Astyanax mexicanus (Mexican tetra): 103031060
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Entry
103031060 CDS
T05042
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103031060 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103031060 (ttc37)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
103031060 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_17
TPR_19
TPR_14
TPR_16
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_9
ChAPs
HAT_PRP39_N
ARM_TT21_C
TPR_15
DUF7017
COG4_N
HAT_Syf1_CNRKL1_N
TPR_30
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
103031060
NCBI-ProteinID:
XP_022523144
Ensembl:
ENSAMXG00000007850
LinkDB
All DBs
Position
22:25464301..25487990
Genome browser
AA seq
1566 aa
AA seq
DB search
MSTKEVKASLKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGVAASELEQPDQAQ
SAYKKAAELEPEQLLAWQGLANLYEKSDQEDFKAELPKIYQKLITLYETSDKVKCFEVSK
KLVDIYQAENNYLKVARVWLRLIQVREAEEGVENFELLGLWREMIKQLQGTVEMQDNETQ
QHLLSAFEKALQLTENIPGEDHQQITEDYIKYLSKLPHEVAKLKEVCATMLTLYPKDTYP
LAVLGEHYLLSDDCSEDAVSCYTRLLEMDPVSSLAHFGLGLKSLQDQKYEDAAKCFGLGL
RRMGSSVFGLYNLAQAELKMHKYSDSAFSSYQGLKVCTGYDKDWTQKLQRVRLEALVRVG
TEQSAEEALEMLSQMADLINDPALLALKGRAFLQKGQLAEAFQVSSELLSSHPQSVEGLT
LKGLTHTAKDEHQLAEKSFLEALSQNPDSGELYFLLGQLYWNMGEETRKDRSKAHTHLLK
AAKLDPRLGSVFCYLGRYYREVAKDLGRARGCYKRAFELNSTDAEAGAATVDLSMEQGDM
DSALAVLQSVTERATPGSAKWAWMRRGLYYLKVGQHQQAISDLQAALRADPQDWVCWECL
GEAYLNRHSFTAALKTFAKAHLLQPSSIYSLFQMAAIKQILGRFKEAAGEYLQIIEREEY
VPALKGLGECLLSLAKSAMEDCLDGKAVDLIQEAIKYLFRALQKRPDLSCLWKLLGDACT
NCSNVSPNRASAMVPGALCGAEPQDQNHMLNQKQLLCLGERCYGHALKLMSDAPGLWCDL
GLNYYHQARLLPSQLSEQDVQQLLEKALQCVKKAVMLESGNHTYWNALGVVAMAKGIENF
ALAQHSFIKSVKVEANNVVAWTNLGTLYLKKNNIELAHEAFKIAQSLEPLYVNCWIGQAL
IAETVGSYDTMDLFRHTTELSTHTEGVKGYAHWVCSTLLDKSNRDSELYRYNIVQMNAVS
SAQVALTKYTERIQTDADAFVMLGFLNEHLQLKKQATEAYKRAVELLQNSPHIEELSFAV
RGYARALCDTEQSEEAIQHYSSTPLEELHDLTGLALACFRAGHLQKSLNAYEKALEVASS
EKEKAYILTALALLQHRLGNMDTAKTLLFKCSLLKEPVPESLECLCALGLVHGDITLATA
ALSELLKLEGAVGGAVEERCLLTCTLLALQGNYSAVQREASRAVFRNPGNPSLWALLSRL
VPQYCPSKADGGAMAGSVACHASMTLGKRALLYSGVNQLASGRNSWEDKRRNALKTIQRA
VLLCPDDPAGWAALMAACHTENTACALSGSTPCRKGLDKVLMTMVSEKVKGLPKEDMLLA
QALEGWILQQTVSGLKQSCLYNEAEALCLQVLSVSPEHPAVILLLRQVQCECLLCSDAGK
CIPTAVLEQLSAAVMANPTSVSAWHWLADVYSSHGFLAQASVVLRQSLQLASQLGHYTGK
IGSLLRLALLALRPCMAGVGGTEWKDLVREACTEVLKLGPSPPAMLIQALLQYSIKMGAR
ETRRLLEKIVYGPCSAEARTVTSVARWYLLRHLHAKDDLELIDTLMVEAEAAGDLRLLEF
HKRLYP
