KEGG   Astyanax mexicanus (Mexican tetra): 103030113
Entry
103030113         CDS       T05042                                 
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
  KO
K07928  Ras-related protein Rab-40
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amex04121]
    103030113 (rab40c)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:amex04031]
    103030113 (rab40c)
Ubiquitin system [BR:amex04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Target recognizing subunit
     103030113 (rab40c)
GTP-binding proteins [BR:amex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab40
    103030113 (rab40c)
SSDB
Motif
Pfam: Ras Roc SOCS_box Arf MMR_HSR1
Other DBs
NCBI-GeneID: 103030113
NCBI-ProteinID: XP_007245641
Ensembl: ENSAMXG00000002591
UniProt: A0A8B9JKY3 W5K4Z0
LinkDB
Position
19:complement(4374661..4400747)
AA seq 282 aa
MRTTMGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSLANATGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq 849 nt   +upstreamnt  +downstreamnt
atgcgaacgacaatgggtactcagggcagtccggtgaagagctacgactatctcctaaaa
ttcctgctggtgggagacagtgatgtggggaaaggagaaatcctggacagcctgcaggat
ggatccgcagagtctccatacgcctatagtagtggaatcgactacaagaccaccactatc
ctgctggatggaaggagagtaaagttagaattatgggacacttcgggacagggccgcttc
tgcaccatcttccgttcctactccagaggggcacaggggatcctgctggtctatgacatc
acaaatcgctggtcattcgacgggattgaccgctggattagagaaattgatgagcacgct
cccggagtgccgcggattctggtggggaatcgtctgcacttggcgtttaagcgtcaggtt
cccactgagcaggcgagagcgtacgctgagaagaacggcatgaccttctttgaagtgagt
ccgctctgcaacttcaacgtcatcgagtcgttcaccgagctgtcgcgcatcgttctgatg
agacacggcatggagaagttctggaggcccaaccgagtgttcagcctgcaggacctgtgc
tgccgcgcgatcgtctcctgcacgccggttcacctcatcgataagctgcccctccccgtg
gccatcaagagccacctgaagtccttctccatggccaacggcatgaacgccgtgatgatg
cacggccgctcctactcgctagccaacgccaccggcagcaaaggcaacagcctgaagcgc
tccaaatccatccggccgccacagagccctccacagaactgcaccaggaacaactgcaag
atctcctag

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