Astyanax mexicanus (Mexican tetra): 103029987
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Entry
103029987 CDS
T05042
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103029987 (adamts13)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
103029987 (adamts13)
Peptidases and inhibitors [BR:
amex01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
103029987 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
ADAMTS_CR_3
TSP_1
ADAMTS_CR_2
Reprolysin
Adt-1
Reprolysin_3
Reprolysin_5
Reprolysin_4
TSP1_spondin
TSP1_CCN
Reprolysin_2
Peptidase_M10
CUB
Motif
Other DBs
NCBI-GeneID:
103029987
NCBI-ProteinID:
XP_049341830
LinkDB
All DBs
Position
12:complement(21516070..21557401)
Genome browser
AA seq
1550 aa
AA seq
DB search
MAGLVSLFLASVLVDTVLLTSEFSLEKDFLQSLQHQDLLYYFNTNSMTSVPDLQLVWVNC
SSRRPWQCSFQAQGEQFQLGQLTKDQLFFCPSSLEFTVNSTLSIIKRRENTCCERLYLQK
PENTQTLLSVCHGKLQGLLLFQPGKRKMSIQPLLQKHSDHLRNSVDHIAGVPHLMLTHPS
PVVKTHLKQSQSHHRIQRSFLGTEVSHLELLVVVGPDVHDVHKQDTERYILTNLNIASEL
LRDVTLGANMRVHLVRMIILTEAEPEIQISDNITSSLRSVCEWGHKVNPSNDTDPLHADL
LLYITRFDLVLPSGNKLVRGVTQLGGVCSSQWNCVITEDTGFDLGITIAHEIGHSFGINH
DSIANTCSGSGFIMASDGGYNSVDLTWSQCSRSQLLDFYSAGKAECVKDVPVVGGSQQQW
RPGLYYGVDDQCRIAFGRTATACSFNSNDMATCRVLSCHIIPGDRSSCTRLLVPLLDGTE
CGPNKWCLKGRCVSPSKLSSSMVVHGSWSSWYDFSPCSRTCGGGITFRKRECNNPRPAFG
GRECEGDGIEAELCHRQSCESTQFEFMAQQCSDTDHQPLLVSPHSDTVYSWIPAVGFSSG
DAQCKLVCRSREQEFMVSRGSQFIDGTRCEADDPVPTGMVTACLRGKCQEFGCDGVLHSR
KVEDLCGVCGGNSSTCQLISGSYTGGEAQEYVTFLILPVNASQVHVINWKPVFTHLAVLV
NGEYIVSGHGDIALNTTHPSPLEESHMIYLLYLTSDLLPQTEELTLSGPITDKIHIQVYR
KYGKEYGDVTSPNITYQYYMRDNIPMKKGAEGQWSTIISPCSVTCGTGIQKVTQECVDMN
TQEHLEEQLCGSSPPSPTRLQPCYLPDCPASWVLGEFGPCSTPCGSGEWVRSVACLQKQG
TETVTLPDSECSQIKPPVTETCNTHLCPARWQVSEPGECSAVCGPGEAPRTVLCVRNHRG
ADVEVDDSLCPLPKPSEHVTCVVDVCPIGWETQKQNHGSGSLSLMPRSRMKPVYVWSPVI
GHCTKTCGNGTQQIWFSCVDHQSRLDVPEFLCDRFSKPELYTQPCAQSPCPVMWRYMQGE
CSVSCGGGVARRVLYCSQQETEAMEVLLADSACLHVPRPLEVVVCNTEACPTRWQAGEQG
SCSVSCGLGVALRRVWCSQFNGGVETEVEEERCDVGKKPPLEVPCFPQACSFHWAMQEWS
ECSVSCGGYGIQSRTVSCRGPSSPLPVSPILCVHLPKPITIQACFSSDCSTPVSPTQELS
TVPTQAPVIRSRHRAWKIDLGKKRKPTTAAGTAISKLTSEVLPTVPVLESTTLPTQPAQL
TQSSICGQLFLQDSGTIDLQNVTERRCFIAIGRPLDEVIQIKIESSSLNCRHRENLALYE
RLSLRRFCEKMTGKLVTSRSNVLLVRQSRVSPGNGVLLSFRSEKNPKKTHHEDCDVQLFS
PSGLIENPVRNSSYSTFSSQSCRVFIDAPPALRINIRALSVFNTSSSDSTYVLMRDVDAV
KTTVFKGTQLFQWSSTGSRAEVEFHGEYQHKKGTFRAEYSYVKPEEAKLI
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcttgtgtcactctttctagcttcagtcctggtggacacagttctgttgaca
