Astyanax mexicanus (Mexican tetra): 103029971
Help
Entry
103029971 CDS
T05042
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103029971
03037 Cilium and associated proteins [BR:
amex03037
]
103029971
Transporters [BR:
amex02000
]
Other transporters
Pores ion channels [TC:
1
]
103029971
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103029971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3504
Motif
Other DBs
NCBI-GeneID:
103029971
NCBI-ProteinID:
XP_007258226
Ensembl:
ENSAMXG00000019762
UniProt:
A0A8B9K3F7
LinkDB
All DBs
Position
16:complement(11311038..11348203)
Genome browser
AA seq
1156 aa
AA seq
DB search
MSETAALTRPLTSSKRHKSVRKSCRRIYSPYQDNTGPSDDEDKDEERVDSNDPEELFQNI
QVQKEIIANIRTRPWPMRRKLKALKQAREIVLKYEGRLTRTRGYQAAGADLLKKISRVLY
NILVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLAGAPF
GTTRSKTIPKDQVASAQDLDTIWSLGGYLQYSVLFYGYYGNVRKIGSAGYRLPLAYFLVG
MAVFAYSFITLLRKMARNSRLSLASASDENYTFCWRIFCAWDYLIGNPEAAESKGAAIVN
NIREAIVEEQERKKETSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQQKAEL
TLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLGRVLVLYLGNLYSLIIAL
LDKVNSMSSGIQGNWSDSTSYLATISQPAETNLSTIVPEITEGRNTTFTTTVVDLNRTVI
SIKRALLSAPPAPALTLQNQTTSFGFNTKSQQDQCWETYVGQEMLKLSIIDMIFTVASIL
LIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAF
NVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRP
SQHCGPFSGQEKIYDIISETIDNDFPLWFSKVMGYVTSPVVVLPAVLLLFMLIYYLQAIA
RSLKFTNNQLRLQLQTERTDDKKKVFQLAAASLHSPEGGDKKPEQESDITSMESPARSTS
PPRRNGTVTNFQSPVRQGNSIRTITQSASRAEVRIAGASRSPSVPVRPKPRLEHIPNSAY
RMFGGPSIPQRQIHRVEYIPIPVRHPGYLGGMTGSCRSKSYQHMAYNPTMRYTENIHSDP
LFRKSLRPVRPEPGIVTAQSYIGRRAHTTRYVIVNEQEPRKKLIRSTTRIPRHYRLVDEP
EIVELYPRNIKRYIPRTPHRSQQPHLSEEEEEEEEAQAKNTGRRVSVGKSHRQRSLSDLH
QPARFYIGDTMDSRLAQSLYGGEEEEEDYGEDWEEESSHPKSSWVNLKAAETAHRHAEPH
VKPKSKRKGEPSLTESDSASLASSSDQQNSSTDQYIQVIHNKEKYLKHSGKLTKKKSKTS
EEINTTGSNDLVCSNV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacagcagcactgaccagacccctaacatcctccaaacggcacaaaagtgtg
aggaagagctgcagaaggatttattcaccttaccaggacaacacaggaccctccgatgat
gaagataaggatgaagagcgggtggacagtaatgaccccgaagagcttttccagaatatt
caggtacagaaggaaatcatcgccaacatacgaacacgaccgtggccaatgcgacgcaaa
ctcaaagccttaaagcaggccagagaaatcgtgctgaagtatgagggcagactgaccagg
actcggggctaccaggctgcaggggcagatctgctgaagaagatttcaagagttctctac
aatattcttgtgttgtttattccatgggagatgaggattaaaaagattgaaagtcacttt
ggatctggtgtggcctcctacttcatcttcctgcggtggcttttcggcattaatatcgtc
ctcaccataatgactggagcatttatcgttctgcctgagctgctggccggagctccgttt
ggcaccactcgcagtaagaccatccctaaagaccaggttgcctcggctcaggacctggac
accatctggtcacttgggggctatctgcagtactcagtgctcttctatgggtactatggg
aatgtgcgtaagatcggcagcgctggttaccgcctgcccctggcctattttctggttgga
atggctgtttttgcctacagtttcatcactctgttaagaaagatggctagaaactcgcgc
ctgagtctggccagcgcgtccgacgaaaactacaccttctgctggagaatcttctgtgcc
