Astyanax mexicanus (Mexican tetra): 103030980
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Entry
103030980 CDS
T05042
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103030980 (gigyf1a)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103030980 (gigyf1a)
Surveillance factors
Other surveillance factors
103030980 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
103030980
NCBI-ProteinID:
XP_022534275
Ensembl:
ENSAMXG00000003316
LinkDB
All DBs
Position
8:complement(15376349..15414950)
Genome browser
AA seq
998 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGTVPAGMARGRGS
VRGGRGRGRGEGGFYQRSTEEVGEVGFNRTVREIHRSQSWDDRGERRFEKPLRREALRVG
FEEVGSGGRKEYMRSDSDNWRTLREEHEQEEVGDLGGSWRLAGSRRDDGGPRSAGWREHS
DGRRRKFDFDFRDGGSEGGRRRAGSEGAEEERDGLPEWCTDEEDGEMGTFDSSGAFMSIK
KGSKDLIPEEEFDFQGLEDEDECIMDGERKNSNGGEKPERGENDCLAVTEVEVKSLPPSS
PPSLTLPTPQSDPVPAAAPSVLEDPQPAPISKMPSEVLPEPLSELSPSASSSLPSSPPSS
SSAATDLPPSGGDPEDDEGLKHLQQEAEKMVAALQDTSLEEECFTQLQESRNTAAALPLS
HDSAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFSMSLLVKRGCDEGFQPLGDVIKMWGR
VPFAPGPSPPPLCNMDQERLKKQQELAAAAALYQLQQQQLFQLINRCGEQGMMPSMNRSM
SVPDTGSMWDMHTSASQPTGGEASIWDLTQGPTLEQLQKLQERREAELRAKREEEERKRR
DEKRRQQEELKRREEEELFRRKQELLMKLLQQAPRQGSTGSGSGWSGGSMSGLGKQGKPL
NNLLDLQQEAERLYKQQHRAPQQQRWGAEGVGALWGSGGMEGKAAGGSSPSGGSMGVWDE
ALKNQSALRNSMGLKNSRSSPSLSDQYMMLNRRKRTEEEDRLLKLFQGMKAQDGFTTWCE
QMLHALNTSTNNSSSQDVATIVTYLKEVESPYEVLDFIRHYLGDTVEAKEFAKQFLERRA
KQKANHQRQQQQLSKEVAGLTMNSFPLQDSMRGMNPTALQSMFQSVHSGKGGMGYDQAAK
LKKKQPMMLHSDPSILGYSFHGAGDRMSLSEMEMVEDY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagacacttaacttcggcccagaatggctccgagcactttccagtggaggc
agtgtgacttcccctcctccctctcctgctatgccaaagtacaagctggccgagtatcgc
tatggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaggatgagcctcagcagcctctggcactggtg
cctctcaccgaggaagagcagcggaacttctccatgtccgttaacagtgtggctgtgctg
aggcttatgggtaaagggggtggcactgtccccgccggcatggcccgtggcagaggcagt
gtgagaggtggccgaggcagaggccgaggagagggagggttctaccaaagaagtactgaa
gaggttggtgaggtgggcttcaacagaactgttagagagatccaccgcagccagagctgg
gatgacaggggcgagaggcgttttgagaagcccctgcggagggaggccctgcgggttggc
tttgaagaagtgggctccggggggaggaaggagtacatgcgttcagacagcgacaactgg
cgcacactgcgagaggaacacgagcaggaggaggtgggagacctgggtgggagctggaga
ctcgctggctcacgtcgagatgatggtggtcctcgctcagcaggttggcgtgagcatagt
gatggtcggcgcaggaagtttgactttgacttccgggatggaggaagtgaggggggaagg
aggagggcaggaagtgagggagctgaggaagagagggatggattgccagagtggtgcaca
gatgaggaggatggagagatggggaccttcgactcctctggggcgttcatgtcaatcaag
aaaggctccaaagatcttatcccagaagaggagtttgactttcagggattggaagatgag
gatgagtgtattatggatggagaaaggaaaaacagcaatggtggagagaaacctgagaga
ggtgagaatgactgtctggctgttactgaggtagaggtgaagtctctccctccttcttct
cctccctccttgactctacccactcctcagtctgatcctgtgccagctgctgccccttct
gttctggaggatcctcagcctgcccccattagtaagatgccaagtgaagtgttaccagag
cccttgtctgagctgagccccagtgcctcctccagtctgccttcatcccctccctcctct
tcctctgctgctactgacctcccgccatcgggaggtgaccctgaggatgacgagggcctg
aagcacctgcaacaggaggcagagaagatggtggcagctctgcaggacacgtctctggag
gaggagtgtttcactcagctgcaagagagcagaaacactgcggctgccctgcctctctcc
cacgactccgccatgaagtggttctacaaagacccacagggcgaaatccaaggccccttc
agcacggtggagatgtgtgaatggtttcaggcaggctacttcagcatgtctctgttagta
aagcgcggctgtgatgaagggttccaacctctgggggatgtcattaagatgtgggggcgt
gtgcctttcgcccccggaccctccccaccaccactgtgtaatatggatcaggagaggctg
aagaagcagcaggagttggctgctgctgcagctctctaccaactccagcaacagcagcta
ttccagctcattaacaggtgtggagagcagggtatgatgccttcgatgaacagatcaatg
tcagtgccagatacagggtccatgtgggacatgcatacctcagcctcacagccgacaggt
ggtgaggccagtatatgggacttaactcagggtccaactctcgaacagcttcagaagctc
caggagagacgagaggctgaactcagggctaagagggaagaagaagagagaaaaagaagg
gatgaaaagcgacgacagcaggaggaactaaagaggagagaagaagaggaactcttcaga
cgcaaacaggagctgctaatgaagctgctccagcaggctccgcgtcaggggagcactggc
tcagggtcaggatggagcggaggctccatgtctgggctggggaaacagggaaagcccctg
aacaacctgctggatctccagcaggaggctgaaagactttataaacagcagcacagagcc
ccgcaacagcaacggtggggagctgaaggtgtgggggcactgtggggttctggaggcatg
gagggcaaagcagcgggaggcagcagtccctctggagggagcatgggcgtttgggacgag
gccctaaaaaaccagagcgccctccggaacagcatgggtctgaagaacagccgcagcagc
ccctctctcagtgatcagtacatgatgctaaatcgacgtaagcgtactgaagaagaagac
cgcttgctgaagctcttccaggggatgaaggctcaggatggcttcactacgtggtgtgag
cagatgctgcatgctcttaacacctcaaccaacaactcctcttcccaggacgtggccacc
atcgtgacgtatctgaaggaggtggagtcgccctatgaagtgctggactttatccgccac
tatctgggcgacacagtggaagccaaagagtttgccaagcagttcctggagcgccgtgcc
aaacagaaagccaaccaccagaggcagcagcagcagctttctaaggaggtggctggactg
accatgaacagcttccctctgcaggattctatgaggggaatgaaccccacagctctgcag
tctatgttccagtcagtgcattctgggaagggggggatgggctatgaccaggcagcgaaa
ctgaagaagaaacagcccatgatgctgcactctgacccaagcatcttaggttactcattc
catggtgcaggggatcggatgagcctgagcgagatggagatggtggaggattactga
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