Astyanax mexicanus (Mexican tetra): 103030565
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Entry
103030565 CDS
T05042
Symbol
tia1l
Name
(RefSeq) cytotoxic granule-associated RNA binding protein 1, like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103030565 (tia1l)
03041 Spliceosome [BR:
amex03041
]
103030565 (tia1l)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103030565 (tia1l)
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103030565 (tia1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
XOO_2897-deam
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
103030565
NCBI-ProteinID:
XP_007228841
Ensembl:
ENSAMXG00000037884
LinkDB
All DBs
Position
22:36418490..36432378
Genome browser
AA seq
344 aa
AA seq
DB search
MMDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGNDPYCFVEFYEHMHA
AAALGAMNGRKILGKDMKVNWASMPSSQKKDTSNHFHVFVGDLSPEISTDDVKAAFAPFG
KISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPK
SNYETGNTKHLSYEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDK
GYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRAMQQMPMPQVQANSNPGY
AAQPYGQWGQSYGNGQQMGQYVPNGWQMPTYGVYGQAWNQQGYK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaccagcccaagaccctgtacgtggggaacctctcccgggacgtgacg
gaggctcttatcttgcaagttttcacccagattggcccgtgcaagagctgcaaaatgatc
atcgatacggcaggaaatgacccgtactgcttcgtggagttctacgagcatatgcacgct
gccgctgcgctcggtgccatgaacgggaggaagatcttaggaaaggacatgaaagtcaac
tgggcttcgatgccaagcagccagaagaaagacacaagcaatcacttccatgtcttcgtt
ggtgacctgagtccagaaatctccacagatgacgtcaaagctgcctttgctccctttggg
aaaatttccgatgctcgtgtggtgaaagatctggctaccgggaagtccaaaggatatgga
tttatctccttcattaacaaatgggatgcagagaatgctattcagcagatgaatggccag
tggcttggaggacggcagatcagaaccaactgggccaccaggaaaccacctgcacccaaa
tccaactatgagacaggcaacaccaagcatctctcctacgaggaggttctgagccagtcc
agccccagtaactgcacagtgtactgtggaggcgtcacctctggtctcacagatcagctg
atgagacagaccttctctccattcggccagatcatggagatcagggttttcccagataaa
ggatactcctttgtgaggttcgactcccacgagggtgcggctcatgccatcgtgtctgtg
aatgggacgtgcatcgagggccacacagtgaagtgctactgggggaaggaaaccgcggat
atgagggccatgcagcagatgcccatgccccaggtacaagcaaatagtaacccaggctat
gccgcccagccgtacggccaatggggccaatcttacggcaacgggcagcagatgggccag
tatgtgcccaatggctggcaaatgcccacttatggagtctacggccaggcctggaaccag
cagggctacaagtaa
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