Astyanax mexicanus (Mexican tetra): 103030676
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Entry
103030676 CDS
T05042
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103030676 (sned1)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
103030676 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
Ig_DSCAM-DSCAML_C
cEGF
Motif
Other DBs
NCBI-GeneID:
103030676
NCBI-ProteinID:
XP_022531192
Ensembl:
ENSAMXG00000004584
LinkDB
All DBs
Position
5:complement(48575035..48649625)
Genome browser
AA seq
1393 aa
AA seq
DB search
MGCLLLPCLCSLLFCLRLPGGVEPAVPLHDFYPFGEEHGDTVTIKQDDGGSGLVDISVAF
PFFGDWHNGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRQAGKVFYRE
SKDPAILKRSTEDIHLYFPEFPLFSATWVLVATWHQVTYFGGSSITPVNTFQVVLITDSK
LSFTIFHYHNITWTTGMHASSGGDIAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDVVEVE
TTTNVGYPGRWVFRIDDAQVQVGSCNDSASVCPNLRPCLNGGRCIDDCITGNPSFTCSCL
AGFTGRRCQIEVDECSSYPCQNGGTCVDRINSFICQCPPGFTGSLCETDIDECQESPCLN
GARCIEGVGSFTCECQAGYTGPVCETDINECESMPCLNGGVCEDRVNNYTCTCLANFTGR
HCETQIETVELVVVTNSSSTDGVNQTASCEGQDCESRRSCKNVGPGSFECTCNPGYYGEN
CEEECLCQNGGVCVDVNGTCECPSGFTGLYCQFEVTQTPCSNNRPCPDGGPCLEYGGTYL
CTCQTGIDFDHKDAYPYVQPRSACDSSPCQNGGYCYERDGGYVCECKHGYRGKHCEIVRL
SMCASSPCRNGGSCKEEAGSYHCACPYRFTGKHCETGKPDPCAAGPCMNGGTCFHYIGKY
KCECSGSYMGRHCEISRGANSASDGRDCGPPPKVKHAEVQFSSTSPGSIALYACHPGYTP
VPRATQSICSSQGSWSQPPVCEEINECLSQPCMNGGTCRDRVASFLCECESGFTGLRCQT
DLDECLSEPCKHGGTCEDQPGSYFCHCQQGYTGQDCETEQDGCESNPCLNGGACRGYRRS
HLCVCKDGYSGDRCQTLENPCVLQPCGTRGFCRSDRRGNYSCACRVGHTGRDCERDLLPP
SGLHVLRVEDSEVELRWDQSDITQNLISGFAVAYAPIGRGPRKTDFLERQHSTYILQGLS
PGQLYNISTFSVKRNTNSNDISQPAFALIRTRPRKVEQLQVVNVSSSQVWLRWLVQAGRH
AAVSLVRISLVPSDGSSPRTAILNASVTDYTFSSLLPGQMYTVDVLTQSGVHPEDLPSTS
HSAGPLLFWTKPLPPQNLSLSYVSTTSARVTWDRHPRSVPDGFVVNVTRGLSTRSRYLPD
GALGTYTLRDLSPGQHYRLALTAIRNTGQEQIHSVAQHLAFTTLPLEEQGKGERAQGGRD
TTSGRPVVRPKLQDLSTDKDRELSEELPRYTELIDGRGRITAKFTNLPRKAIRHRTKPEP
PVKLERMEETTNKISLALEIPEEATRRKSESQRDCRSHPCQNGGTCVHSSDTHSCDCPNS
FKGRQCELYCQRIPHPCTRLYSETKSVPVWEDGVCHYLYKRTYKVQQDVCYREICEPLLP
KKTPNRRPQRLQQ
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcctactcttgccctgcctgtgctctctgttgttttgcctgaggctgccgggc
ggcgtggagccggctgtcccgctgcatgacttctacccctttggcgaggaacatggggac
actgtgaccatcaagcaggacgacggaggttcaggattggtggacatctctgtggcgttc
ccgttcttcggagactggcacaatggactctatgtaaacaacaacggtctggtctccttt
ctgagggaagtgtcccaattcactccagtggctttccccatcgccggagatcgacgggtg
gtcgccccattctgggctgatgtggacaaccgacaagctgggaaggtgttttacagagag
agcaaagaccctgccatcctcaagagatctacagaagatatccatctatatttcccagaa
ttccccttgttctcagccacttgggtcctcgtcgccacatggcatcaggtcacatatttt
ggtgggagctcaatcactccggtgaacaccttccaggtagtgctgatcacagacagcaag
ctttcattcaccatttttcactaccacaacatcacctggaccacaggaatgcatgccagc
agtgggggtgatatcgccggcctgggtggaatcgctgcacaggcaggttttaatgccgga
gatggaaagcgatatttcaacattcctggctcacgcacagatgatgtcgtggaggtagag
accaccacaaacgtgggctatccaggccgctgggtcttccgcattgatgatgcccaggtg
caggtgggcagctgcaatgactcagcttctgtctgcccaaatctgaggccctgtctgaat
ggcggccgctgcattgatgactgcatcactggaaacccttccttcacttgctcttgcttg
gctggcttcactgggcgcaggtgccagatagaagtggatgagtgttcctcgtacccgtgt
cagaatggagggacgtgtgtggaccggatcaacagcttcatttgccagtgtccacctggg
tttacaggaagcttgtgtgaaacagacattgacgagtgccaagagagtccatgcctcaac
ggagcgcggtgcatcgagggtgtcggcagcttcacctgtgaatgccaggcaggttacacc
