Astyanax mexicanus (Mexican tetra): 103030421
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Entry
103030421 CDS
T05042
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103030421 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amex01007
]
103030421 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103030421 (farsa)
Enzymes [BR:
amex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
103030421 (farsa)
Amino acid related enzymes [BR:
amex01007
]
Aminoacyl-tRNA synthetase
Class II (U)
103030421 (farsa)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103030421 (farsa)
Prokaryotic type
103030421 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
MarR_2
HTH_11
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
103030421
NCBI-ProteinID:
XP_022520711
Ensembl:
ENSAMXG00000037912
LinkDB
All DBs
Position
19:38290021..38312009
Genome browser
AA seq
497 aa
AA seq
DB search
MADSGLLESLLRLVEKVDGGLDSQDAVGELGVEHQAVVGAVKSLQALGEVIEATQRSSKH
WELTGEGREISEQGSHEARVFNAIPEEGLPQSQLMKLPSGKVGFSKAMSNKWIRLDKAHE
GGPRVFRTVESIEDTVREKLQLVKNGKSSQLEEKEKNELKKRKLLSEVTIKSYWITKGRN
FSTTITKQETELTPEMIASGSWRDKKFKPYNFEAMGVAPDSGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFMSDPALAREFPQDYLERVKKVH
SEGGYGSQGYKYDWKIEEAQKNLLRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGLVIDYGLTLGDLMGVLHQFFMKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPVCRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcgggctgctggagtcgctgctgcggctggtggagaaggtggacggcggg
ttagacagccaggacgcggtgggagagcttggcgtggagcaccaggcggtggtcggggcg
gtgaagagcctgcaggcgctgggggaggtgattgaggcgacgcagcgttcctccaaacac
tgggagctgaccggagaggggagagagatatctgagcaggggagccacgaggcccgtgtg
tttaatgccattcctgaagagggtctgccccagagccagctcatgaaactgcccagtggt
aaagtgggcttcagcaaggccatgtccaacaaatggatccgcctggataaagctcacgaa
ggaggccctcgtgttttcagaacggtggagagtattgaagacacggtgagggagaagctg
cagctggtgaagaatggcaagtcctctcagctggaggagaaggagaagaatgagctgaag
aaacgcaaactgctctcagaagtaacaatcaagtcctactggatcaccaaaggcagaaac
ttcagcaccaccatcaccaaacaggagacagaactcaccccagagatgatagccagtggg
agctggagggacaagaagtttaagccctataacttcgaggcgatgggtgtggctccagac
tcgggtcacctgcaccctctgatgaaagtgcggacgcagttcagacagatctttctggag
atggggttcaccgaaatgcccaccaataacttcattgagagctccttctggaacttcgac
tctctgttccaaccccagcagcatccggccagagaccagcacgataccttcttcatgtct
gatccagcactggctcgtgagtttcctcaggactacctggaaagggtgaagaaggtccac
tctgaaggaggatatgggtcacaggggtacaagtatgactggaagattgaagaagctcag
aagaacctcctccggacacacaccaccgccgtgagcgctcgcatgctctacaaactagca
cagcaggagaagttcacaccagtcaagtacttctctatagacagagtttttcgcaacgag
accctggatgccactcacctggctgagttccatcagatcgagggcttggtgatcgactac
ggtcttactctaggagacctcatgggggtcctgcaccagttcttcatgaaactgggaatc
actaagttgcgtttcaagcccgcctacaacccctacactgaacctagcatggaagtcttc
agttatcatgaaggactaaagaaatgggtggaagtcggtaactctggggtcttcaggcct
gagatgctcctgcctatgggtttgcctgaggacgtgtctgtcattgcctgggggctgtcc
ttagagcggcccaccatgatcaaatacggcatcaacaacatccgtgagctggtggggcac
aaagtgaacctgcagatggtgtatgacagtccggtgtgccgcctggactcttaa
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