tctgagttttccctggaaaaggactttttacagtcacttcaacatcaagatctgttatat
tactttaatacaaattcaatgacatcagtgcctgatctgcagctggtgtgggtaaactgc
tccagcagaaggccctggcagtgctcttttcaagcgcagggtgaacagtttcagctgggc
cagctaaccaaggatcagctgtttttctgtccctctagcctggagttcactgttaattca
acactcagtataataaagagaagggaaaatacctgttgtgagcgactttacctgcagaaa
ccagaaaacactcaaactcttctctctgtgtgccacggaaagcttcaaggcctacttcta
ttccagccaggaaagagaaagatgtccatacagcctttgctccaaaaacattcagaccac
ttaagaaacagtgtggaccacatcgcaggagtgccacatctgatgctgacccatccctca
cctgtggtgaagacacacctcaaacagtcacagagtcatcatcgcatacagaggtcattt
ctgggaacagaagtgagtcatttagaactgctggtggtggtcggtcctgacgtccatgat
gttcacaagcaggacactgagagatacatcctcaccaacctgaatattgcttcagagttg
ttgagagacgtcactctgggggcaaacatgagagttcatctggtccgtatgattattctc
actgaggcagagccagagattcagatttctgacaacatcacctcttctctaagaagtgtg
tgcgaatggggtcataaggtcaacccctcaaatgacactgaccctctgcatgcggacttg
ctcctgtatatcaccaggtttgacctggtgctgcccagtgggaataaactagtgagaggt
gtgacgcagctgggcggagtctgttccagccaatggaattgtgtcattacagaagataca
ggctttgatctgggaatcacaatagcacacgagatcggacacagttttggcataaaccac
gatagtatagctaacacatgcagtgggagtgggtttataatggcatctgatggcggttac
aacagtgtggatctcacctggtcccagtgcagcagaagccagcttcttgatttctacagt
gcaggcaaggcagagtgtgtgaaggatgttccggtggtgggaggttctcaacagcagtgg
aggcctgggctgtattatggggtggacgatcaatgtcgcattgcgttcggaagaacagcc
actgcctgctcttttaatagcaatgacatggccacatgtcgggttctgtcctgccacatc
atccctggtgatcgcagctcctgtacccgactacttgtgccactgctggatggtactgaa
tgtggtccaaacaagtggtgtttgaaaggccgctgtgtatctccatccaagctgagctct
tctatggtagttcatggctcctggtcgtcttggtatgatttttccccctgttcacgtacc
tgtggagggggcatcacatttcgcaagagagagtgtaacaaccccaggccagcgtttggg
gggagagagtgtgagggagatggcatagaagctgaactttgtcaccgccagtcgtgtgag
agtacccagtttgagtttatggcccagcagtgctcagatacagatcatcagcctctcttg
gtgtctccacattcagacacagtctactcctggatacctgcagttggtttcagctcaggt
gatgctcagtgtaagcttgtatgtcggtctcgtgagcaggagttcatggtgagtcgaggt
tctcagtttatcgatgggacgcggtgtgaagcagatgaccctgtacctaccggcatggtc
actgcctgccttaggggaaagtgccaggagtttggttgtgatggggtgttgcattctagg
aaagtggaagacctgtgtggagtatgtggaggaaatagctccacctgccagttaatctct
ggctcctacacaggtggagaggcacaagagtatgtgaccttccttattctgccagtgaat
gcctcgcaagtacatgtgattaactggaagccagttttcacacatctggcggtgctggtg
aacggagaatatattgtgtctggacatggagacatagcgttaaacaccacccacccctcc
cctctggaggagagtcatatgatttatcttctttacctcacatctgaccttttaccacag
acagaggagctaactctgtctggaccaatcacagacaaaatccacatacaggtatatcgg