gggcccgtgtgtgagacagacattaacgagtgtgagtccatgccatgtctgaacggaggg
gtgtgcgaggaccgggtgaataactacacctgcacctgcttggctaacttcactggacgc
cactgtgagacacagatagagacagtagagttagtggttgtgaccaattcctccagtact
gatggtgtaaatcagacagcttcctgtgagggacaggactgcgagagccggcggagctgc
aagaatgtcggccctggaagtttcgagtgcacctgcaatcctggctactacggcgaaaac
tgcgaagaagagtgcctgtgccagaatgggggtgtttgtgttgatgtaaacggtacctgt
gaatgtccgtcaggcttcactggactctactgtcagtttgaagtaactcagaccccatgc
agtaacaacaggccatgtccggacgggggcccgtgtctggagtacggaggcacgtatctc
tgcacgtgccaaactggcatcgacttcgaccacaaggatgcctacccttatgtacagccc
cgatcggcctgcgattcctcgccgtgtcagaatggaggatactgctatgagcgcgacgga
ggatacgtctgcgagtgcaagcacggctaccgggggaaacactgtgaaatagtcagatta
agtatgtgtgcctctagcccctgccggaacggaggatcctgtaaggaggaagctggcagc
taccactgcgcgtgtccgtacagatttactgggaaacactgtgaaacgggaaagccagac
ccctgtgcggcgggtccgtgcatgaatggagggacgtgttttcactacattgggaagtac
aagtgcgagtgctctggatcctacatgggacgacattgtgagatcagcagaggagcaaat
tcagcttcggacggacgagactgtggaccccctcctaaggtgaagcatgctgaggtgcag
ttttcctccaccagcccgggttctatagcactgtacgcctgccacccaggatacacaccg
gtacccagggccacccagagcatctgcagcagccagggctcctggagtcagccccccgtc
tgcgaagaaataaacgagtgtttgtctcagccgtgtatgaatggaggcacgtgtcgggac
agggtggcatcctttctgtgcgagtgtgagtctgggtttaccggcctgcgctgtcagaca
gatcttgatgagtgtctctcggagccgtgtaaacacggaggaacttgtgaggaccagccg
ggctcctacttctgccactgccagcagggctacacaggacaggactgtgaaacagagcag
gacgggtgcgagtcgaacccctgtctgaatggaggtgcgtgtcgggggtaccggaggagc
cacctgtgtgtgtgtaaggacgggtactccggggatcgctgccagaccttggagaacccc
tgtgtattacagccgtgcgggacccggggtttctgccgcagtgacaggagggggaattac
agctgtgcctgcagggtgggacacacaggccgggactgtgagagagacctgcttcctccc
tccggtctgcatgtgctgcgggtggaggacagtgaggtggagctgcgctgggatcagtcc
gacatcactcagaacctgatcagcggtttcgctgttgcttatgcacctatcggacgaggc
cctcgcaaaacagacttcctggagaggcagcactccacctacatcctgcagggcctgagc
ccgggtcagctctacaacatctccaccttctccgtcaaacgcaacaccaacagcaacgac
atcagccagcctgccttcgccctcatacgcaccaggccgcggaaggtggagcagctgcag
gtggtgaatgtgtcctcctctcaggtgtggctgcgctggctggtgcaggccggccggcac
gctgcagtcagtctagtgaggatatctctggttccctctgatggcagcagcccacgaaca
gctatcctcaatgccagcgtcacagactacaccttcagttctctgctgccgggtcagatg
tacactgtggatgtgctgacacagagcggagtccacccagaggacctgccctccaccagc
cactccgctggacccctgctcttctggaccaaacccctgccaccccagaacctctccctg
tcctatgtgtccaccacctctgctcgggtcacgtgggaccggcatcctcggagcgtcccc
gacggctttgtggtgaacgtcacgcgtggcctgagcacccggagccgctacctgccggac
ggagccctggggacctacaccctgcgggacctgagccccggccagcactaccgcctcgca
ctgaccgccatcagaaacactggacaggagcagatccacagtgtcgcccagcacctagcc
ttcaccacactacctctggaggagcagggtaaaggcgagagagctcagggaggtcgggac
acaaccagcgggcgtcctgtggtccggcctaaactacaggatctgagcactgataaagac
agagaactctcagaggagctgcccagatacacagagctgattgatggcagggggaggata
acagcaaaattcaccaacttacctcgcaaagccatccgtcaccgaacaaaacctgaacct
ccagttaaattagagaggatggaggaaacgaccaataagattagcctggctctggagatc
ccggaagaagcgacgaggaggaaaagtgaatctcagcgggactgcaggtcgcatccatgc
cagaacggaggaacatgcgtccacagcagcgacacccacagctgtgactgtcctaacagc
tttaagggcagacagtgtgagctgtattgtcagcgaataccacacccatgcactcgtctc
tactctgaaacgaagagtgtgcccgtctgggaggatggagtctgccattatctatacaaa
agaacgtataaagtccagcaagatgtttgttatagagagatctgtgagcctctgctccct
aagaaaactcctaaccgaagacctcaaaggctacaacaataa
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