Astyanax mexicanus (Mexican tetra): 103030193
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Entry
103030193 CDS
T05042
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103030193 (gigyf1b)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103030193 (gigyf1b)
Surveillance factors
Other surveillance factors
103030193 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
103030193
NCBI-ProteinID:
XP_007236113
Ensembl:
ENSAMXG00000019988
UniProt:
A0A8T2KWY8
LinkDB
All DBs
Position
20:10112467..10132159
Genome browser
AA seq
1004 aa
AA seq
DB search
MTAETLNFGPEWLRALSRGGSITSSPPSPAMPKSKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQEEPQQPLALVPLTEEEQRNFSMSVNSVVVLRLMGKGGGAPPAGVSRGRGS
TRGGRGRGRGEGGFYQRGVEEELGFGRGREVHRSQSWDDRGERRFEKPIRREAGRGGFED
AGTSRKDYTRSDSDNWRTLREEQEEDGGELGGSWRIAGSRRDDGGPRSAGWRDHVIGEGR
RRKFDFDFRDGDVSRRRSGSEGGEDDRDGLPEWCTDEEEGEMGTFDSTGAFMCVKKTSRD
VIPEDQELEFEALEEEEEAGQERKDSTSEKAEDAENCGVLEGDVKASSPAASVPAPTHLF
EQETPLPSVTLPLKPSLQPSEVPAPVGGSTQPSKNSSVSVASSPPTAVSEHPTPGGDAEE
EDGMKHLQQEAEKMVASLQDTSLEEECFTQALQESHSAAAHNHTHSAAHTHPHPTTHPFS
HSSSALALTHESAMKWFYKDPQGEIQGPFSPVEMCEWFQAGYFTMTLLVKRGCDEGFQPL
GDVIKMWGRVPFSPGPSPPPLLGNMDQEFLKKQLEQAATAALYQQLHSRFQHHNRESGMM
PPMNRSVSVPEAGPMWDMHTSSTQPPGSDSGLWDLTMSNSPQGPTIEQLQKLQQERREAE
LRAKREEEERKRREEKRRQQEEQKRREEEELYRRKQQCRQQQELIMKLLQQSQQQSAQGG
SSWSSSQSGPLSLGKAQGKNLGLLELEAERLHKQQQQRAQQQQRLAMSQWGDSSVGMWTG
SGLEGKVGSSSVGGMSMWDEAVKNQSNHRNMGLKTSLSSPSLSDQYMLNRRKRTEDEDRL
LKLLQGMKPQDGFTTWCEQMLHALNASANNSSSPDVATIVTFLKEVESPYEVHDFIRSYL
GDTVEAKEFAKQFLERRAKQKANHQRQQQQLSKEVAGLNMNFPLQSMFQAAHVNKSSSMY
DSQGGKMKKKPSMMLHSDPSILGYSFLGSGERMMLGELETVEDY
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacgcttaacttcggtccagaatggctccgtgcactatccagaggaggg
agcatcacatcctctcctccttctccagcaatgccaaagtccaagctggccgagtaccgc
tatggccgcgaggagatgttagcactttatatcaaagataacaaggtcccagaggatatg
caggataaggagtttgctgctatcctgcaggaagagcctcagcagcccctggccttagtg
ccactgactgaagaggagcagaggaacttctcaatgtctgttaacagtgtggttgtgctg
aggctaatgggtaaaggaggcggggctcctccggcaggtgtgtcccgaggtcgagggagc
acccgaggaggacgagggagaggaagaggtgaaggaggattctaccaaagaggtgtagaa
gaggagcttggttttggccgtggccgagaggtgcaccgtagtcaaagctgggacgacaga
ggtgagcggcgatttgaaaagcccatacgacgcgaggcaggacggggagggtttgaggac
gcagggaccagcaggaaggattacactcgttctgacagcgataactggcgaacactccgt
gaagagcaagaagaggacgggggagagctgggcggaagctggaggatagcaggctcccgt
cgcgatgatgggggccctcgctctgctgggtggagagaccacgtaattggagaaggccgg
