Astyanax mexicanus (Mexican tetra): 103030007
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Entry
103030007 CDS
T05042
Symbol
ralgapa1
Name
(RefSeq) ral GTPase-activating protein subunit alpha-1 isoform X1
KO
K25768
Ral GTPase-activating protein subunit alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103030007 (ralgapa1)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
103030007 (ralgapa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rap_GAP
RALGAPB_N
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
103030007
NCBI-ProteinID:
XP_049320004
LinkDB
All DBs
Position
14:852632..1030749
Genome browser
AA seq
2607 aa
AA seq
DB search
MFSKKPHGDVRKSMQKVLDPKKDVLTRLKHLRIVIEVAEPAELKHFFDQNYSHIYYVFFE
NFVSIEVILKQKGHKSQREELDSILFIFEKILQLLPERIHRRWQFHSIGLILKKLLHTGN
SLKIRREGVRLFLLWLQALQCNALKEQLWIFAALIPGFPAPPQSDLGPRTLENIITPTLN
LQEAQVTPEEISPLVLPQSGDKAQEDLTGYFLEALLKYMVNQAKSLEWRCKENHEKGFAF
LFANFKKFYLPHIFPNFSKETSLYNPILDVPPLRPKPYYVVIKRDPETNEALYCTKENFL
NSRVIFIRWLVSFWLEPRATSGSHIPGVEGENVPKNIQRAAAGLAGRVEDSGPRPDALEG
GGVCGEPEQSHSNTSTLTEREPSSSSLCSVDEEHLTDIEVVRRVLCSSRTNVNFITEIFR
QAFLLPMCEAAAMRKVVRVYQEWISQEEKPVFMAEPEEEEEEERCMGKGDGPDIQPEGSG
RCRNPGWSKGSDSELLEYSVNAGSQATLQVFVTNSSNVFLLEPANELKTLLEEHVDMCKR
VLNIYRSLVMHQTMEQKTWEQILLVLLRVTECVMKRPPSIMPHGKKSNTLSGRLAGAIFQ
TLIVAWIKGNLNVYISRELWDDLLSVLSSLTWWEELVTEWSLTMETLTKVLARNLYSLDL
NELPLDKLSEQKLKKHKGKGGAHEGQKMVVDRSFSKGWSRDPPGQAVAMRQRSATTAGSP
GIEKARSIVRQKTVALRSCSTGDSLLSSAFIRSAKSAPVLVHPAHPLLPDSVLTPLADHL
PDLEEPVLAPRGPRARHSSQSEESAAAEVFSAAVSAAAAELEQPPLPRSSSASDIMEPFI
NERVKGALPVSDSPSHTPHPSSSSNTSTFNTTNTTAPTDPPQCPQCPQCPQTADPPSSES
RASSLEVGDSIYDHLCQMLPGPQPPFVPDWTCLAATPATPTIPDTPAKHAPLAEDDLLSS
LREYFMLRDTAYPGEAGFGSLDAEAEAESIVERGGVLDDKEIDASEQSFYDCLEHCDWVS
TCTQIKSSETNQTNRSDQNRSSEEQTSNQNQSLADDRRDSDSRLHRQDATDRSGEMEPIS
QHPQSTFRPRLNRGGSKKRQSGGGGGSGGGSGGGGGGGSSGSSSGGGVHVSFRPSTESVH
FLNPLDPKEAHWKVRLRRLSHFSGQSAGSKLRDGSGGGGGSGGEADAAPHRPGRIGRPSL
PRTRASRSRSQESGCSPSRQQVALLGGVYKSVVHALSKPKSQSAAGPSHGAPTKPPPDAP
LKDLYSHVMGYFGRRAAANNKDELPQKVRPVSTDVGSSNPNVSDLMDEFIQERLRARGTS
GMTRRGSSPGSLEIPKDFPDVLTRSNATRPADDPGVPSEWTSPASASGSDIISSDSQSDS
FNAFQYDNKYENFSFAPEALGSAEQEGGTGNTLDEPDHASLTTLHIDSETSSLSQHGLSA
DTVTITGSESASPLHSLGGSRSQTPSPATLTAEHTKHKDLQLDEKLHHSVLQTPDDLETS
EFPTEDCSVMAGGSLTGWHADVATVMWRRMLGILGDVNSIKDPEIHAQVFDYLCELWQNL
