Astyanax mexicanus (Mexican tetra): 103030200
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Entry
103030200 CDS
T05042
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103030200
04020 Calcium signaling pathway
103030200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103030200
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103030200
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103030200
NCBI-ProteinID:
XP_049341726
LinkDB
All DBs
Position
12
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AA seq
2123 aa
AA seq
DB search
MILATIIANCIVLALEQHLPAEDKTPMSRRLEKTEPYFIGMFCFEAGIKIVALGFVFHKG
SYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKS
IMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGRLHSTCLPAADIRENDTVAVWKLEFPCG
FRPCPNKYFCSDQWIGPNDGITQFDNILFALLTVFQCITMEGWTTVLYNANDALGPSYNW
LYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWID
RAEEVMLAEENKNSGPSALDVLKRATTIKRRGVDAIRRGPEEQYADIASVGVPLNRASIR
SAKRGPTAYFRRKERLLRISIRRMVKTHTFYWTVLGLVALNTLCVAIVHHKQPHWLSCFL
YYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDCGVIVGSIFEVIWGFFRPGMSFGI
SVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLLFLLFLFIVVFALLGMQLFGGR
FIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLF
GNYTLLNVFLAIAVDNLANAQELTKDEEEEEEAFNQKHALQKAKEVGPMSSFMCSERRRR
PYLYRKRAIHRSRAAYSLEESDVPPLNASNSFMSRRERRRRLTLSVWEQRTSQLRRHRQM
SSREILYTSTNEERTSPSHSIRRTAEVSRPTSHSLRLPTEKDVHASLSLRRLSDLTALEP
APLDLSLGEEDVSLPLPEPPMAVNIPAPDASSSLQVPESETSLSSSQSFGNRLRLNGEKR
QRAIRKHRPPPDLDSRSWRPQQLRDAEDDQSRSSSQERRTGKEEEQTEEKKNGNGGQTSP
DGTTAEQSEPADSEPATLQITDSTVLEHKTTTRGATEAENNNAPFSLDQDKTSVMIEVTD
PQQGLELSTTANSKDQEATKSEKEDEEVPKGPPPNSMFIFKPHNPVRKACHYVVNLRYFE
MCILLVIAASSIALAAEDPVSTNSDWNKVLRYFDYVFTGVFTFEMIIKMIEQGLILHDGS
YFRDLWNILDFVVVVGALVAFALTNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFD
CVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCNDGSKDTEKECHGYYIDYDKDK
KELKKREWKRHDFHYDNVVWALLTLFTVSTGEGWPQVLQHSVDVTDEDQGPSRGNRMEMS
IFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYM
PQNRHTVQYRLWHFVVSPSFEYTVLTMIALNTIVLMMKYYSAPPMYDVVLKHLNTAFTVL
FSVECVLKILAFGFMNYFRDTWNIFDFITVLGSITEIVVELQSASFNMSFLKLFRAARLI
KLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEETHINQHN
NFKTFSSALMLLFRSATGESWQEIMLSCLGGQNCEADPSLNSEPDGGCGTDFAYFYFVSF
IFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRMWGQYDRAACGRIHYTDMYE
MLTYMSPPLGLGKKCPSKVAYKRLVLMNMPVDEEMAVHFTSTLMALIRTALEIKIARGGE
DRGQMDIELQKEISVIWPHLSQKSLDLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKL
RQQLEEQKHAPMFQRMDASSLPQEILSSAKALPFLTHSAGSALTRGGFVALSPISPQELF
MQPPSPEPEEEEYRVQYLPPSDPVPEHRDFSAMLQVPDRAASIRASSMPRLAVEPQAGSE
NKLMKRSFSTIGDQCVNGVWQEEFSLERVSPDRLERPRQRSFRGVRSNLREPDRRERGRS
KERKRLLSPDPSRCNSEDRSQTREAHSRSPSLGRTQTPHTQGDQSASPLHSDSGTPRGRR
QLPQTPSRPRPHISYSPLVCRGHLTAEDSQSRTQPVGEGEESSSRGAGRGVISHASPQRY
ISEPYLPLHEDFNSPDASCTEDTLTFEVAIATSLGRSNAISSAPQLRHTWQVPNGHIRKR
LAQASGGTSGCELLSDTDEDDRC
NT seq
6372 nt
NT seq
+upstream
nt +downstream
nt
atgattctggcgactatcatcgctaactgcatcgttctggctctggagcagcacctgcct
gcagaagacaagacccccatgtccaggagactggaaaaaacggagccctactttatcggg
atgttctgttttgaagcgggaataaagatcgtagctttgggattcgtgttccataaagga
tcgtacctgaggaacggctggaatgtgatggatttcatcgtggtgcttagcgggattctg
