Astyanax mexicanus (Mexican tetra): 103030414
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Entry
103030414 CDS
T05042
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103030414 (gapvd1)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103030414 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
103030414
NCBI-ProteinID:
XP_007239493
Ensembl:
ENSAMXG00000001364
LinkDB
All DBs
Position
12:16243365..16299154
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AA seq
1482 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNGEVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFVDGYKTLGFQESVYGEFLGRLRENPRLVASCLVAGERH
NQENTQGVIHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKLTERFTPAQQERLFGEKGS
DGYRRKVQAAVESNEAKLVALVNSFIGYLKQNTYCFPQSLRWIVSQMYKTLARVERLDVG
EVKTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADADDGD
PRRKSSLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLTRTVVYITHNQLLALLDF
VRSVTAGDQLREEELLALETLLSSVPQSHTVKSNSLELTPSNTPQLSPATTPANKKNRLP
IGQQLAAITCWDSSATALSAHIPLVAPFASRSRSRSNIAQDSEPDASSQDSQQEVLPEEV
LVISLGTSPQTVPGMMSENEVLNLQLSDGGQGDAPADETKLHGKPDKTLRFSLCSDNLEG
ISEGPSNRSNSVSSLDLEGESVSELGPGPSSSNGVEALQLLEHEQATTQDNLDDKLRKFE
IRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGATVENMLGSLLCLPGP
GSVLLDPYGSTISETTSEAWSVEVLPSDSETADLKQEERLQELESCSGVGSTSDDTEVRE
VSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESTQGAQADS
LLAMFDPLSSGEGSCTGTIVRPKVHYARPPHPPPDPPIPEASAVGPSEPRPSLFAPHCLV
QSELEHGKQRHSYPERLVRSRSTDVVSAGRRPNSDPGLNRRTMLEERDQANVYSAGPTAS
PSKDSLRMEPEDRKDSDDEKSDRNRPWWKKRFVPAIPKVLYWTAESEIPAPIAAFRKRDK
QEKDEQGTERMPQAISDEPSLHRQSCHAQAAEDILDKYRNIKRTSPSEGAAAAAYDGPEV
CREGESEHDSPRDEGLQNISTDDLPDSASQTAQPQDKFSFSDAKKKLRMALCSADSIVFP
ILSLATTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETMRCVSRLDPRTC
RKLLTAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRL
LLEHMESKMQDFIIAFQGCTAADDKTAAVEDFLRYLYGAMAHDAIWQYASEEQLQDAQMA
IERSVMNRIFKLAFYPNQDGDILRDQVLQEHINRLSKVVSANHRALQIPEVYLKEAPWPS
AQAEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDAVPGADDFVPVLVFVLIRANPP
CLLSTIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaagaaagactgtatgtg
gcttcagagaagcaacttatccagaggctgaatggggaggtgctgaagacagcagaaagg
ctctaccgtgcagcctggatagccaagcagcagaggattaaccttgatcgtctcatcctt
accagtgcagaggcctcccctgctgaatgctgtcagcatgccaaggttttggaggacaca
cagtttgtggatggctataagacactgggctttcaggaaagcgtttatggagaattcctt
gggaggctaagggagaatccacggttagtggcctcctgtctcgtcgctggagagaggcat
aaccaagaaaatacacaaggagttatccacactgttttcacctcactctatggcaactgt
atcatgcaagaggatgagagttacctgctgcaggtcctacgttacttagttgagtttgag
ctgaaggagagcgacaacccacggcgactactgcggcgtggtacgtgtgcattcagcatt
cttttcaagctcttctccgagggcctgtattctgccaaactcttcctcactgctactttg
cacgagcccataatgcagctactggtggaggatgaagatcacttggagactgatccagca
aagctgaccgaacgatttacccccgcccaacaagagcgcctgtttggggagaaagggtct
gatggttaccgtcgtaaagtgcaggcagctgtggaatccaatgaagctaagctagtggcc
ctggtcaactccttcattggctacctgaagcagaatacctactgcttcccccagagtttg
cgctggattgtgtctcagatgtacaagactctggcgcgggtggagagactggatgtgggg
gaggtgaaaactatgtgcacagacctgctgctcacatgcttcatatgcccggccattgtg
aaccctgaacagtatggaattatctcagatgctccgatcaatgaggtggcacgcttcaat
ctcatgcaggtggggcagttattacaacagttagccatggctgatgcagatgatggagat
cctcgacgcaaaagcagtttatcaaagtttgataaaagttgtgttgctgcctttttagat
gttgtaatcggtggaagagctgtggagacccctcccatgtcatcaatgaatcttttagaa
ggcctcactcgaactgtggtctacatcacacataatcagctcctggctttgttggacttt
