Astyanax mexicanus (Mexican tetra): 103030260
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Entry
103030260 CDS
T05042
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03271
Virion - Rotavirus
amex04145
Phagosome
amex04510
Focal adhesion
amex04512
ECM-receptor interaction
amex04514
Cell adhesion molecules
amex04530
Tight junction
amex04810
Regulation of actin cytoskeleton
amex04820
Cytoskeleton in muscle cells
amex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
103030260
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103030260
04514 Cell adhesion molecules
103030260
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103030260
09144 Cellular community - eukaryotes
04510 Focal adhesion
103030260
04530 Tight junction
103030260
09142 Cell motility
04820 Cytoskeleton in muscle cells
103030260
04810 Regulation of actin cytoskeleton
103030260
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103030260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103030260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103030260
04515 Cell adhesion molecules [BR:
amex04515
]
103030260
04090 CD molecules [BR:
amex04090
]
103030260
Membrane trafficking [BR:
amex04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
103030260
Exosome [BR:
amex04147
]
Exosomal proteins
Proteins found in most exosomes
103030260
Cell adhesion molecules [BR:
amex04515
]
Integrins
Integrin beta subunits
103030260
CD molecules [BR:
amex04090
]
Proteins
103030260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
103030260
NCBI-ProteinID:
XP_022535037
Ensembl:
ENSAMXG00000035720
LinkDB
All DBs
Position
4:complement(26593544..26638536)
Genome browser
AA seq
802 aa
AA seq
DB search
MEMKVVLIAALLGLFSLCTAQLDGNDCTKASAQSCGECIQVGEKCGWCTLEAFLKQGESK
STRCDEIEALIKKGCPDKSIENPRGTVSINQNKPVTNRKKDVAEKLKPDQITQIQPQKLT
LDLRAGEPQKFSLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQTITSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTADGQKFNSLVSRQH
ISGNLDSPEGGFDAIMQVAVCGDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLTDNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENTKLPEGVSISYVSHCKNGVSETGDNGRKCSNISI
GDEVSFDIAVTATGCPSQGKSETIKIKPLGFNEEVTIVLNFICECACHKDGIPNSPECHF
GNGTLECGACRCNEGRIGRVCECSKDDVRTEDLDANCRMDNGTDICSNNGDCICGTCECK
KRDNPEERYEGKFCECDNFNCDRSNNKLCGGHGRCECRKCICEANYTGSACDCSMDTQSC
VASNGQICNGRGTCECGVCKCTDQKFQGPTCEICPTCPGVCTEHKSCVQCRAFGTGELKD
KCDQECQYFNLKMVDNKEDLPQPNSQAYLTHCKERDANDCWFFFTYATKNETAEVYVVKD
PECPAGPDIIPIVAGLVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQEN
PIYKSPINKFQNPSYGRKGGAL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaggtggtgttgatagcagctctgctggggctcttctctctgtgcacagct
caactagatggtaatgactgcactaaggcttcagctcagtcctgtggggagtgtattcag
gttggagagaagtgcggctggtgcacactggaagcctttctgaagcagggagagtccaag
tcaacacgctgtgatgaaatcgaagctctgattaagaaaggctgtcctgataaaagcatt
gaaaaccctcgagggactgtcagcatcaatcagaacaaaccagttacaaatcgtaagaag
gacgtagcagagaaactcaagccagaccagatcactcagatccagcctcagaaactcaca
cttgacttgagagcaggtgagcctcagaagttttctctgaagttcaagagggctgaagat
taccccattgatctgtactacctgatggacctgagcttttccatgaaggatgatttggaa
aacgtgaagaacttgggaacagacctgatgcgtgaaatgcagaccatcacctcagacttc
aggattggctttggctcctttgtggagaagacagtgatgccctacatcagcacaacacca
gccaagctgctgaacccatgcacatcagatcagaactgcaccagccccttcagctacaag
aatgtgctgagtctgactgcggacgggcaaaaattcaacagcctggtcagccggcagcac
atctccggaaacctggactctcctgagggaggctttgacgcgatcatgcaagtcgctgtc
tgtggagatcagattggctggaggaatgtcactcgtctgctggtgttctccactgatgct
ggcttccacttcgctggagacggtaaactgggagggattgtgcttcccaatgatggaaaa
tgccacctgacggacaatatgtacacaatgagccattactatgactatccctccatcgca
catctcgtgcagaagctaagtgacaacaacatccagaccatctttgctgtgactgaagag
ttccagcctgtctataaggagctcaaaaatctgattccaaagtctgctgtgggaacgctg
tctgcaaactcgagcaatgtgatcaagctcattatcgatgcctacaattctctgtcatct
gaggtgatcctggagaacaccaagctgcctgagggtgtgtccatttcatatgtgtcccac
tgcaagaacggagtgagcgaaacaggagacaatggaagaaagtgctccaacatctctatc
ggtgatgaggtatcctttgatatcgccgttactgctacaggctgcccgtctcagggtaaa
tcagagaccataaagatcaagccgctgggatttaacgaggaagtcaccattgtcctcaac
ttcatctgtgagtgtgcatgtcataaagacggcattcccaacagtccagagtgtcacttc
gggaacggaacgctggagtgcggagcatgcaggtgtaatgaggggcgtattggcagggtg
tgtgaatgtagcaaggacgacgtcagaacagaggatctggatgcaaactgcagaatggac
aacggtacagacatctgcagtaacaacggagactgtatctgtggaacgtgtgagtgcaag
aagagggataacccagaggagcggtacgaggggaagttctgcgagtgcgacaacttcaac
tgcgatcgatccaacaataaactctgtggaggtcacggccggtgtgagtgcaggaaatgc
atctgtgaggccaactacacaggcagcgcatgtgactgttccatggacacgcagtcgtgt
gtggccagtaacggacagatctgtaacggccgtggaacctgcgagtgcggagtgtgtaaa
tgcactgaccaaaagttccagggccctacctgtgagatctgccccacctgcccaggggtc
tgcactgagcacaagtcctgtgtccagtgccgtgcgtttggtactggggagcttaaagac
aagtgtgatcaagagtgccagtacttcaacttgaaaatggtggacaacaaggaggatttg
cctcagccgaacagccaggcctacctcacacactgcaaagagcgagacgccaacgactgc
tggttcttcttcacctacgccaccaagaacgagactgctgaagtctatgtggtgaaggat
ccagagtgcccagctggtcctgacataatccccattgtagcgggcttggtcgcaggcatt
gttctgattggtctggctctgcttctgatctggaagctgcttatgatcatccacgaccgc
agagagttcgcaaagttcgagaaggagaagatgaacgccaagtgggatgcgcaagagaac
cccatttacaagagccctattaataagttccagaaccccagttatggacgtaaaggcggg
gcgctctaa
DBGET
integrated database retrieval system