gccacagctggagctcatatgaacatcccagtggacctgcggacgctgagggcggtacga
gtgctgagaccgctgaaactggtgtccggaattcccagtctacaaattgtgctgaagtcc
atcatgaaggccatggtgcctctgctgcagattggcctgttgctgttcttcgccatcctc
atgttcgccatcatcggtctggagttctacagcggacgcctgcacagcacctgcctaccc
gctgcagatatacgagagaatgatacagtggcggtgtggaagttggagtttccctgtggg
ttcaggccgtgtccgaacaaatacttctgctcagatcagtggattggcccgaatgacgga
atcacgcagttcgacaacatcctgttcgctctgctgactgtattccagtgcatcaccatg
gagggctggaccaccgtgctgtataatgctaatgatgctctgggtccctcatacaactgg
ctgtacttcattccgctcatcataatcggatctttctttgtgctgaacctggttctggga
gttctctctggggagtttgcgaaggaaagggagcgggtggagaaccggagggcgtttatg
aagctgcgtcggcagcagcagatcgagcgtgagctgaacgggtacagagcctggatcgac
agggcagaggaggtgatgctggctgaggagaataagaactctggaccttctgcgctggat
gtgctgaagagagccaccaccataaagaggcgaggggtggacgccatcaggcgcggtcca
gaggagcagtacgccgacatcgcttctgtaggtgttcctctgaacagggcgagtatccgc
agtgctaaacgaggaccgacggcgtatttccggaggaaagagcgactgctgcgtatctcc
atccgccgcatggtgaaaacacacaccttctactggaccgttctgggcctggtagccctc
aacaccctctgtgtggccatagttcatcataagcagccccactggctgtcctgtttcctc
tattatgcggagttcctgtttctgggcttgtttctgacggagatgttcctgaagatgtac
ggcctcggcccacgcctctacttccactcctcctttaactgctttgactgcggggtgatt
gtgggcagtatatttgaggtgatctgggggttctttagaccgggcatgtcgtttggtatc
agtgtcctgcgtgctctccgactgctgcgcatctttaaaatcaccaagtactgggcgtca
ttgaggaacctggtggtgtctctgatgaactccatgaaatccatcatcagtctgctcttc
ctcctcttcctcttcatcgtggtgtttgccttgctggggatgcagctcttcggggggcgg
ttcatcttcgaggattacactcccaccaacttcgatacctttccagctgccatcatgact
gtgtttcagatcctgacgggagaggactggaatgaggtgatgtataacggcattcgctct
cagggcggagtcaagtctggaatgtggtcctccatttatttcatcgtgctcacgctgttt
ggaaactataccctgctgaacgtcttcttggccatcgctgtcgacaacttagccaacgcc
caggagctcaccaaggatgaagaggaggaagaggaggcctttaatcagaagcatgctctg
cagaaggcgaaggaggtgggacccatgtcctccttcatgtgttcagagaggaggaggagg
ccctacctgtacaggaagcgagcgatccaccgcagccgagccgcctactctctggaggag
tcagacgttcctcctctcaatgcctctaactctttcatgtccaggagagaaagaagacgg
cggctgaccttgtccgtgtgggagcagaggaccagccagctgcggcgccaccggcagatg
tccagcagggagatcctgtacaccagcaccaacgaggagcggacctcgccctcgcacagc
atccgccgaactgccgaggtgtccagaccgacgtcccacagcctcagactccccacagag
aaggacgtccatgcgtccctcagcctgagacgactttcagacctcactgctctggagccg
gcacccctggacctctccttgggcgaggaggacgtttcattacctcttccagagccgccc
atggcagtgaacattcccgccccagacgcttcctcaagcctgcaagtacccgagtcagaa
acctccctcagcagctctcagagcttcgggaaccgcctgaggctcaatggagagaagagg
caaagggcgatccggaaacacagaccacccccggatttggattccaggtcctggaggccg
cagcagctcagagacgcagaggatgaccagagtcgctccagcagccaagagaggaggacg
gggaaagaggaggagcaaacagaggagaagaaaaacggcaatggaggacagaccagccca
gatggcaccacggctgagcaaagtgaaccagcagattcagagccagccacactgcagatc
accgacagcacagtcctggagcacaaaacgaccaccaggggcgctactgaggccgagaac
aacaatgcccccttctctctggaccaggataaaaccagtgtgatgatagaggtgactgat
cctcagcagggtctggagctgtccaccacagctaacagtaaagaccaggaggccacaaaa
tcagagaaggaagatgaagaagtgccaaaaggtccacctccaaacagcatgttcatcttc
aaacctcacaaccctgtgcgtaaggcctgtcactacgtggttaatctgcgttattttgag
atgtgtatcctgttggtaatcgctgccagcagtatcgctttggctgctgaagatccagtg
tccacaaactctgactggaacaaagtgctccgttactttgattacgtattcaccggagtc
ttcacctttgaaatgataattaagatgattgagcagggactgatacttcatgacggctcg
tattttcgtgatctgtggaatatcctggatttcgtggtggtggtgggagcactggtggcg
ttcgctctcacgaataataaagggagagatattaaaaccattaagtctttgcgggttctg
