Astyanax mexicanus (Mexican tetra): 103030749
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Entry
103030749 CDS
T05042
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103030749 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Other domain-containing proteins
Patched domain-containing proteins
103030749 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
103030749
NCBI-ProteinID:
XP_007245466
Ensembl:
ENSAMXG00000010183
UniProt:
A0A8B9GUK7
A0A3B1J554
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All DBs
Position
1:59006294..59035462
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AA seq
896 aa
AA seq
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MLRQAIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTVVFGCAALSRFQPETELEALVAPA
HSLAKIERSLANSLFPIERSKHKLYSDLHTPGRYGRLILLAKAGGGNILELAEQVLHVHR
QVLELRVSHKGFNYTFAHLCVLRHRDRRCVLDDILAVFEDIRAAVLANTTLAKVPVSYPN
TTLKDGRVAFIGHQLGSVVLAPHSRDQQVKSARAIQITYYLRNLRPMVQDAIAEKWENEF
CKLAHRLATASQDLYIQSLTSFSLWRDFHKTGVLAKSEVLVSLVLVLLAATISSSMRDCL
RGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPFFAMGHGTKGVFELLAGWRR
TRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIESVKVFCQSMCVAILVN
YFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWFKTMMSDGHDLSTHHDS
VPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGCLQISDGYNIVNLLASN
SPSVSFALTQQKLFSNYSPVIGFYIYEPIEYWNSTVQEHLKTLGQGFNKISWIDNYFNYL
KVANVSASTKSDFINILKNSFLKSPEYQHFTEDIIFSKNGDEYDIIASRMYLVARTTEKT
REEVVELLERLRPLSLINSIKFIVFNPTFVFMDRYSSSVVSPILTSGFSVLTVLILTFFL
VINPLGNFWLILTVTSVELGVLGLMTLWNVDMDSISILCLIYTLNFAMDHCAPHLFTFVL
ATEHTRTQCIKISLEEHGAAILQNTSCFVIGIMPLLFVPSNLTYTLFKCSLLTTGCTVLH
CFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREREEIECIEVRENPDHVTSV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggcgatccaccgcgggctcaaggcgtccttctactggctcggcctcttc
gtcagccgccaccccgtgttcttcctcaccgtgcccgccgtgctcaccgtggtgttcgga
tgcgcggcgctcagccgcttccagcccgagacggagctcgaagcgctggtggctcccgcg
cacagcctggccaagatcgagcgcagcctcgccaacagtctcttccccatcgagcgctcc
aagcacaagctctactcggacctgcacacgcccggccgctacggccgcctcatcctgctg
gctaaggccggcggcgggaacatcctggagctggccgagcaggtgctgcacgtgcaccgc
caggtcctggagctgcgcgtgagccacaagggcttcaactacacgttcgcgcacctctgc
gtgctgcgccaccgcgaccggcgctgcgtgctcgacgacatcctcgccgtgttcgaggac
atccgcgccgccgtgctcgccaacacaacgctggccaaggtgcccgtcagctaccccaac
acgacgctgaaggatggccgtgttgcgttcattggtcaccagctgggcagtgtcgtcctg
gctccacacagccgagaccagcaggtcaagtcggcccgcgccatccagatcacctactac
ctccgcaacctgcggcccatggtgcaggacgcaatcgcagagaagtgggagaacgagttc
tgtaagctggcgcaccgactggccacagccagccaggacctatacatccagtccctcacc
tctttcagcctgtggcgggacttccacaagactggtgtgctggctaagagtgaggtgctg
gtcagtctggtgttggtgctgctggctgctaccatctccagctccatgcgtgactgtctg
cgtggaaagcccttcctgggcctgcttggcgtgctcactatctgcatcgccaatgtgacg
gccgctggcatcttcttcatctctgacggcaagtttaactccacgctgctcggaatcccc
ttcttcgccatgggacatggaactaaaggcgtgttcgagctcctggctggctggagaaga
acgcgggaaaacttgcccttcaaggaacgagtggcagatgcctttgctgacgtgatggtg
tgctacaccatgaccagctcactgtacatcatcacttttggcatgggtgccagtcctttc
accaacatagagtcagtgaaggtgttctgccagagcatgtgcgtagccatcctggtgaat
tacttctacgtcttctccttctacggctcctgtctggtgtttgccggccagttggagcag
aaccgatatcacagcgtgttctgctgcaagatcccctccgtagagtatcttgaccgccag
cccacgtggttcaagactatgatgagcgacggccacgatctctccacacaccacgacagc
gtgccctatcagaaccacttcattcagcacttcctgagggagcactacactgagtggatt
accaacacatacgtcaagccctttgtagtaatcctctacttgatttacgcctctttttct
tttatgggatgtttacaaatcagcgatggctacaatatagtaaacctattagccagcaat
tcacccagtgtgtcatttgccctgacccagcagaaactgttcagcaactacagccctgtg
ataggcttctacatttacgaacccattgaatactggaactctacagtgcaggagcacctc
aagactctcggccagggtttcaataagatctcgtggattgataactacttcaactatcta
aaagttgccaatgtcagtgcatcaaccaaaagtgattttataaacattctcaagaattcc
ttcctgaagagcccggagtatcagcacttcacggaggacatcattttctcgaagaacggg
gacgagtacgacatcatcgcatctaggatgtacctggtagctagaaccacagagaagacc
agggaggaggtggtggaactgctggagagactcagaccactctccctcattaacagcatc
aagttcatcgtcttcaaccctacctttgtgttcatggaccgctacagttcctcggtcgtt
tcgccaatcctcacatcgggtttcagcgtcctgaccgtcctcatcctgactttcttcctc
gtcatcaaccccctggggaacttctggttgatcctgaccgtcacttctgtggaactgggc
gtcttaggcctcatgacgctctggaatgtagacatggacagcatctctattctgtgcctt
atttatactctcaactttgccatggatcactgtgcccctcaccttttcacatttgtactg
gccactgagcacacgaggactcagtgcatcaagatctcgctcgaggagcacggggcggca
atcttgcagaacacttcgtgctttgtcattgggataatgcccctgctttttgtgccttcc
aacctgacctacacactgttcaagtgctcgctcctcaccactggctgcacagtgttgcac
tgtttcgtcatcctcccggtgtttttgactttcttccccccctccaaaaagaggcacaag
aaaaagaaacgggcaaagaggaaagagcgagagagggagcgggaaagggagagggaggag
atcgagtgcatcgaggtcagggagaaccctgaccacgtgaccagcgtctga
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