KEGG   Astyanax mexicanus (Mexican tetra): 103030117
Entry
103030117         CDS       T05042                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103030117 (kdm4b)
Enzymes [BR:amex01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     103030117 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     103030117 (kdm4b)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103030117 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD DUF4537 53-BP1_Tudor
Other DBs
NCBI-GeneID: 103030117
NCBI-ProteinID: XP_007246242
Ensembl: ENSAMXG00000021589
LinkDB
Position
16:27668212..27722522
AA seq 1127 aa
MSVENSTEETMDSTSAPDPNSSPPEVPEQVPAPDPTSEVPELNPQPNPQPPEEPAVEAPL
APAPPRDANSAYKIMTFRPTMEEFQDFAKYIAYMETQGAHRAGLAKVIPPKEWKPRQSYE
TIEDMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYKKLANSKKYCTPQHKDFDDLERK
YWKNLTFVSPIYGADISGSLYDQGIPEWNISHLNTLLDMVEQECGIVIEGVNTPYLYFGM
WKTTFAWHTEDMDLYSVNYLHFGQPKSWYAIPPEHGKRLERLAQGFFPGSSQGCDAFLRH
KMTLISPSILKKYSIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWVDYG
KMATQCSCRKDMVKISMDVFVRCLQPDRYDLWKQGKDTAPLDHLKPTELTSPELEHWRKN
RVTFREKMLRRTQQKVKQLRRLKLEELKLLADEGIELDVADYQQRVEEKEALRRQQKEEK
MAREALETLEALEREEQEAALREEDNEVKKEEGEAKEGDQEGQNGEKKKKKKKKKKLALP
EQGGFQQAFEQFTSSRVADGQNNGNTVTDPGLQSNSFQKMKMAVEVKKSRRHPFSKPPTH
TPLFIVKQEASSDEELYSGLPEGGDVGQEAKKPEEGLLWQNRSPNFLAEKQFNAAMATIE
PHCAVCMLFCPYSQPHKEPPAVAKSLCGTRTRPLVPEMCFSAGAENTEPLPSSARIGEDG
TSVLLACTSCNLQVHASCYGVKPDTKQEGWMCSRCSAVAWTAACCLCNLRGGALKMTTDD
RWVHVICAIAVAEARFVNSVEREPVDVSAIPDTRKSLKCIYCHKTTKQNCGACIQCSFEN
CSTSFHVTCAHLAGVVMKPADWPYVVSVTCHKHRQTSLKVKSGPRDLSLGQEAIGRSSDG
WFYRCTIIGLASQTYYEVNFDDGSYCDNIFPENVLSHDCLRNGPPELGEFVVVNTVDGRV
LNASFVKEHVHKFYQVEFQDESQLMLKQTEIHSLNQELPKRVMTRLATMNPQDPQAQAPD
GPQAAKRPRLPTPPPPPMTATESQKDQTPLPVRPPISTYSGLSVTHSNSTSTSAPPTPMA
TPGAPALQAPQAQTGESFSHSSSYIAYMESLLNSDFPPEDRGPEPMY
NT seq 3384 nt   +upstreamnt  +downstreamnt
atgtctgtggaaaactccacagaagagacaatggattcaacttcagctccagacccaaac
tcaagcccgccagaggtaccagaacaggtcccggctccagatccgacctcggaggtccct
gagctcaacccacagcctaacccacagccacctgaggaaccggctgtagaagctcccctg
gcccctgcacctccacgagatgcaaactccgcctacaagatcatgactttcagaccaaca
atggaggagttccaggacttcgccaagtatattgcatacatggagacccagggagctcac
cgcgctggactcgccaaggtgatcccacctaaagaatggaaacccaggcaatcgtatgag
acgattgaggatatggtaattccagcccccatcatgcaggtggtcactggccagtctggt
cttttcactcaatacaacatccagaagaagtctatgactgttggagaatacaaaaaactg
gccaacagcaaaaagtactgcactcctcagcacaaagactttgatgacctggagagaaag
tactggaagaatctgacatttgtgtctcctatctatggtgcagacatcagtggatccctc
tatgatcagggcattccagagtggaatatcagccatttgaacacactcctggacatggtg
gaacaggagtgcggcattgtcattgagggggtaaatacaccctatctgtactttggaatg
tggaagaccaccttcgcctggcacacagaggatatggacctctacagtgtcaactatctt