cgagttctgaggcctctgaaaaccattaagaggctccccaagctgaaggcagtgtttgac
tgtgtcgtaacgtctctgaagaacgtcttcaacatcctgatcgtctacaagctcttcatg
ttcatcttcgcggtcatcgccgtccagctcttcaaagggaagttcttctactgcaatgac
ggatcaaaagatacggagaaagagtgccatgggtactacatagattatgataaggataag
aaagagttgaagaagcgcgagtggaagaggcacgattttcactacgataacgtggtctgg
gccctgctgaccctcttcaccgtctccactggagaaggatggccacaggtcctgcagcac
tcggtggacgtgacggatgaagaccagggtccgagtcgagggaaccggatggagatgtct
attttttacgttatttatttcgtggtgtttccgtttttctttgtaaacatttttgtagct
ctgatcatcatcacctttcaggagcagggagacaagatgatggaggagtgcagcctggag
aagaacgagagagcttgcattgactttgccatcagtgccaaacccctgacccgctacatg
ccccagaaccgccacaccgttcagtaccggctgtggcactttgtggtttcaccttcattt
gaatacaccgtgctgaccatgatagccctcaacaccatcgttctcatgatgaagtattac
tcggcgccccctatgtatgatgtagttctgaaacacctgaacacggccttcaccgtgctg
ttctctgtggagtgtgttctgaagattctggcatttggttttatgaattatttccgggac
acgtggaatatttttgacttcatcactgtgctggggagcatcactgagatcgtggtggag
ctgcagtcagcatccttcaacatgagcttcctgaagctgttccgagcggctcggctgata
aagctgctgcggcagggctacaccatccgtatcttactctggaccttcgtccagtccttc
aaggctctgccatacgtctgcctcctcatcgccatgctgttcttcatctacgccatcatc
gggatgcaggttttcggtaacataaagctgaatgaagaaactcacattaatcaacacaac
aacttcaaaaccttctccagtgccctaatgctactcttcaggagtgctacaggtgagtcg
tggcaggagatcatgttgtcgtgtttggggggtcagaattgtgaggcggacccctcgctg
aactctgagcctgacgggggctgtgggacggacttcgcttatttctacttcgtctctttc
atcttcttcagttccttcctgatgctgaatctgtttgttgctgttattatggataatttt
gagtatctgactcgcgactcctccattctgggtcctcatcacctggacgagtttgtgcga
atgtgggggcagtacgaccgagctgcctgtggccgtattcactacactgacatgtacgag
atgctgacctacatgtctccgccgcttggcctgggcaagaaatgtccctccaaagtggct
tataagaggctggttctgatgaacatgccagtggatgaagagatggcggtccacttcacc
tccacccttatggctctgatccgcacggctctggagatcaaaattgctcgaggtggtgag
gacaggggtcagatggacattgagcttcagaaggaaatcagtgttatctggcctcacctc
tcccagaaatcgctggacctgctggtgccgatccacaaagccagtgatatgaccatcggc
aaaatctatgcagccatgatgatcatggactattacaaacagagcaaagccaagaaactc
cgccagcagcttgaggagcagaaacacgcgccaatgttccagaggatggacgcttcatca
cttccgcaggaaattctctccagtgccaaagcccttccgttcctcacccacagtgcagga
tctgcactaaccagaggaggtttcgtggctttgagcccaatctcccctcaggaacttttc
atgcagcctccgagtccagaacccgaggaggaggaataccgagtgcaataccttccccca
tcagacccggtacctgagcacagggactttagtgccatgctgcaggtgcccgacagagca
gcgtctatccgagcctcctccatgccccggctggcagtagagccacaggcgggttcggaa
aataagctgatgaagcgctcgttctccaccatcggggatcagtgtgttaacggcgtgtgg
caggaggagttctctctggagcgggtcagtccggaccggctggagagaccgaggcagagg
agcttcagaggtgtcaggtctaacctaagggagccggataggagagagagagggcgatcg
aaggagaggaagcggctgttgtcccccgacccgtctcgctgtaactcagaggacaggagc
caaacccgcgaggcacactcccgctcacccagcctggggagaacacagacaccacacaca
cagggtgaccaatcagccagtcccctgcactcagactccggaacccccagggggcgccgt
cagcttccccagacgccttctcggccccgcccgcacatctcctactcgccactagtgtgt
cgtggccatctgacggcagaggacagccaatcacggacccagcccgtcggagagggggag
gagtcatcgtcccgtggagcaggcagaggggttataagccacgcctccccgcagcgctac
atctcagagccatacctgccgctacatgaggacttcaacagcccagacgccagttgcacc
gaggacactctcacctttgaggttgccatagcaacaagcctgggccgcagcaacgccata
agctccgccccccagctgcggcacacctggcaggtgcccaacgggcatatccgtaagcgt
ctggcgcaggcgtcggggggcacgtcgggctgcgagctgctgagtgacactgacgaggac
gatcggtgctga
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integrated database retrieval system
