Astyanax mexicanus (Mexican tetra): 103030792
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Entry
103030792 CDS
T05042
Symbol
sox8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103030792 (sox8)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103030792 (sox8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
103030792
NCBI-ProteinID:
XP_007232251
Ensembl:
ENSAMXG00000018977
UniProt:
A0A8B9KSC7
A0A3B1INR1
LinkDB
All DBs
Position
18:complement(41020943..41026913)
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AA seq
469 aa
AA seq
DB search
MTEERDKSAAADAPCSPAGTSSSLSPEDSDSDGPCSPTGSLHSMKKLDEDDDRFPACIRD
AVSQVLKGYDWSLVPMPVRGNGSLKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL
SKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGQSDSDSGAEL
SHQMYKAEPGMGGGMAGLGDHHHSDHPGQPHGPPTPPTTPKTDLHHGAKQDLKHEGRRLM
DSGRQNIDFSNVDISELSTDVISNMEAFDVHEFDQYLPVNGHAMGSESSGHGPNPSAYAS
SYGHPGANGSGWNRKGALASSASASSASPGAGDVGHHRPHIKTEQLSPSHYSEHSHGSPS
HPDYTSYGASQSCGTSAANAAAAAAAAAAAAATATSTSFSSSQCDYTDLQSPNYYSPYSS
YPSSLYQYPYFHSSRRPYGGPILNSLSIPPSHSPTSNWDQPVYTTLSRP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagcgcgacaagtccgcggctgccgacgccccgtgcagccccgccggtacc
tcgagctccctctccccggaggactcggactcggacggaccgtgctcccccaccggttcc
ctccactccatgaaaaagctggacgaggacgacgaccggttccccgcgtgcatccgggac
gcggtgtcgcaggtgctgaagggctacgactggtcgctcgtgcccatgccggtgcgcgga
aacggctcgctcaagaataaaccgcacgtgaagagaccgatgaacgcgtttatggtgtgg
gcgcaggcggcgcggaggaagctcgcggaccagtacccgcatctgcacaacgcggagctc
agcaagaccctgggaaaactgtggaggctgctgtccgagaacgaaaagaggccttttgta
gaggaagcagagagactgagggtccaacacaagaaagatcacccagactacaagtatcag
ccgagacgcagaaaaagtgtgaagccgggtcagagcgattctgactctggagctgaactg
agccaccagatgtacaaagctgaacctggaatgggcggcggcatggctgggctgggcgac
caccatcactcagaccatccagggcagccccacggaccaccgacgccaccgacaacccct
aagaccgacctccatcacggagcgaagcaagacctgaagcacgaaggcaggaggctcatg
gactccggtcgccagaacatcgacttcagcaacgtggacatctctgagctcagcaccgac
gtcatcagcaacatggaggccttcgacgtccacgagtttgaccagtacctcccggtgaac
ggtcacgccatgggttcagagtccagcggtcacggacccaaccccagcgcctacgcctcg
tcttacggccatccgggcgccaacggatccggctggaaccgcaaaggagccttggcgtca
tcggcatctgcatcatcggcgtctcccggcgccggcgacgtcggtcaccaccgaccccac
atcaaaaccgaacagctgagccccagtcactacagcgagcactcccacgggtctccctcg
caccccgactacacttcctacggcgcgtctcagagctgcggcacttcggccgccaatgct
gccgctgccgccgctgcagccgccgccgctgctgccactgccacctccaccagcttctcc
agctcccaatgtgactatacagacctccaaagccccaactattacagcccctactccagc
tacccctccagcctgtatcagtacccctacttccactcctcgcggagaccctacggcggt
cccatcctcaacagcctgtccattccaccctcccacagtcccacgtccaactgggaccag
ccggtgtacaccacgctatcgaggccgtga
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