AKIRDNLGISLDNQTSPPPPDLIPPLRILTPWLFRATMLSERYKQGKLHAYKLICKIMKR
RQDVSPNSDFLTHFYNIMHYGLLHQDQDIVNTIIKHCSPRFFSIGLPGATMLILDFIVAA
SRVTACSSLNAPRVEAQILLGSLVCFPNLYEELPALHPTTADVIMTKFKDVKEHIIKHIL
ASARDEPSAPARCVALCSLGIWLSEELIHGTRHPQIKEALNVICVTLKFPNKTVALVASD
ILHLLINYVDHLQAFPPDMPKKIVEILIATITYLLPSTESSPHELDKRLVVSLLLCLLDW
VMALPPKTLLQPVQTLVLDKDKADKSVLSAIYKVLHGCVYGAQSFSSARYFPLSLSDLSS
PDYDPFLPLEGLKEPEPLHSPDSERSSKLQPVTEVRSRIQQGLISIAARTVISHLVNHLG
HYPMSGGPATLTSQVCENQDNPYCDSSDLAPELFHTPNLQFFVLNGTTLLSCLQIRAQDG
LPGGGMAAGLTSANACVRVIVRDISGKHSWDSAVLYGPPHCAAPSQPIHFPTPSSGPAGG
DGESSAEGEGLEREEEENEEENEEILESEEMQREQEDEELEEEEQEAELDEEEEAVLELM
APLAKRRCREAVPSWDALQDGEDGEDALDEMLQYLGYSSPECLQRTGMPLNIPAPPPACV
SEKQENDVINAILKQSAEEREFSLHRGNDVHMRAAAQPEPRPQRPQSAFYYCRLLLNILG
MNSWEKRSNFHLLKKNEKLLRELKNLDSRQCRETHKIAVFYVAEGQEDKHSILSNTSGSE
AYEDFVSGLGWEVNLTSHCGFMGGLQRNKSTGLTTPYFATSTVEVMFHVSTRMPPDSDDS
LTKKLRHLGNDEVHIVWSEHTRDYRRGIIPTEFGDVLIVIYPMKNHMYSIQIIKKPEVPF
FGPLFDGAIVDGKILPTMVRATAINASRALKSLIPLYQNFYEERARYLETIVQHHLESST
FEDYAARLFCPAPFQPMPSETERDGVMFLLLPAPPLERAGLMKVKGKGLKRKVFHASCEW
LLPREPGRKPQRSSRRQRLSLAHVSSG
NT seq
7824 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaaaaagccgcacggagatgtgcggaaatccatgcagaaggttctggaccca
aagaaggacgtgctgacccgtctgaagcacctgcggatcgttatcgaagttgctgaaccg
gctgaactgaagcacttcttcgatcagaactactcccacatttattatgtgttcttcgag
aacttcgtcagcatcgaggtcatcctgaaacagaaaggtcacaaatcacaaagggaagag
ctggactccattcttttcatttttgagaaaattttacagctgttaccagagagaatacac
agacgatggcagttccacagcatcggcctcatactgaagaagctgctgcacacggggaac
tccctaaagatccgcagggagggtgtacggctgttcctgctgtggctgcaggctctgcag
tgtaacgctctgaaggagcagctatggatcttcgctgctttgatcccaggattcccggct
ccaccccagtccgacctcggcccccggaccctggaaaacatcatcacccccaccctcaac
ctgcaggaggctcaagtgacgccggaggagatcagtcctctggttcttcctcagtctggg
gataaagctcaggaggatctgactggatattttctggaggctcttctcaaatacatggta
aaccaggctaagagtctggagtggaggtgtaaagagaaccatgagaagggcttcgctttc
ctcttcgccaacttcaagaagttttatcttccccacatcttccccaacttctccaaagag
accagcctctacaaccccatcctggatgttccccctctgagaccaaagccgtattatgtg
gttataaagcgagacccggagacgaatgaagctttatactgcactaaagagaacttcctg
aactccagagtgatctttatccgctggctcgtctccttctggctggagcccagagccacc
tccggctctcacatccccggagtggagggagagaatgtcccaaagaacatccagagggca
gcggcgggtctggcggggcgggtggaggactccgggccccggccggatgctctggagggg
ggaggggtctgtggggagccggaacagtcccactccaacaccagcaccctgacggagcga
