Astyanax mexicanus (Mexican tetra): 103030475
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Entry
103030475 CDS
T05042
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103030475 (tial1)
03041 Spliceosome [BR:
amex03041
]
103030475 (tial1)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103030475 (tial1)
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103030475 (tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_10
RRM_Nup35
Nup35_RRM_2
RRM_3
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
103030475
NCBI-ProteinID:
XP_007252311
Ensembl:
ENSAMXG00000038511
UniProt:
A0A8B9GYL6
A0A3B1II24
LinkDB
All DBs
Position
7:37729034..37737396
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AA seq
382 aa
AA seq
DB search
MEDDCHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA
AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFG
KISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK
SVQDSKQIAHLGSSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLIRQTFSPFGQIMEI
RVFPEKGYSFIRFSSHESAAHAIVSVNGTTIESHIVKCYWGKESPDMAKSVQPVTEQVDY
GQWGHWNQVYGNPQQYGQYMTTNGWQLPSYGMYGQTWNQQGFGVEQSQSPAWMGGFGTQP
SQAQPGPVMNQANFGMAGYQTQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgactgccacccaaaaaccctttacgtggggaacctctctagggatgtcaca
gagaacttgatactccagttgttcacccagattggcccctgtaaaagttgtaaaatgata
acagagcacacaagcaatgacccatattgctttgtggagttctttgaacacagggatgcc
gcagctgccctagccgcaatgaacggaagaaagattcttggaaaggaagtcaaagtaaat
tgggcaacaactccaagcagtcagaagaaagacacatccaatcatttccatgtttttgtt
ggagatttgagtcctgagatcaccactgacgatatcagagctgcatttgccccctttggg
aaaatttcggatgctcgtgtggtgaaggatatgacaacagggaaatcaaaggggtatgga
tttgtgtccttctataacaaactggatgcggagaatgcgatagtgcacatgggcggtcag
tggttgggtggacggcaaatccggaccaactgggccactcggaagcccccagcccctaaa
agcgtgcaagacagtaagcagatcgcgcatctaggcagttcaaaacagctgagatttgaa
gatgttgtgaaccagtcaagtccccagaattgcactgtatattgtggtggcatccagtca
ggtctctcggagcaccttatacgacagacattttctccttttggccaaataatggaaatt
agagttttcccagagaaaggctactcttttatcaggttttcctcccatgaaagtgctgcc
catgccattgtatcagtaaatggaactaccatcgaaagccatattgttaagtgctactgg
ggcaaagagtcacctgacatggccaaaagtgtccaacctgtaactgaacaagtggattat
gggcagtggggccattggaatcaggtgtatggaaatcctcagcagtatgggcagtacatg
acgacaaatggatggcaattaccatcctatggaatgtatggacagacatggaatcagcaa
ggatttggagtggaacagtcgcagtctcctgcctggatgggaggatttgggactcagccc
tctcaggcacaacctggtccagtgatgaaccaggctaacttcggcatggctggataccag
acgcagtga
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