggaagaaggacatggacaacaagtctgtg
gagaactgtgtgtgtatcatgaggaacctctcgtaccacgtccacaaagaggtcccgggg
gccgataagtttcaggacccgtcaggactgcaggctccgggctccgcagggcctcagcgg
aagaagaaggacgacgccggctgcttcggcgggaagaaggccaaagaggaatggtttaat
caagggcggcgaaatggagagaacgataaaaactatgacacgctggacctcccaaagcgc
acagagcccactaaagggtatgagttgctgtaccagccggaggtggtgcgtctctatctg
tccctgctgacggaaagtcagaattacaacaccctggaggcagcagctggagcgctgcag
aatctcagtgcgggacagtggacctggtccaactacatccgtgccactgtgagaaaggaa
aagggtcttcccatcctggtggagttgcttcgctctgactcggacaaggtggtgcgagct
gtggccatcgccctgaggaacctgtccatcgaccgccgcaacaaagacctcatagggagc
tacgccatgagggacttggtcagtaatctgccgagtgggcagcagcgtcctgccaagaac
ctggaggaggacacggtggtggccatcctcaacaccatccacgagatcgtgactgacagc
tcggagaacgcccgctcactcatctccgctcaagccatcgacaagctggtggccatcaac
cggaccagtcagtcagccagagagaccaaggccgcctcccacatcctgcagaccgtctgg
agctacaaagacctgaggaacaccttgaccaaggacggctggagcaaaacccattttcag
ccgacagccagcggggcacccaagggatccaagagcggaaagccgggctatgatgacacc
accctacccctgatggagaagaaccaaggcgacagaggctgtggtggtggtgctatgata
cctatggacgagctgggtccagatggatattccacgattgaccaaagggacaaagactgt
aaatacaaaggaagcgatggctcatcagacctgacagagcgggaaccacttaagaatgac
acaaataggaagcactacattcggagcaacaggccaacggtcagtcttgtggacgcttgc
gatgtcaagcctcagcctgttgactcctgggtgtaa
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