cactttggccagcccaagtcctggtatgccattcctcccgaacatggaaagaggctggag
aggctcgcacaagggtttttcccaggcagctctcagggctgtgatgcttttcttcgtcac
aagatgactctcatctctccctccatcctgaagaagtacagcatcccctttgatcggatc
actcaggaagcgggtgagttcatgatcacattcccgtacgggtaccatgctggtttcaac
cacggcttcaactgcgcagagtccaccaacttcgccacactgcgctgggtcgactacggc
aagatggccacacagtgctcgtgtcgtaaggacatggtgaagatctctatggacgttttt
gtccgctgcctgcagcctgaccgctatgacctgtggaagcagggcaaggacacagcgcca
ctggaccacctgaagcccactgaacttaccagccctgagctggagcactggaggaagaac
cgggtcaccttcagagagaagatgcttcgcagaactcagcagaaagtgaagcagctgcgt
aggctgaagctggaggagctgaagctgctggctgatgagggcattgagctggacgtggct
gattatcagcagcgtgtggaggagaaggaggctctgaggaggcagcagaaggaggagaag
atggccagggaggcactggagaccttggaggctctggagagagaggagcaggaggcagcc
ctacgtgaagaagacaacgaagtaaagaaagaagaaggagaggctaaagaaggagaccag
gaaggacagaacggagaaaagaagaagaagaaaaagaagaagaagaagctggcactgcct
gaacagggcggcttccagcaggcgtttgagcagtttacctcatccagggttgcagatggt
cagaataatggaaacacagtcactgatccaggcctacagtccaactccttccagaaaatg
aagatggccgtggaggtgaagaagagtcgcagacatcctttcagcaagccacccacacac
accccactcttcattgttaaacaggaggcttccagcgatgaggagctatactcagggctg
ccagaggggggcgatgtggggcaggaggccaagaaaccagaggagggtctcctgtggcag
aaccgctcacccaacttcctggcggagaagcagttcaatgctgccatggcgaccattgag
cctcactgtgccgtctgtatgctcttctgtccatactcacagcctcataaggaaccccct
gccgtggccaagtctctgtgcggaactcgaacccggccgctggttcctgagatgtgcttt
agcgccggagcagagaatacagagcctctgccctccagtgcccgcatcggagaggacggc
accagtgtcctgctggcctgcaccagctgcaacctgcaagttcacgctagttgctatggc
gtcaagccagacactaagcaggagggttggatgtgttctcggtgtagtgcagtggcctgg
acagcggcttgctgtttatgtaaccttagaggaggtgctctgaagatgacgacggacgac
aggtgggtgcacgtgatctgcgccatcgcagtggccgaggctcggtttgtcaactctgtg
gagcgagaacctgtggatgtgagcgccatcccagacaccaggaagagtctgaagtgcatc
tactgccacaagaccacaaagcagaactgcggagcgtgtatccagtgctcgtttgagaac
tgctccacctccttccacgtcacctgcgcccacctggccggagtggtaatgaagcctgct
gattggccgtatgtggtgtccgttacgtgtcacaagcacagacagacctctctgaaggtg
aagtcgggcccccgggatctctcgctggggcaggaggcgataggcaggagcagtgacggc
tggttttatcgctgcaccatcatcggactcgcttctcagacctactacgaggtgaacttt
gacgacggctcgtactgcgacaacatcttccccgagaacgtgctgagtcatgactgcttg
cgcaacggacctcctgagctgggggagttcgtggttgtgaacacggtagacggacgagtt
ctgaacgcttcattcgtcaaggagcatgtccacaaattttaccaggtggagtttcaggac
gagtctcagctgatgctaaagcagactgagattcactctctaaatcaggagctgcccaag
agagtcatgactcgtttggcgacaatgaacccccaggatcctcaggctcaagcccccgat
gggcctcaggcagctaaacgcccgcggctgcccacgccgccacctcctcctatgacagct
acagaatcacagaaagaccagactccgctccccgtccgcccaccgatctccacctattca
ggcctcagtgttactcacagcaacagcaccagcacttctgctccacccacccccatggcc
acgcctggagctcctgccctccaagcccctcaggctcagactggggagagcttctcacac
agctccagctatatcgcctacatggagtctctccttaactcggactttccccccgaagat
cgcggaccggagccgatgtattaa

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