Astyanax mexicanus (Mexican tetra): 103031021
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Entry
103031021 CDS
T05042
Symbol
arhgap45a
Name
(RefSeq) rho GTPase-activating protein 45 isoform X1
KO
K26415
Rho GTPase-activating protein 45
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103031021 (arhgap45a)
Membrane trafficking [BR:
amex04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
103031021 (arhgap45a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
FCH
Vir_act_alpha_C
Wound_ind
DUF7623
Motif
Other DBs
NCBI-GeneID:
103031021
NCBI-ProteinID:
XP_022534568
Ensembl:
ENSAMXG00000018912
LinkDB
All DBs
Position
4:complement(48879539..48919994)
Genome browser
AA seq
1109 aa
AA seq
DB search
MFRKRKELTKAPSISKKNQSGSPVPHSTLLSVLQEQPHRDTTDGLSTLALPDSIPSSCPS
TPSIHSKLGGCSSPAPNLKRPTALSRHASAAGFPFQTAGTWGFNKAHGRAALAQSPTLEN
AEGTVIDVEEIPPLLRDVARFADAVEKLKDVVLVEEKESRRAVAHECLGKVLRVLRQVIS
TYPLLNTVETLTAAGTLISKVKGFSYEGSNEAQKKDFEKAIETIAVAFSSNVSELLMGEV
DSSTLLSLPPTEKSRSMENLCGSSAGQGMDGGGGCDHEDCMMSPEEVDILLQHSEGGVDC
ALSYAKTIAKYMKDIINYVDKRIALEMEFAKGLQRLYHSSKQSISQNHMPLLSIYSLALE
QDLEQSVGVQQSTNSVLFHSFLQPLMQRKQEHEKKRREIKELWQRAKRKLADAENNLRKA
RGWYLTRCEEYEKARSVANKVEEEHGGTGSGSTNKALDRKRRLEEEARNKAEEAEATYKT
CIADATTQQQELEDVKVNVLKQIQDIIRQSDQILRACTISYYQILHMQTAALPVHYQTLC
ESCKLYDLGQQYAAHVKNLHLSAERITVYQFEPYSASSSQHVRTRHDSLTEDQRQSSQST
EATSPSEEGVPGDSGTVKHRRGRGHQAHKSWPSTLSDTDSVGGGSGLGSPTTSTGDVSKA
SRPVSAGTLSSNEDLDDQDGNMASFEQSMNGIEPEMTVSTGPFRNVGLSKAAKTHRLRKL
RTPSKCRECDSYVYFQGAECEECFLACHKKCLESLAIQCGHKKLQGRLQLFGRDFSQVLQ
GNTEGVPFIIKKCIQEIERRALKMKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHD
ISNVLKLYLRQLPEPIMPFRMYNALMGLAKESLHSKGGEGVKGPELEDLGPQTDPKVITL
VEKLRELLKDLPSTNIGTLKCIIRHLRRVAQLEQDNKMSPSNLGIVFGPTLMRPRPTGAT
VSLSSLVDYPHQARIVEALIIFQEHIFISSDYSSGITFTCQRQESADGTPEGEEDQSRLI
TEQDCGNSLGSSGSRERSLDSDSDPEDLGKGSKRRPPLVSQESETSTEDDQLSPRVSLDL
STIVPETIPEQPVSTPDSEPGDSEQLSDQ
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggaagagaaaggagctcactaaagcgccttccatctctaagaagaaccagtca
ggaagtcctgttccgcacagcaccttgctctccgttcttcaggaacagcctcacagagac
actaccgatggtctgtccactctggccctgccagactccatcccttcctcatgccccagc
actccatccattcactccaagctgggaggatgctcctctccagccccaaacctcaagcgg
cccacagcactgagccgccacgccagcgccgccggcttccccttccagactgctggaacc
tggggcttcaacaaggcccatggcagggcagctctggcccaaagcccgaccttggagaat
gcagagggcacagtgatcgatgtggaggaaatccctcctctgctgagggatgtggcccgc
tttgcagatgctgtagagaagctgaaagatgtggtgcttgtggaagagaaggagtctcgg
agggcagtggctcacgagtgcttggggaaggttctgcgggtcttgcggcaggtgatcagc
acctaccctctgctcaacactgtggaaacactcacagctgcaggaacactcatctccaag
gtcaaaggcttcagttatgaaggcagcaatgaagctcagaagaaggatttcgagaaagcc
atcgagaccatcgcagtggccttcagcagcaatgtgtcagagttgctgatgggggaggtg