gagcccagctcctccagcctctgcagcgtcgatgaggaacatctcacggacatcgaggtg
gtccgccgggtcctctgctcctctcgcaccaacgtcaacttcatcaccgagatcttcaga
caggcgttcctgctgccgatgtgtgaggcggcggcgatgaggaaggtggtgcgggtgtat
caggagtggatctctcaggaggagaagccagtgtttatggcggagccggaggaggaggag
gaggaggagcgctgtatggggaagggggacggaccggacatacagccagagggttctgga
cgctgtaggaaccccgggtggagtaagggttcggacagtgagctgctggagtacagtgta
aatgctggatctcaggctactctgcaggttttcgtcaccaactcgtccaacgtgttcctg
cttgaaccggccaatgagctgaagactctgctggaggagcacgtggatatgtgcaaacgc
gtcctcaacatctaccgcagcctcgtcatgcaccagaccatggagcagaaaacctgggag
cagatcctgctggtgttgttgagggtgacggaatgtgtgatgaagagacctccctccatc
atgcctcacgggaagaagagtaacacactctcaggacgcctcgcaggagccatctttcag
accctgatagtggcgtggattaaagggaatctgaacgtgtatatctctcgggagctgtgg
gacgacctgctctcagtcctgtcctctctcacctggtgggaggagctagtgacggagtgg
tccctcaccatggagaccctcaccaaggttctggcccggaacctgtacagcctggacctg
aacgagctgcctctggataaactcagcgagcagaagctgaagaagcacaaaggcaaaggt
ggtgctcacgagggccagaagatggtagtggatcgttctttttccaaaggctggagccgg
gacccccccggccaggctgtggccatgcgacagcgcagcgccacgaccgccggctcgccg
gggatcgagaaagctcggagtatcgtccgccagaagaccgtcgctctgcggagctgctcg
acgggtgacagtctgttatcttcagcgtttatccgcagcgctaagagcgcgcccgtcctc
gtccaccccgcccaccccctcctgcctgactctgtcctcacccccctcgcagaccacctg
ccagatctggaggagccggtgctggccccccgcgggccccgggcgcggcacagctctcag
agcgaggagagcgcggcggcggaggttttcagcgcggcggtgtctgcggcggcggcagag
ctggagcagccgcccctcccgcgcagcagcagcgcctccgacatcatggagcccttcatc
aacgagcgggtcaaaggtgcacttcctgtttctgacagcccctctcacaccccccacccc
tcctcctcctccaacacctccaccttcaacaccaccaacaccacggcccccacagacccc
ccccagtgcccccagtgtcctcagtgccctcagaccgccgaccccccgagcagcgagagc
cgggcgtcctctctggaggttggcgacagcatctacgaccacctctgccagatgctgccg
gggccacagccgcccttcgtccccgactggacgtgcctcgccgctacgcccgccacaccc
actatacccgatacacccgctaaacacgccccactcgccgaggacgaccttctcagctcc
ctgagagagtacttcatgctcagggacactgcataccctggggaggcggggtttgggagt
ttagatgcggaggcagaggcggagtctatcgtagaaaggggcggggttttagacgataag
gagatagacgcaagcgagcagagtttctacgattgtttagagcactgtgattgggtgtcg
acttgcacgcagatcaaatctagcgaaaccaatcaaaccaatagatcagaccagaataga
tcaagcgaggagcaaacgtccaatcagaatcagagtttagcagatgataggcgggattca
gattcacggttacacaggcaggacgcgaccgatcgctcaggtgagatggaacccatctct
cagcacccgcaatccacgtttcgccccagattgaaccgaggcggttccaaaaagcgacaa
agcggcggcggaggaggaagtggtggaggaagtggtggaggaggaggaggaggaagcagc
ggcagcagcagcggcggcggcgtccacgtcagtttccgtccgtccacggagtccgtgcac
