Astyanax mexicanus (Mexican tetra): 103030113
Help
Entry
103030113 CDS
T05042
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103030113 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
amex04031
]
103030113 (rab40c)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
103030113 (rab40c)
GTP-binding proteins [BR:
amex04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
103030113 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103030113
NCBI-ProteinID:
XP_007245641
Ensembl:
ENSAMXG00000002591
UniProt:
A0A8B9JKY3
W5K4Z0
LinkDB
All DBs
Position
19:complement(4374661..4400747)
Genome browser
AA seq
282 aa
AA seq
DB search
MRTTMGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSLANATGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgacaatgggtactcagggcagtccggtgaagagctacgactatctcctaaaa
ttcctgctggtgggagacagtgatgtggggaaaggagaaatcctggacagcctgcaggat
ggatccgcagagtctccatacgcctatagtagtggaatcgactacaagaccaccactatc
ctgctggatggaaggagagtaaagttagaattatgggacacttcgggacagggccgcttc
tgcaccatcttccgttcctactccagaggggcacaggggatcctgctggtctatgacatc
acaaatcgctggtcattcgacgggattgaccgctggattagagaaattgatgagcacgct
cccggagtgccgcggattctggtggggaatcgtctgcacttggcgtttaagcgtcaggtt
cccactgagcaggcgagagcgtacgctgagaagaacggcatgaccttctttgaagtgagt
ccgctctgcaacttcaacgtcatcgagtcgttcaccgagctgtcgcgcatcgttctgatg
agacacggcatggagaagttctggaggcccaaccgagtgttcagcctgcaggacctgtgc
tgccgcgcgatcgtctcctgcacgccggttcacctcatcgataagctgcccctccccgtg
gccatcaagagccacctgaagtccttctccatggccaacggcatgaacgccgtgatgatg
cacggccgctcctactcgctagccaacgccaccggcagcaaaggcaacagcctgaagcgc
tccaaatccatccggccgccacagagccctccacagaactgcaccaggaacaactgcaag
atctcctag
DBGET
integrated database retrieval system