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtctactaaagaagtgaaggcatctttaaaaagtgccagagaggcaatcaaaaacaag
gagtttaaagaagctctgaaacactgtaaggctgttctgaaactagagaagaacaactac
aatgcctgggtttttattggagttgcagccagtgagctggagcagccagaccaggcccag
agtgcctacaagaaggcagcagaactggagcctgagcagctgcttgcatggcagggcctt
gcaaatctgtatgaaaaaagtgatcaagaagacttcaaagctgagctgcccaaaatttat
cagaaactcataacgttatatgaaacttcagacaaagtcaaatgctttgaagtgagtaag
aagttggtggacatctatcaggctgaaaataactatttaaaggtggcaagagtgtggctg
cgactcatccaggtgagggaggcagaggaaggcgtggagaatttcgagctgcttggactt
tggagagaaatgatcaagcagctccagggcactgtggaaatgcaagacaatgagactcag
caacatctcctctctgcttttgaaaaagctctccaactaacagaaaacataccgggtgag
gaccatcagcaaatcacagaagattatatcaaatatctttcaaaacttcctcatgaagtg
gcaaagctgaaagaagtgtgcgcaaccatgctgaccctctacccaaaagacacctatcct
ctagcagtactcggagagcattatctgctgtcagatgattgcagtgaagatgctgttagc
tgctacactcgtctgctggagatggacccagtcagttcactggcccactttggactgggt
ctaaagtctcttcaggatcagaaatatgaagatgctgccaaatgttttggccttggactg
agacgaatgggctccagtgtctttggcttgtacaacctcgctcaggctgaattaaaaatg
cacaaatattctgacagtgccttttcctcataccaagggctgaaggtgtgcacaggttat
gataaggattggacccagaagctgcagagagtgagactggaggcccttgtgagagttgga
acagagcagagtgcagaggaagctctggagatgctttctcagatggcagatttaatcaat
gatcctgcactgttagctttaaaaggaagagccttcttgcagaagggccagctggcagaa
gcgtttcaggtttcttctgagttgctgagctcacatcctcaatctgtagagggattaacc
ctaaagggactgactcatacagctaaagatgagcatcagctagcagaaaagagctttcta
gaagctctgtcgcagaatccagacagtggggagctgtatttcctccttggccaactgtat
tggaacatgggggaggagacacgcaaagacagaagcaaagcccacactcatctactgaag
gctgctaaactggacccccgtctgggctcagtgttctgctacctgggccgctactacagg
gaggtggccaaagacttgggccgagccagaggctgttataagagagcatttgagctgaac
tcaactgatgctgaggctggagctgctactgtggacctcagcatggaacagggagacatg
gactctgctttagcggttctgcagtcagtgacagagcgagcaactcctggttcagccaaa
tgggcctggatgaggagaggcctgtactaccttaaagtaggccagcaccagcaggctatt
tcagatcttcaggcagcattgcgggctgatcctcaggactgggtgtgttgggagtgctta
ggggaggcttacctgaatcgccacagttttactgctgccctcaaaacttttgccaaggcc
caccttctccagccaagctccatctacagcctctttcagatggctgcaatcaagcaaata
ctgggcaggtttaaagaggctgcaggagagtatctgcagattattgagagggaagaatat
gtgccagctctgaaaggtcttggtgagtgtcttttgtccctggctaagtctgcaatggag
gactgcctggatggtaaagcagtagacctgatacaggaagccatcaagtacttgtttagg
gcactccagaagcgtccagacctgtcctgcctgtggaagttgttgggtgatgcctgcact
aactgcagtaacgtgtcgcctaaccgggccagtgcaatggtgcctggggctttgtgtgga
gctgaaccgcaagaccaaaaccacatgctgaaccaaaaacagctgctgtgtctcggagag
agatgttatgggcatgctctgaaactgatgtcagatgccccaggtctgtggtgtgatctg
ggcctcaactattaccatcaggccaggctgctcccttctcagctctcagaacaggatgtc