ttcctgaacccgctggaccccaaagaggcgcactggaaggtccgcctccgccgcctcagc
cacttcagtggccaatcagcaggctccaagcttcgagacgggtcaggaggaggaggggga
agcggcggggaggcggacgcggcgccgcaccgtcccgggcgcatcggccgcccctcgctt
ccccgcactcgcgcatctcgctccaggtcgcaggaatccggctgcagcccctcccgccag
caggtggcgctcctgggcggcgtgtataagtcggtggtccacgccctctccaagcccaag
agccaatcggcggccggcccgagccacggcgcccccaccaagcccccgccggacgcgccg
ctgaaggacctgtactcgcatgttatgggctattttggaagaagagcagcagctaataat
aaagatgagttgccgcagaaggtgcgtcccgtctccaccgatgtgggcagcagcaatccc
aacgtcagcgacctgatggacgagttcatccaggagcgactcagagccagaggaacctcg
ggaatgacgaggagaggcagtagtccaggcagtttggagataccgaaggattttccggat
gttctgacccgttcgaacgccacccgacccgccgacgatcccggggttccctctgagtgg
acgtcacctgccagcgccagcgggagtgacatcatcagctccgacagccaatcagattca
ttcaatgccttccaatacgacaataagtatgaaaatttcagctttgctcctgaggcgctg
gggtcagcggagcaggagggtgggacgggaaacacactggatgaaccggatcacgccagt
ctcaccactttacacatcgactccgagaccagtagcctcagccaacacggcctgtctgct
gatactgttaccattacaggttctgaaagtgcgtctccgctgcattctctgggtgggtct
cgctctcagactccgtctccggccaccctgacggccgaacacaccaaacacaaagacctg
cagctcgacgagaaactgcaccactccgtactgcagacacctgacgacctggagaccagt
gagttccccacggaggactgcagcgtgatggccggaggctctctgaccggctggcatgcg
gacgtggccacagtgatgtggagacggatgctgggaattctgggagacgtgaactccatt
aaagacccggaaattcacgcccaggtgttcgactacctgtgtgagctgtggcagaacctg
gccaagatcagagacaatctaggaatatccctcgacaaccagacgtctccgccccctccg
gatctgatcccgcctctgcggattctcaccccctggctgttcagagccaccatgctgtca
gagaggtataagcagggtaagcttcacgcctataagctcatctgcaagatcatgaagcgc
cgtcaggatgtttccccgaactcagacttcctcacacacttctacaacatcatgcactac
ggcctgctgcaccaggaccaggacattgtgaacaccatcattaagcactgctctcctcgc
ttcttctccatcgggttgccgggggcaaccatgctcatcctggactttatcgtagcggcg
agcagagtgacggcctgctcatctctaaacgctccgcgggtggaggctcagattctgctg
gggtctctggtctgtttcccgaacctgtacgaggagcttcctgccctccaccccaccacc
gccgacgtcatcatgaccaagtttaaggacgtgaaggaacacattattaaacacatcctc
gcttcagccagagacgagccctcagctccagccaggtgtgtagctctgtgtagtctgggt
atctggctctctgaggagctgatccacggcactcgacaccctcagattaaagaagctctc
aacgtcatttgcgtcactctgaagttccccaataaaacagtagctctggtggcttcagat
atcctgcatttactcataaactacgtggatcacctgcaggcgtttcctcccgacatgcca
aagaaaatcgtagagattctcatagcaaccatcacctacctgctgccgtctacagagtcc
tctcctcacgaactggacaaacggctggtggtgtctctgctgctgtgtttgctggactgg
gttatggctcttcctccaaagactctcctgcagccggtccagactctggttctggataaa