gacagcagtacccttctatccctgcctccgactgagaaaagcaggtccatggagaacctg
tgtggatcttctgcggggcagggaatggatggaggtggaggatgtgatcatgaggactgc
atgatgagcccagaggaagtggatatcctgctgcagcacagtgagggtggggtggactgt
gcactgtcctatgcaaaaaccatcgctaaatacatgaaggacatcatcaactatgtagac
aaacgcatcgctctcgagatggaatttgctaaaggtctgcagaggctttaccattcgagc
aagcagagcatcagtcagaaccacatgcctttgctctctatttattctctggctcttgag
caggacttggagcagagtgtcggggtgcagcagtccacgaactctgtcctctttcactcc
tttctacagccgctgatgcagcgtaaacaggagcacgaaaagaagcgtagagagattaaa
gagctgtggcagagggccaagaggaaactggcggatgctgagaacaacctgcgtaaggcc
cgggggtggtacctgacccgctgtgaggagtacgagaaggcccgttcggtggccaataaa
gtggaggaagagcacggcggaacaggaagtggctccaccaacaaagcgctggacaggaag
agacgactggaggaggaagctcgcaacaaggcagaggaggctgaagccacatataagacg
tgtattgcagacgccaccacacagcagcaggagctggaggatgtgaaggtgaacgtgctg
aaacagatccaggacatcatcagacagagtgaccagattctgcgggcgtgcaccatctcc
tactaccagatcctgcacatgcagacagctgcgctgccagtgcactaccagactctgtgt
gagagctgtaaactgtacgatctgggtcagcagtacgccgctcacgtcaaaaacctgcat
ctgagcgcagagcgcatcacagtctaccagttcgagccgtactccgcctccagctcacag
catgtccgcacacgacatgacagcctcactgaggaccagcgacagagctctcagagtacg
gaggccacatcccccagtgaggaaggagtgcctggagacagcggcacggtcaaacacaga
agaggccgaggtcatcaggctcataagtcctggccatctaccttaagtgatacggatagt
gtgggcggaggaagtggactgggttctcccaccaccagcacaggagatgtctcaaaggct
tctcgcccggtttcagctggaaccttgtcgtccaacgaggacctggatgaccaagatggg
aacatggcttcttttgaacaaagtatgaatggaattgagccggagatgactgtgtccacc
gggccatttcgaaacgtgggtctgtccaaagctgccaagactcatcggcttcggaaactc
cgcacgccgtcaaagtgccgcgagtgtgacagctatgtgtacttccagggagctgagtgt
gaggagtgtttcctggcctgccataagaagtgtcttgagtccctggccatccagtgtggt
cataagaagctgcagggccgactgcagctgttcggccgagacttctcccaggtgctgcag
ggcaacactgagggcgttcccttcatcatcaagaaatgcatccaggagattgagaggagg
gcactgaagatgaagggaatctaccgtgtaaatggagtaaagacgcgtgtggaaaagttg
tgtcaggcctttgaaaatggaaaagaactggtggaactttctcaggcttctccccacgac
atcagcaatgtgctcaaactctacctgcgacagctgcccgagcccatcatgccgttccgc
atgtacaacgcgctgatgggattggcgaaggagagtctgcattctaaaggaggagagggg
gttaaaggcccagagctggaagacctgggaccacagactgacccgaaggtgatcactctg
gtagagaaactcagagaactgttgaaagatctcccatccaccaacatcggcacactgaaa
tgcatcatacggcatctacgcagagtggctcagctggaacaggataataaaatgagcccc
agtaatctgggaatcgtgttcggaccgacgctgatgagacccagacccaccggtgccacc
gtctcgctctcttctctggtggattacccacaccaggcacgcatcgtggaagccctcatc
atctttcaggagcacatctttatctcttctgactactcatctggtataaccttcacatgt
cagagacaggagagtgctgatggaactccagaaggcgaggaggatcagagcagactgatc
acagagcaggactgtggtaactctctgggctcgtccggttcccgggagcgctctctggac
tcggactctgatcccgaggatctggggaaagggagcaagcggcgcccccctctggtcagc
caggagagtgagaccagcacagaggacgaccagctgagtcccagagtcagcctggacctg
agcaccatcgtaccagagaccatcccagagcagccggtcagcacacccgactctgagccc
ggagattctgaacagctctcagatcagtaa
DBGET
integrated database retrieval system