tgggactacctgatcggcaaccccgaggccgccgagagcaaaggagcggccatcgttaat
aacatcagagaagccattgtggaagagcaggagagaaagaaggaaacaagcctagcggtt
ctgatcagtctgaggatcttagccaatatcctggtgctgctgtctttggcaggcagtatc
tacatcatctactttgtggtggaccgctcgcagaagctagagcagcagaaagcagagcta
acactgtgggaaaaaaacgaggtgagtgtggtggtctctctcatcactatgatcgctcca
tctgcctttgagttggtggctcagctggagatgtaccaccccaggaccagcctccgcttc
cagctgggcagggtgctggtgttgtatcttggaaacctctacagtctgataatcgccctg
ttggacaaagtaaacagcatgagctctggtattcaagggaactggtctgattccacatct
tacctcgccaccatatcccagcctgccgagacaaacctgtctacgattgttccagagatc
acagaggggaggaatacgaccttcaccacaactgttgtagacttgaaccgtaccgttatc
agcatcaagagggctttactgtctgctccaccagcaccagcgttgaccctgcagaaccag
acgacttcgtttgggttcaataccaaaagtcagcaggaccagtgctgggagacgtacgtt
gggcaggaaatgctgaagctctcaatcatagacatgatctttaccgtggcgagtatttta
ctgatcgatttcattcggggcctggtggttcgatacctgagtgactgctgctgttgggat
ctggagagcaagtttcctgaatatggtgaattcaagatagctgaaaatgtccttcacttg
atatacaaccagggaatgatatggatgggggcgtttttctcaccttgtctgccagccttt
aatgtcctgaagctgattgggctcatgtacctgaggagctgggctgtgctcacctgcaat
gtgccacatcagcaggtcttccgagcctccagatcaaataatttctacctcgccatgctc
ctcttcatgctctttctctgcatgctgccaaccatcttcgcaatagtgaggtaccggccg
tcgcagcactgcggaccttttagtggtcaagagaagatttatgacatcatatcggagacc
atagacaatgacttcccgctgtggttcagtaaggtgatgggttacgtcaccagtccagtg
gtcgtcctgcctgccgttctgctgctcttcatgctgatctactacctgcaggccatcgcc
agatccctcaaattcaccaataaccagctgagacttcagctacagactgaacgcactgat
gacaaaaagaaagtgttccagttggcagcagcaagtctccactcccctgagggtggtgac
aaaaagcccgaacaggagagtgatatcaccagcatggagtcacctgcccgttccacctcc
ccaccacgccgcaatggcaccgtcaccaacttccagtccccagttcggcagggcaacagc
atccgcaccatcacccagtctgcctctcgggctgaagtcaggattgctggggcctccagg
agcccctctgtcccggtccgacccaaacccagactggagcacatacccaacagtgcttac
agaatgtttggcggcccctccattccccagaggcagattcacagggtggagtacattccc
attcccgtcaggcatccaggctatctgggtggaatgactggttcatgccgctccaagtcc
tatcagcatatggcctacaatcccaccatgcgctacacagagaacatccactcagatccg
ctcttcagaaagagcctcaggcctgtccggcctgagcctggcatcgtcacggcccagagc
tatataggtcgacgggcacacaccacccgctacgtcattgtaaatgagcaagaacctcgc
aagaagctaattcgctccaccactcgcatcccacgacactatcgtctggtggacgaaccc
gagattgtggagctgtaccctcgaaacatcaagcgctacatccctcgcacgccccaccgc
agccaacagccacacctcagcgaggaagaagaagaggaagaagaagcgcaggcaaagaac
acaggcagacgagtgtcggttgggaagtcccacaggcaaaggtcactttctgacctccac
cagcctgctcgcttttacatcggagacaccatggatagccgcctagcgcaaagcttatac
ggaggagaagaggaagaggaggactatggtgaagactgggaggaagaaagttctcatcca
aagagctcctgggtgaacctcaaggctgcggagacggcccataggcatgcagaacctcat
gtcaagccaaagagcaagcgtaagggggaaccatcgctaaccgaatctgattctgcctcg
ttagcatctagtagcgatcagcagaacagcagcactgaccagtacattcaggtcatccac
aacaaagagaaatatctgaagcacagtggcaagctaacaaaaaagaagtccaaaaccagt
gaagaaattaatacaactggatccaatgaccttgtatgctcaaatgtttga
DBGET
integrated database retrieval system