agaagaaagtttgactttgacttccgggatggagatgtcagccggcggaggagtggaagc
gagggaggagaagacgacagagacgggctgccagagtggtgtactgatgaagaagaggga
gagatgggcacctttgactccacaggggcttttatgtgtgttaagaagacatcaagagat
gtgatcccagaggaccaagagctggagtttgaggctctagaggaggaagaagaggctgga
caagagagaaaggacagcacttctgaaaaagcagaggatgctgaaaattgtggagtgttg
gagggagatgttaaggcttcttctcctgctgcctctgttcctgctcccactcacctcttc
gagcaggagacccccttgccttctgttacactccccttaaagcccagccttcagcctagt
gaagttccagctccagtagggggcagcacccaacccagtaagaattcctcagtttctgtg
gcttcctctccccccactgctgtttcggagcatccaacaccaggaggagatgcagaggag
gaggatggcatgaagcaccttcagcaggaagcagagaagatggtcgcttctcttcaggat
acttctctggaagaggagtgtttcacacaagcacttcaagaaagccacagtgctgccgct
cacaaccacacgcattctgctgcgcacacacacccgcaccccaccacacatcctttctct
cactcctccagcgccttggcgctgactcatgagtcagcaatgaagtggttctacaaagac
cctcaaggagagatccaaggtccatttagtccagtggagatgtgtgagtggttccaggca
ggctatttcactatgaccctactggtgaaaaggggctgtgatgagggatttcagcctctg
ggagacgttattaagatgtggggacgtgtgcctttctctccaggaccttcgccccctccc
ctgctgggcaacatggaccaggagttcctgaagaagcagttagagcaggcagccacagct
gctctataccagcagcttcattcaagattccaacaccataaccgggagtctgggatgatg
cctccgatgaaccggtccgtgtcagtgccagaagcagggcccatgtgggacatgcatacc
tcatccacacagccaccaggcagcgattctggtctgtgggacttaaccatgagtaactca
cctcagggtccaactattgagcagctgcagaaactccagcaggagaggcgtgaagctgaa
ctcagggcgaagagagaagaagaggagaggaagcgtcgagaggaaaagaggaggcagcag
gaagagcagaagaggagggaggaggaggagctatacaggagaaaacagcagtgtcgtcag
cagcaggagctcattatgaagctgctccagcagagccagcagcagtctgcacagggaggc
tccagctggagttcatcccagtccggacctctttctctcggcaaagcccaggggaagaac
ttaggtctgctggagcttgaggctgagagactgcacaaacagcagcagcagagagcccaa
caacagcagaggctggcaatgagtcagtggggtgatagctctgtgggcatgtggacggga
tcaggtttggagggaaaggtcggcagttccagtgtgggtggtatgagcatgtgggacgag
gctgtgaagaaccagagcaatcaccgaaacatgggcttgaagaccagcctcagcagcccc
tccctcagtgatcagtacatgctaaatcgccggaagcgtactgaggatgaggatcggctg
ctgaagctgttgcagggaatgaagcctcaggatggctttaccacatggtgtgaacaaatg
ctacacgctctcaacgcctccgccaacaactcctcctctccggatgtggccactattgtg
acattcctgaaggaggtggagtcgccttatgaggttcatgacttcatccgctcatatctg
ggtgacaccgttgaagccaaagagttcgccaagcagttcttggagcgccgtgccaagcag
aaagctaaccaccagagacagcagcagcagttgtctaaggaggttgctgggctgaatatg
aacttcccattacagtccatgttccaggcagcacatgtgaataaaagtagcagcatgtat
gacagtcagggggggaagatgaagaagaagcccagcatgatgcttcactctgatcccagc
attctcggctattcgttcctgggctccggagaacgaatgatgctgggtgagctggagaca
gtggaggattactga
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integrated database retrieval system
