Astyanax mexicanus (Mexican tetra): 103029973
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Entry
103029973 CDS
T05042
Symbol
lhx4
Name
(RefSeq) LIM/homeobox protein Lhx4 isoform X2
KO
K09374
LIM homeobox protein 3/4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103029973 (lhx4)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
103029973 (lhx4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Orbi_VP3
DUF7571
Motif
Other DBs
NCBI-GeneID:
103029973
NCBI-ProteinID:
XP_007237040
Ensembl:
ENSAMXG00000034589
LinkDB
All DBs
Position
12:complement(9322067..9342764)
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AA seq
451 aa
AA seq
DB search
MDGAERSARTHTATHARALTHTHTYPNTHAHPHTLHRTSPLPAGAREQERSLRSASPSAG
DGGVLPARARGAGQGARMMMQRAGQSADTRGQHQLPECAGCSQTILDKFILKVLDRHWHA
QCLKCSDCHTLLADRCFSRAGSVYCKEDFFKRFGTKCASCQQGIPPSQVVRKAQDFVYHL
HCFSCVMCSRQLATGDEFYLMEDGRLVCKSDYETAKQNDDSETGAKRPRTTITAKQLETL
KSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVK
RSRGSKAEKESSAEDGGLSDSELSFRDDQILSDLGHANSLYGSVGDVSGGGVMNGAFSLD
GGGPPYHELRAGSPYGLPQSPSSVSSLPGHTPLLSSLGFSMEGLTGAQPVGGQALRAGGP
TSDLSTGSSTGYPDFPTSPASWLDEMDHSQF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatggagccgagcggagcgcacgcacacacactgccacacacgcgcgcgcacttaca
catacacacacatacccgaacacacacgcgcacccgcacaccctgcaccgcacgagccct
ttaccggctggagcgcgcgagcaggagcggagcctaaggagcgcgagccccagcgccgga
gacggaggagttttaccggcgcgcgcgcgaggagcaggacagggggcgaggatgatgatg
cagcgcgcgggacagagcgcggacacgcggggacaacaccagttgccggagtgtgcgggc
tgcagtcagacgattctggataagtttattctgaaggttctggaccggcactggcacgct
cagtgtctgaaatgctcagactgccacactctgctggctgaccgctgcttctcccgcgct
gggagtgtgtactgcaaagaagacttcttcaagaggtttgggacgaaatgtgcctcctgt
caacagggcatccctccgtcgcaggttgttcggaaggcacaggacttcgtgtaccacctg
cactgcttctcctgcgtgatgtgcagccggcagctggccactggggacgagttctacctg
atggaagacgggcgactggtctgcaaatctgactacgagacagccaaacagaatgacgac
tctgagaccggagccaaacgtccccgcaccaccatcaccgccaaacagctggagaccctg
aagagcgcctacaagaactcgcccaaacccgcccggcacgtccgcgagcagctctcctct
gagaccgggctggacatgcgcgtcgttcaggtctggttccagaacagaagagcgaaggag
aagaggttgaagaaggacgccgggcggcaccgctggggtcagttctataagagcgtgaaa
cggagtcgaggcagcaaagcagagaaagagagctcagccgaggacggcggcctgagtgac
agcgagctcagcttcagagatgatcagatcctgtctgacctgggtcacgctaacagtctg
tacggcagcgtgggggacgtgtccggtggcggtgttatgaacggtgcgttctctctggat
ggcggtggacctccgtaccacgagctgagggctggaagcccctacggtctgccccagtct
ccgtcatcggtcagctccctgcccggccacacgcctctgctcagcagcctggggttcagt
atggagggtctgacgggtgcccagcctgttgggggtcaggcgcttagggctgggggtcca
acctccgacctgtccacggggagcagcacagggtacccagacttccctaccagcccagcg
tcgtggctggacgagatggaccactcccagttctga
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