Astyanax mexicanus (Mexican tetra): 103030381
Help
Entry
103030381 CDS
T05042
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103030381 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103030381 (taf6l)
03036 Chromosome and associated proteins [BR:
amex03036
]
103030381 (taf6l)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103030381 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
103030381 (taf6l)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103030381 (taf6l)
STAGA complex
103030381 (taf6l)
TFTC complex
103030381 (taf6l)
SAGA complex
103030381 (taf6l)
SLIK complex
103030381 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
103030381
NCBI-ProteinID:
XP_022533983
Ensembl:
ENSAMXG00000006055
LinkDB
All DBs
Position
8:31239567..31246881
Genome browser
AA seq
642 aa
AA seq
DB search
MTEAREERRFAEVPRESIKLMAESAGVELGDDVAAMLAEDVCYRLREATQNSSQFMRHAK
RRKLTVEDFNRALRWSNTETICGYGAQDALPFRPLKEGELFFVEDREVNLVELALATNIP
KGCAETMVRVHVSYLDGKGNLEPQGTVPSAVQSLSDDLLKYYQQITRAILGEDPHLMKVA
LLDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLV
SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSD
PVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVY
GAILVAVERLLKMKDVSLTGAAEGSAAALQNSAGGVIGFRESSPGLSPPPEPLSEPPLGI
ASHLQAGGAGCQWEEWTPVSLPAMYCELYSFFGDSLAVRFSTGPALGGAPSAAPIQSSDS
RKEPGNGTANLESTRKMPQLTANMNISPRQDGSPRTEPAPPSLAATASGRSLARSSSSSS
SVTRSRSSSSRPGRSASQSRDIFPKTRFTPPQAGPPAFSFLIGGRQMGRRCQGRRFQTSF
TPTPLLTSLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLYLPL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagcgagagaggagcgtcgtttcgcagaggttccccgagagtccatcaaactc
atggcggagagtgccggcgtcgagctgggggatgatgtagcagcgatgctcgccgaggac
gtgtgttaccgtctcagagaggccacacagaacagctcacagttcatgagacacgccaag
aggagaaaactcactgtggaggactttaacagagcactccgctggagcaacactgagacc
atctgtggctatggtgcacaggatgctctaccattccgcccattaaaagagggagagctt
ttctttgttgaagaccgggaggtgaacttggtagagctggctcttgccactaacattccc
aaaggctgtgctgaaactatggtgcgagtgcatgtgtcttaccttgatggaaaaggaaat
ctggaacctcaaggcacagttcccagtgcggttcagtctctgtctgatgacctgctcaag
tattaccagcagatcactagagccatattaggagaggatccacatctaatgaaagttgct
ttgctggatctgcagtccaactccaagattgctgccctgctgccttactttgtttatgtc
attagtggggtgaagtcagtaagtcatgatctggatcagttgaacaggctgctgcacatg
gtgaaaagtctggttcagaacccatatctgtacctgggctcatatgtgcggagtcttgtt
tccagtgtcatgtactgcatcttggagccgcttgctgcttccattaacccactgaatgac
cactggaccctgagagactacgctgctctgcttctcagccacatcttctggactcatggt
gacctggtgagcggactgtaccatcagatcttgctgtcgcttcagaaagttctgtcagat
ccagtccgacctctctgttctcactacggggctgtggttggtttacacgctcttggctgg
aaggctgttgagcgggtgctgtatccccatctgcctgcatactgggcgaacctgcaggcc
gtgctggatgattattctgtgtccaatgcacaggtgaaagcagatggacacaaagtctac
ggagccattcttgtggcagtggagcgcttgctaaaaatgaaggatgtgagtctgactgga
gctgcagaaggcagtgctgctgcccttcagaattctgctggtggggtaattggtttcaga
gagagttcaccgggcctcagccctcctccagaacctctgtctgaacctcctttgggcatc
gccagccacctgcaggcaggtggggcaggatgtcagtgggaggagtggacccccgtctct
ctccccgccatgtactgcgagctctactccttctttggagacagtctggctgtgcgcttc
agcactggccctgcactaggtggtgctccgtctgcagctcccattcagtcttcagattct
aggaaagagccgggcaacggcacagctaatctggagagcacacgcaagatgccccagctc
actgctaacatgaatattagcccaagacaggatgggagtccacgcactgagcctgcacca
ccaagtttggctgcaacagcatcaggaaggtctctggcccgctcctcctcctcctcatcc
tcggtcactcgctccaggtcctcctcctcccgtccaggtcgttcagccagccaatccaga
gacatcttccccaaaacacgcttcacacctcctcaagccggacccccagccttctccttt
ttaatcggtgggcgtcagatgggccggcgatgccaaggacgacgttttcagacgagtttc
accccgacaccattactcacttcccttccacctcgggcttatgcccacaaactacctgtc
atagggagagtgagcaaaccagtgagacggtggacgtgctcccactactcactgtacctt
cctctttaa
DBGET
integrated database retrieval system