gtccggagtgtgactgcaggtgaccagcttagagaggaagaactcctagctttggagacc
ctgctatccagtgttccacagtcccatacagtcaagagcaacagcttggagctgacacct
tccaacacacctcagctttccccagctactacacctgctaacaagaagaacaggctgccc
ataggacaacagttagctgccataacgtgttgggattcctctgctacagccctgtctgct
catattcctttagtagccccgtttgcctcacgcagccggtcccgctccaacatcgcccag
gacagcgagcctgacgctagctcccaagactcccagcaggaggtcctgcctgaggaggtt
ctggtcatctcactgggaacgtcccctcagactgtgcccggaatgatgtcagagaatgag
gtcctgaacttgcagctgtccgatggaggtcaaggagacgcaccagcagatgagacgaag
ctgcacgggaaacctgacaaaaccctgcgcttttcactctgcagcgacaatctggagggc
atctctgaaggaccttcaaaccgctccaactctgtctcctcactggacctggaaggggaa
tcggtctcagaattgggcccagggccatcaagcagcaatggtgttgaagctctacagctg
ctagagcatgaacaagccactacgcaggataatctggatgataaactccgcaagtttgag
attcgggacatgatggggctgacggatgatcgggatatttcagagacagtcagtgaaacc
tggagcactgatgtccttggcagcgactttgaccctaatatggatgaagacagacttcaa
gaaatagccggagccacagtggagaacatgctggggagtctgctgtgtttgccaggacct
ggctctgttcttctggatccttacggttctacaatttctgagacaacgagtgaggcttgg
agtgtggaggtcctacccagtgactcagaaactgcagatttgaagcaggaggaacggctg
caggagttggagagctgctcaggagtgggcagcacttcagacgacacggaagtgagagag
gtcagctcccgacccagcacgcccgggctgagtgttgtctcaggaattagtgcaacatct
gaagacattcctaacaagattgaagaccttcgttcagaatgcagctcagactttggaggc
aaagactctgtaaccagcccagacggagaggaatctacacaaggagcccaagctgactct
ctgctggccatgtttgaccctctctcttcaggagaaggctcatgtacaggcactatagtt
cgtcctaaggtgcactacgccaggcctccacatcctcccccagatcctcccatcccagag
gccagtgctgtggggccgtctgagccccgtccctcactctttgcccctcactgtctggtc
cagtctgagctggagcacgggaagcagaggcactcgtaccccgagcgcctggtccggagc
cgcagcacagatgtagtgtctgcaggacgcagacccaacagtgacccgggccttaaccgc
agaaccatgttagaggagagggaccaggccaatgtttattcagcaggacccacagcctcg
cccagcaaagactccctgcgcatggagcctgaagataggaaagacagtgacgatgagaag
tcggacagaaacagaccctggtggaagaagcgttttgttcctgccattcctaaagtgctc
tattggactgcagagagtgagatcccagcaccgattgcagcattccgaaagcgggacaag
caggagaaggatgagcaaggcacagagaggatgcctcaagctatatcagatgagccatca
ttgcataggcagagctgtcatgctcaggcagcagaggacatattggataaatacagaaat
atcaagagaaccagccctagtgagggagcagcagctgcagcatatgatggaccagaggta
tgtagagagggagagagtgaacatgattcaccgagagacgagggcctgcagaacatctct
acagacgacctgccagactcggccagtcagacggcgcaacctcaggacaagttctccttc
agtgatgctaagaagaaattacggatggctctgtgctctgcagattctatagtctttcct
attttgtctcttgcaactacacggaatggccttcctgaccatacagaccctgaagacaat
gagattgtatgctttctgaaggtgcagctggcagaggctattaacctgcaggataaaaac
cagatggctcagatccaggagaccatgcgctgcgtcagccgcctcgacccccgcacttgt
aggaaactgctcactgccattgcagaggactacaggaagcgagcaccatacatagcatat
ctgacacggtgtcgccagggtctgcagacatctcaggctcatctggagaggctgctgcag
agggtactgagagataaagaagtggccaaccgctacttcactactgtctgtgtccgatta
cttctggaacacatggagtccaaaatgcaggacttcatcatagcgtttcagggctgtact
gcagctgatgataaaactgcagcagtggaggatttcctccgttacctgtatggggccatg
gcacatgatgccatctggcagtatgcaagtgaggagcagctccaggatgcccagatggcc
attgaacgtagcgtcatgaatcgcatcttcaaactggccttctaccccaatcaggatgga
gacattctaagagaccaggtcttgcaagaacacattaatcgactgtccaaagtagtgagt
gccaaccacagggctcttcaaatcccagaggtctatctgaaagaggctccatggccctca
gcacaggcagagatcaggacaatcagtgcatataaaactcctagggataaagtacagtgc
atcttgcgtatgtgctccactatcatgaacctgcttagcctggccaatgaggatgccgtg
cctggagccgacgactttgtgcctgtgctcgtatttgtcctcatcagggcaaatcctccc
tgccttctgtccaccattcagtacatcaataatttctatgccagccggctgagcggggag
gagtgctattggtggatgcagttcacggccgctgtggaattcattaaaaccattgatgat
cgcaagtga
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integrated database retrieval system
