Astyanax mexicanus (Mexican tetra): 103030598
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Entry
103030598 CDS
T05042
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03272
Virion - Hepatitis viruses
amex04382
Cornified envelope formation
amex04514
Cell adhesion molecule (CAM) interaction
amex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
103030598
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
103030598
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103030598
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103030598
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103030598
04147 Exosome [BR:
amex04147
]
103030598
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103030598
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
103030598
Exosomal proteins of colorectal cancer cells
103030598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF4131
Clc-like
PFF1_TM
TMEM_230_134
Zip
FAM176
DUF202
Motif
Other DBs
NCBI-GeneID:
103030598
NCBI-ProteinID:
XP_007255493
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All DBs
Position
1:complement(83441436..83460897)
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AA seq
303 aa
AA seq
DB search
MPSSTMQMLAFILALLGVLGATVATLLPNWKVSADVGSNIMTAISQMQGLWMDCTWYSTG
VFSCTLKYSVLALPAYLQTARTTMVLSCMLATFGLCLAALGLKCTHWGGSHRSKGHTAIA
AGACFVIAGVLCLVPASWFTNEVITTFLDSKVPKSSKYEPGGAVYVAFVSAGFFLAGGVI
FCLSCPRRRNGPLDSVSSHPDKLLHQQHEQIANDRDKQKQRREQQSQTEPQEQQHKEKTA
HQDKLQVDGLQPDQPKPEKPQPEQEQQQQYYSPSRNSPRNSPRNSPRNRAQDVKAVYSLQ
DYV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtccaccatgcagatgctcgccttcatcctggcgttgctgggggtcctgggt
gccaccgtggccactctgctccccaactggaaggtgagcgcagacgtgggctccaacatt
atgacggcgatctcgcagatgcaagggctttggatggactgcacgtggtacagtactgga
gtgttcagctgtacgctcaagtactctgtgctagccttgcctgcttatctccagaccgca
cgcaccacgatggtcctctcttgcatgctggccacttttggactctgtctggctgccttg
gggctaaaatgtacccactggggtggcagccaccgctccaaaggacacacagccatagct
gcaggggcttgcttcgtcattgctggagtcttgtgccttgttcctgcatcctggttcacc
aacgaggtcatcaccaccttcttggactctaaggttcctaagagcagcaaatacgagcca
gggggagctgtttatgttgcatttgtttcagcagggttcttcttagccggaggtgtgatc
ttctgcttgtcgtgcccacgaagaagaaacggtccattggattctgtctcgtcccacccc
gacaagctattacaccagcagcatgagcagatagccaacgaccgggacaaacaaaagcag
cggcgagaacagcaaagccagacagagccacaggagcaacaacacaaagagaaaactgca
caccaggacaagctccaggtggacggactgcagccggaccagcccaagccagagaagcct
caaccggagcaggagcagcagcagcagtactactcgccgtccagaaacagtccaagaaac
agtccaagaaacagtccaagaaacagagcccaagacgtcaaggccgtctacagcttgcag
gactatgtgtga
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