KEGG   Astyanax mexicanus (Mexican tetra): 103030260
Entry
103030260         CDS       T05042                                 
Name
(RefSeq) integrin beta-1 isoform X1
  KO
K05719  integrin beta 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03271  Virion - Rotavirus
amex04145  Phagosome
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
amex04514  Cell adhesion molecules
amex04530  Tight junction
amex04810  Regulation of actin cytoskeleton
amex04820  Cytoskeleton in muscle cells
amex05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    103030260
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103030260
   04514 Cell adhesion molecules
    103030260
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103030260
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103030260
   04530 Tight junction
    103030260
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103030260
   04810 Regulation of actin cytoskeleton
    103030260
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    103030260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103030260
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103030260
   04515 Cell adhesion molecules [BR:amex04515]
    103030260
   04090 CD molecules [BR:amex04090]
    103030260
Membrane trafficking [BR:amex04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    103030260
Exosome [BR:amex04147]
 Exosomal proteins
  Proteins found in most exosomes
   103030260
Cell adhesion molecules [BR:amex04515]
 Integrins
  Integrin beta subunits
   103030260
CD molecules [BR:amex04090]
 Proteins
  103030260
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 PSI_integrin EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 103030260
NCBI-ProteinID: XP_022535037
Ensembl: ENSAMXG00000035720
LinkDB
Position
4:complement(26593544..26638536)
AA seq 802 aa
MEMKVVLIAALLGLFSLCTAQLDGNDCTKASAQSCGECIQVGEKCGWCTLEAFLKQGESK
STRCDEIEALIKKGCPDKSIENPRGTVSINQNKPVTNRKKDVAEKLKPDQITQIQPQKLT
LDLRAGEPQKFSLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQTITSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTADGQKFNSLVSRQH
ISGNLDSPEGGFDAIMQVAVCGDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLTDNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENTKLPEGVSISYVSHCKNGVSETGDNGRKCSNISI
GDEVSFDIAVTATGCPSQGKSETIKIKPLGFNEEVTIVLNFICECACHKDGIPNSPECHF
GNGTLECGACRCNEGRIGRVCECSKDDVRTEDLDANCRMDNGTDICSNNGDCICGTCECK
KRDNPEERYEGKFCECDNFNCDRSNNKLCGGHGRCECRKCICEANYTGSACDCSMDTQSC
VASNGQICNGRGTCECGVCKCTDQKFQGPTCEICPTCPGVCTEHKSCVQCRAFGTGELKD
KCDQECQYFNLKMVDNKEDLPQPNSQAYLTHCKERDANDCWFFFTYATKNETAEVYVVKD
PECPAGPDIIPIVAGLVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQEN
PIYKSPINKFQNPSYGRKGGAL
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggagatgaaggtggtgttgatagcagctctgctggggctcttctctctgtgcacagct
caactagatggtaatgactgcactaaggcttcagctcagtcctgtggggagtgtattcag
gttggagagaagtgcggctggtgcacactggaagcctttctgaagcagggagagtccaag
tcaacacgctgtgatgaaatcgaagctctgattaagaaaggctgtcctgataaaagcatt
gaaaaccctcgagggactgtcagcatcaatcagaacaaaccagttacaaatcgtaagaag
gacgtagcagagaaactcaagccagaccagatcactcagatccagcctcagaaactcaca
cttgacttgagagcaggtgagcctcagaagttttctctgaagttcaagagggctgaagat
taccccattgatctgtactacctgatggacctgagcttttccatgaaggatgatttggaa
aacgtgaagaacttgggaacagacctgatgcgtgaaatgcagaccatcacctcagacttc
aggattggctttggctcctttgtggagaagacagtgatgccctacatcagcacaacacca
gccaagctgctgaacccatgcacatcagatcagaactgcaccagccccttcagctacaag
aatgtgctgagtctgactgcggacgggcaaaaattcaacagcctggtcagccggcagcac
atctccggaaacctggactctcctgagggaggctttgacgcgatcatgcaagtcgctgtc
tgtggagatcagattggctggaggaatgtcactcgtctgctggtgttctccactgatgct
ggcttccacttcgctggagacggtaaactgggagggattgtgcttcccaatgatggaaaa
tgccacctgacggacaatatgtacacaatgagccattactatgactatccctccatcgca
catctcgtgcagaagctaagtgacaacaacatccagaccatctttgctgtgactgaagag
ttccagcctgtctataaggagctcaaaaatctgattccaaagtctgctgtgggaacgctg
tctgcaaactcgagcaatgtgatcaagctcattatcgatgcctacaattctctgtcatct
gaggtgatcctggagaacaccaagctgcctgagggtgtgtccatttcatatgtgtcccac
tgcaagaacggagtgagcgaaacaggagacaatggaagaaagtgctccaacatctctatc
ggtgatgaggtatcctttgatatcgccgttactgctacaggctgcccgtctcagggtaaa
tcagagaccataaagatcaagccgctgggatttaacgaggaagtcaccattgtcctcaac
ttcatctgtgagtgtgcatgtcataaagacggcattcccaacagtccagagtgtcacttc
gggaacggaacgctggagtgcggagcatgcaggtgtaatgaggggcgtattggcagggtg
tgtgaatgtagcaaggacgacgtcagaacagaggatctggatgcaaactgcagaatggac
aacggtacagacatctgcagtaacaacggagactgtatctgtggaacgtgtgagtgcaag
aagagggataacccagaggagcggtacgaggggaagttctgcgagtgcgacaacttcaac
tgcgatcgatccaacaataaactctgtggaggtcacggccggtgtgagtgcaggaaatgc
atctgtgaggccaactacacaggcagcgcatgtgactgttccatggacacgcagtcgtgt
gtggccagtaacggacagatctgtaacggccgtggaacctgcgagtgcggagtgtgtaaa
tgcactgaccaaaagttccagggccctacctgtgagatctgccccacctgcccaggggtc
tgcactgagcacaagtcctgtgtccagtgccgtgcgtttggtactggggagcttaaagac
aagtgtgatcaagagtgccagtacttcaacttgaaaatggtggacaacaaggaggatttg
cctcagccgaacagccaggcctacctcacacactgcaaagagcgagacgccaacgactgc
tggttcttcttcacctacgccaccaagaacgagactgctgaagtctatgtggtgaaggat
ccagagtgcccagctggtcctgacataatccccattgtagcgggcttggtcgcaggcatt
gttctgattggtctggctctgcttctgatctggaagctgcttatgatcatccacgaccgc
agagagttcgcaaagttcgagaaggagaagatgaacgccaagtgggatgcgcaagagaac
cccatttacaagagccctattaataagttccagaaccccagttatggacgtaaaggcggg
gcgctctaa

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