Astyanax mexicanus (Mexican tetra): 103030034
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Entry
103030034 CDS
T05042
Symbol
lhx2b
Name
(RefSeq) LIM/homeobox protein Lhx2b isoform X1
KO
K09373
LIM homeobox protein 2/9
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103030034 (lhx2b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
103030034 (lhx2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
103030034
NCBI-ProteinID:
XP_007229184
Ensembl:
ENSAMXG00000035303
UniProt:
A0A8B9J481
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All DBs
Position
12:584855..596783
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AA seq
424 aa
AA seq
DB search
MNCTGPGLRLTEISARSTKASTCCSFSTMLFHGVPGADMRGVVEEMERRGKSDSAPISSA
IDMGETETSAPSMSGERVALCAGCGGRISDRYYLLAVDKQWHMRCLKCCECKLNLESELT
CFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCSKMLTT
GDHFGMKDSLVYCRLHFETLVQGDYGAPFGHADVAHGKGAVPAGPLGLAYYNGVGTVQKG
RPRKRKSPGPGADLAAYNAALSCNENDGDPMDRDSQYSSGQKTKRMRTSFKHHQLRTMKS
YFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKASDGSNLP
GGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLDVHECRSPSQTTL
TSLF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcaccgggccgggactgcgcctcacggaaatctcggcccgcagcacgaaagcg
agcacgtgctgctcgttctccacgatgcttttccacggcgtgcccggcgccgacatgcgc
ggggtcgtggaggagatggagcgaaggggcaagagcgactcggcgcccatcagctccgcc
atcgacatgggggaaacagagacgagtgcgccgtccatgagcggtgagcgcgtggcgttg
tgcgcgggctgcggcggcaggatctctgaccgatactacctgctggccgtggacaagcag
tggcacatgcgctgtctgaagtgctgcgagtgcaaactcaacctggagtccgagctcacc
tgtttcagcaaggacggtagcatctactgcaaagaggactattacaggaggttttcggtg
cagagatgcgcgcgctgtcacctgggcatctcggcttctgagatggtgatgcgcgcgagg
gatttggtgtaccacttgaactgtttcacgtgcacgacgtgtagcaaaatgctgaccacg
ggcgaccacttcggcatgaaggacagcctggtgtactgccgcctgcacttcgagacgctc
gtgcagggtgactacggcgcgccgttcgggcacgcggacgtggcgcatggtaaaggcgcg
gtgcccgcgggcccgctgggactggcctactacaacggggtgggcaccgtgcagaagggc
cgaccgaggaagaggaaaagtccggggccgggggctgatctagcggcttataatgcagcg
cttagctgtaatgaaaacgatggtgatcctatggacagagactctcagtacagttctggc
cagaagaccaagcgcatgagaacctccttcaagcaccatcagctccgaaccatgaagtcc
tatttcgccatcaaccacaaccctgatgccaaggacctgaaacagctggcccagaaaacg
gggctcaccaagcgagtacttcaggtttggttccagaacgccagggccaagttccggcgg
aacctcttgcgtcaggagaacacgggcgtggacaaggcttcggatgggtccaacttgccc
ggaggaaccccgtccggaccggcctcggagatctccaacgcgtccatgagcccgtcgagc
actccaaccacactgacagaccttaccaaccccaccatgcccaccgtcacttccgtactg
acctctgtgcctggtagcctggacgtccacgagtgccggagcccctcacagaccaccctc
accagcctcttctga
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