caacaactgctagagaaagctcttcagtgtgttaagaaagcagtcatgctggaaagcggg
aatcacacttactggaatgcactgggagtggtggccatggcgaaaggaattgaaaacttt
gcccttgcgcagcacagcttcatcaaatcagtcaaagtagaagcaaataatgttgtagca
tggacaaaccttggaaccttatatctgaagaaaaacaacattgagcttgcccatgaggct
tttaagattgctcagtctttggagccgctgtatgtcaactgttggattggacaggctctt
attgctgagactgtgggcagttatgacaccatggacctctttagacacaccactgagctg
agcactcatactgaaggggtgaagggttacgcccactgggtctgctccactctattggac
aaaagtaaccgagactctgagctttatcgctacaacatagtccagatgaacgctgtctca
tcagcccaggtggctttaacaaagtacacagaaaggatccagacagacgctgatgcattt
gtaatgctgggctttctaaatgaacacctgcagctaaagaaacaggccactgaagcctat
aagagagcagtggagttactccagaacagcccccacatagaggagctcagctttgctgtc
agaggctatgcacgggcactttgtgacacagagcagtcggaggaggcaatccaacattac
tcctccacacctctggaggagctgcatgatcttacaggactggctctggcctgcttcagg
gcaggacatttgcaaaaaagccttaatgcctatgagaaggctcttgaagtggcctccagt
gagaaggagaaggcatatatactgacggccttggctttactgcaacacagactgggaaac
atggacactgccaaaactctgcttttcaagtgttctttgctgaaggagccagttccggaa
agtctggagtgtctctgtgctctgggccttgttcatggagacatcacactggccactgct
gctctttcagagctgctgaagcttgagggagcagtagggggcgctgtggaggagcgctgt
ctgctcacctgcaccttactggctctacagggcaactacagcgctgttcagagagaggcc
tccagggctgtgttcagaaacccaggaaatccatcactttgggctctgctgtccagactg
gtgccacagtactgtcccagcaaagctgatggaggtgctatggcgggcagtgtggcatgc
catgctagcatgactctgggaaagagggcactgctgtacagtggagtgaatcagctggcc
tctggcagaaactcttgggaagacaagagacgaaatgctctgaaaaccatccagagagct
gtgctgctctgtcctgatgatccggcagggtgggcggcgcttatggctgcgtgtcacact
gagaacacagcatgtgctctctcaggctccaccccttgcaggaaggggctagacaaggtg
ctgatgaccatggtgtctgagaaagtaaaaggcttgccgaaggaagacatgcttttggct
caagctctagagggctggattctgcagcagactgtgagtggactcaaacagagctgcctg
tacaatgaagctgaagccctctgcttacaggttttgagtgtgtcccctgagcatcctgca
gtgatcctattactgaggcaggttcagtgcgagtgccttctgtgctctgatgccggtaaa
tgtataccaaccgcagtgctggagcagttaagtgcagctgttatggccaaccccacctca
gtgtctgcctggcattggctagcagatgtttacagctcacatggttttctggcccaggcc
tctgtggtcctcagacaaagcctccagttggcctctcagctgggccactacactggaaag
atcggaagcctcctccgactggccctgctcgctctcaggccgtgcatggctggtgttgga
ggaactgagtggaaggacctggtgcgggaagcctgtactgaggtgctgaagctgggcccc
tctcccccagccatgctcattcaggctctgcttcagtattccatcaagatgggtgccagg
gaaacgaggcgtctgctggagaagattgtatatggcccatgttcagctgaggccagaact
gttacatcagtggctcgctggtacctcttgcgccacctacatgccaaagatgacctggag
ctcatagataccctgatggtggaggctgaagcagcaggagacctcaggctgttggagttc
cacaaacgtctttacccatga
DBGET
integrated database retrieval system