gacaaggcggataaatccgtgctgagtgccatctacaaggtgttgcacggctgtgtttac
ggggctcagagtttcagtagcgctcggtatttcccgctcagtctgtcggatctcagcagt
ccggattacgacccgttcctgccgctggaaggtctgaaggagccggagccgctgcactca
cccgactccgagagatcctccaaactacagcccgttactgaggtgaggagtcgtatccag
cagggtctgatctccatcgccgctcgcacggttatctctcacctggtgaatcacctggga
cactaccccatgagcggcggtcccgccaccctgaccagccaggtgtgcgagaaccaggac
aacccgtactgcgacagcagcgacctggcgcccgagctcttccacacgcccaacctgcag
ttcttcgtcctgaacggcaccacgctgctgtcctgcctgcagatccgggcgcaggacggc
ctgcccggcggcgggatggcggcgggactcacctccgccaacgcctgtgtacgggtcatc
gtacgggacatctccggtaaacactcgtgggactcggcggtgctgtacggacctccgcac
tgcgccgctcccagccagcccattcacttccccaccccgtcctccgggcctgcggggggc
gacggagagagcagtgctgagggggaggggctggagagagaggaggaggagaacgaggag
gagaacgaggagatcctggagagcgaggagatgcagagggagcaggaggacgaggagttg
gaggaggaggagcaggaggcggagctagacgaggaggaggaggcggttttggagctgatg
gcgccgctggcgaagcgtcggtgtcgggaggcggtacccagctgggacgccctgcaggac
ggggaggacggggaggacgcgctggacgagatgctgcagtacctcgggtactccagcccc
gagtgcctgcagcgcactggcatgcccctcaacatcccggccccgccccccgcctgcgtc
tcagagaaacaggagaacgacgtcatcaacgccatcctgaagcagagcgccgaggagcgc
gagttcagcctccaccgcggcaacgacgtccacatgcgggcggcggcacagccggagccc
cgcccccagcgcccgcagtccgccttctactactgcagactcctgctcaacatcctcggc
atgaactcctgggagaagaggagcaatttccacctgctgaagaaaaacgagaagctgctg
agggagctgaaaaacctcgactccagacagtgccgcgagacgcacaagatcgcggtgttt
tacgtggccgaggggcaggaggataaacactccatcctctccaacaccagcgggagtgag
gcctacgaggacttcgtctccggactgggctgggaggtgaatctgacgagtcactgtggg
tttatgggaggactgcagaggaataagagcaccggtttgaccacgccgtacttcgccacg
tctacggtggaggtgatgttccacgtctccacccgcatgcccccggactccgacgactcc
ctcaccaaaaagttgaggcacttggggaatgatgaggttcacatcgtttggtcggagcac
actcgggactacaggagaggaatcatccccactgagtttggagacgttctgatcgttatt
taccccatgaagaaccacatgtacagcatccagatcatcaaaaaaccagaggtcccgttt
ttcggcccgctgtttgatggagctatagtggacgggaagatcttgcccacgatggttcgc
gccaccgccatcaacgccagccgagcgctgaaatccctcatcccgctctaccagaacttc
tatgaggagagagcgcggtacctggagaccatcgtccagcatcacctggagtccagcacc
ttcgaggattacgcagcccggctgttctgcccagcaccgttccagcccatgccctccgaa
acagagagggatggagtgatgttcctcctcctccctgcccccccgttagagagggcgggg
ctgatgaaggtaaaggggaagggcctgaagcggaaggtgtttcacgctagctgtgaatgg
ctcctcccacgagagccaggccgaaaaccccagcgctcctcccgacgccagcgacttagc
ctcgcccatgtctcctcgggctag
DBGET
integrated database retrieval system
