Astyanax mexicanus (Mexican tetra): 103030649
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Entry
103030649 CDS
T05042
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103030649 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103030649 (dis3)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
103030649 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
103030649
NCBI-ProteinID:
XP_022530330
Ensembl:
ENSAMXG00000000563
LinkDB
All DBs
Position
21:complement(31793506..31815732)
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AA seq
951 aa
AA seq
DB search
MLKSKTFVKKTRSGGVLKIVREHYLRDDIWCGSEVCVECGDGAPVLLRDPRIESDLCTYP
HYLLPDTNVVLHQIDILEDPLIRNVIILQTVLQEVRHRSAPVYKRIKDAIHDKEKHFYTF
TNEHHRETFIEREQGESANDRNDRAIRVAAKWYTDHLSKAPNVGELKVVLLTNDRANKEK
AEQSGLLAYRCEEYIKSLIGNPELVDRLALASDDQNDITGSKLLFPEHLPLSRIQAGIKS
GTFLQGTFRASRDNYLEATVFIHGDGEDSTEVLLQGLQNLNRAVHQDLVAIELFPKERWV
APSSVVLQDDRPNDEDAEEEDAEKKLESTVSDTSVLKPTGRVVGIIKRNWRPFCGMLNQS
QIKEATRHLFTPADRRIPRIRIETRQASTLVGQRIIVAIDGWPRNSRYPNGHFVRNLGGA
GDKDTETEVLLLEHDVPHQPFSQAVLSFLPKMPWGITEEDLKVRTDLRHLCVCSVDPPGC
TDIDDALHCRDLENGNLEVGVHIADVSHFIRPGNALDQEAANRGTTVYLCGKRIDMVPEL
LSSNLCSLRSNVERLAFSCIWEMNHNAEILNTRFCKSIINSKASLTYAEAQMRIDDAGMN
DDITTSLRGLNKLAKILKAQRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMV
EEFMLLANISVAQKIYDEFSECALLRKHPSPPPSNYDILIKAAKSRDLDIHTDSAKALAD
SLNEATLEDFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRYS
DIIVHRLLAVAISADSTYPDLMDKHKQASLCNNLNYRHKMAQYAQRASVAFHTQLFFKNR
GILNEEGFILFVRKNAIIILIPKFGLEGTVFFENKDKPGPRLNFDTEGPTLTVEDQHTFH
IFDKVKVTISLDASNIQHQKIRMALVEPVIPGVSVALPEPGPEAKKPKLDR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtctaagacgtttgtgaagaagacgcgctcgggcggggtgctgaagatcgtg
cgcgagcattatctgcgggatgatatctggtgcgggagtgaggtgtgcgtggagtgcggg
gacggagctcctgtgctgctgcgggacccccggatagagagcgacctgtgtacttaccca
cactacctcctcccagatactaatgtagtactgcaccagatcgatatacttgaagatcct
ttgatcaggaacgtgatcatccttcagacggttctacaggaagtccgacacagaagcgcg
ccggtgtacaagcgcatcaaagatgccattcatgacaaagagaagcatttctacaccttc
accaacgaacatcacagagagacgtttatcgagcgggagcagggagagagcgccaacgac
cgcaacgatcgggccatccgtgtggcggctaaatggtacacagatcacctgagtaaagcc
ccgaatgtaggagagctgaaggtggtgctgctgaccaacgaccgagccaacaaggagaaa
gctgagcagagcggcctgctggcctacagatgtgaggagtacattaagagcctgattggt
aatcctgaactggtggacaggctggcgctggcgtctgatgatcagaatgatataacgggc
agtaagctgctgttcccggaacacctgccactgtccaggatccaggcgggcattaagagc
ggcaccttcctgcagggcaccttccgcgccagccgagacaactacctggaggccacggtc
ttcatccacggggacggagaggacagcactgaggttctactgcaggggctccagaacctg
aatcgggccgtgcaccaggacctggtcgccattgagcttttccctaaagagcgctgggtc
gccccctcctcagtggtgctgcaggacgatcggcccaatgatgaagatgcagaagaagag
gatgccgagaagaagttggagagcacagtgtcggacaccagtgttctgaaacccacgggc
agggtggtggggattatcaagaggaactggcgaccattctgcgggatgctcaaccaatca
cagatcaaagaggccaccaggcacctcttcactccagcagacagacgcatcccccggatt
cgaatcgagactcgacaggcctccacgctggtgggtcagaggatcatcgtggcgatcgat
ggatggccgagaaattccagatatcccaatggtcactttgtgaggaacctgggtggagct
ggagataaagacacagaaacagaggttcttcttctagagcatgatgttccacaccagcct
ttctcccaggctgtgctcagcttcctacccaaaatgccctggggcattactgaggaggat
ttgaaggtgaggacggatctgagacacttgtgcgtgtgcagcgtggatcctcctggctgt
acggatatcgatgacgccttgcactgccgtgacctggagaatggaaatctggaggtcggt
gtccacatagcagacgtcagccattttattcgtccaggaaacgcgctggaccaggaggcg
gccaacagaggcaccacagtctacctgtgtggaaagaggattgacatggttccagagctc
ctgagctccaatctgtgttctctgcgctccaatgtggagaggttggcgttctcctgtatc
tgggagatgaaccacaatgctgaaatcctcaatacgcgtttctgcaaaagcatcatcaat
tccaaggcttctctgacgtacgccgaagctcagatgagaatcgatgatgccggcatgaac
gatgacatcaccacgagcctgcgggggctgaacaagctagccaagatcctaaaggcacag
cgaatcgaaaaaggggctctgactctgtcctctccggaggttcgattccacatggacagc
gagactcacgaccccatagatcttcagaccaaagagctgaaagaaacgaactcaatggtg
gaagagttcatgttgctggcgaacatctcagtggcacagaagatctacgacgagttctct
gaatgcgccctgctcagaaaacacccctcacccccaccatccaactacgatatccttatc
aaagctgctaaatccagggatttggatattcacacagattcggcgaaagctctggcggac
tctctgaatgaagccactctggaggactttccttacttcaacacgctgctgcgcatcctg
gccacccgctgcatgatgcaggccgtctacttctgctcggggatggacagcgacttccac
cactacggcctggcctcgcccatctacacacacttcacctcgcccatcaggaggtactct
gatatcattgttcatcggctgctggctgtggccatcagcgcagacagcacctacccggac
ctgatggacaaacacaagcaggcctctctgtgcaacaacctcaactacagacacaagatg
gcccagtacgcccagagagcctcggtggccttccacacacagcttttcttcaagaacaga
ggaatcctaaatgaagaaggcttcattctcttcgtgaggaagaacgccatcatcatcctc
atccccaagtttggcctggagggaacggtgttcttcgagaacaaagacaaacctggacca
cgactcaacttcgacactgagggaccaacactgaccgtggaggatcagcacaccttccac
atatttgacaaagtgaaagtgaccatcagtctggacgcctccaatatccagcaccagaag
atcaggatggccctggtggagccagtgatccctggtgtcagtgtggcgttaccagaacca
ggaccagaagcaaagaaacccaaactggatcgctga
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