aaatatggaaaggaatatggagatgtcacaagtccaaacatcacataccaatactacatg
cgtgataatatcccgatgaagaagggcgctgagggccagtggtccaccatcatttcaccc
tgctctgttacgtgtggcacaggaattcagaaggtcactcaggagtgtgttgacatgaac
acccaggaacatctagaggagcagctctgtggctcaagtcctccaagcccaactcgtctg
cagccctgctatttacctgactgcccagccagctgggtgcttggtgagtttggtccctgc
agcaccccctgtggttctggagagtgggtgcgctctgtggcctgtctgcagaaacaagga
acagaaacagtcacgctgccggattctgaatgctctcagatcaaacctccagtaactgaa
acctgtaacacccacctgtgccccgccagatggcaagtctcggagcctggtgagtgttct
gctgtgtgtggcccaggtgaggctcccagaactgtgttatgcgtccgaaaccatcgtggt
gctgatgtagaggtggatgacagcctttgccctcttcccaaaccctctgaacacgtgacc
tgcgtggtggatgtctgccctatcggctgggaaacacaaaaacagaaccatggaagtggg
tccctgtctctgatgcctcgttccagaatgaaaccagtgtacgtgtggagccctgtgatt
ggccattgcactaagacctgtgggaatggaacgcagcagatatggttttcctgtgtggat
catcagtcacggctggatgtcccggagttcctgtgtgatcgcttcagcaagcctgaactg
tatactcagccctgtgcccagtcgccatgccctgttatgtggcggtacatgcagggagag
tgcagtgtgtcgtgtggaggtggtgtagccaggagggtgctgtactgctctcaacaggag
acagaagccatggaggtgctgttagctgactctgcctgtctacatgtccccagacccctg
gaggttgtggtgtgtaacactgaggcctgtccaacaaggtggcaagcaggagaacaaggt
tcatgttcagtgtcctgtggtctcggtgtggcactgagaagggtttggtgttcgcagttc
aatggaggggtggagacagaggtggaagaagagaggtgtgatgtaggcaagaagcctccg
ctcgaggtgccctgcttcccccaggcctgctccttccactgggccatgcaggagtggagt
gagtgttctgtctcttgtggtggttacgggatccagtcgaggacagtgtcatgtcgtggc
ccatccagccctctacctgtgagcccaatcctctgtgtccatctgcccaaaccaatcacc
atccaagcctgctttagctctgactgctccacaccagtcagccccacacaggagctcagc
actgttcctacccaggcaccggttatccgcagcaggcacagagcatggaaaatagacctg
ggaaagaagagaaagcctacaactgctgcaggaactgcgatcagcaaactgacctctgaa
gttctaccgacagtgccggttttggaaagcacaacactgccaacacagcctgcacagctg
acacagagcagcatctgtggacagctcttcctccaggactcgggcaccatcgacctacag
aacgttacagagagaaggtgtttcatcgctatcggccgtcctcttgatgaagtcatccaa
atcaaaattgagtccagttctcttaactgcagacacagagagaacctcgctctttatgag
aggctgtctctgaggcgtttctgtgagaagatgacgggaaaattggtaacatctcgttcc
aacgtacttttagtgcgccaaagccgcgtcagccctggtaacggggtactgctgtccttc
aggagtgagaagaacccaaagaagacccatcatgaagattgtgacgtccagcttttctct
ccgtctggtctgattgagaatcccgtcagaaattcatcatactcgactttcagctctcag
tcttgtcgagtgttcatcgatgccccccctgcactgaggataaatatcagagctctgtct
gtgttcaatacgagctcctcagattctacatatgttctgatgcgggatgtggacgctgta
aaaaccacagtctttaaagggacgcagcttttccagtggagttctacaggaagcagagct
gaagtggagttccacggggaataccagcacaagaagggaacgttcagagcagagtattcc
tatgtgaagccagaggaagctaaactcatctaa
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