Astyanax mexicanus (Mexican tetra): 103031193
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Entry
103031193 CDS
T05042
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
103031193 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103031193 (lsp1a)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
103031193 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
103031193
NCBI-ProteinID:
XP_022527856
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Position
2:62690247..62736733
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AA seq
589 aa
AA seq
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MSSAILRRNSSKQGLQNLLRVTAQRSIEDAEEIERERRRRARESLRKERSLTGSSGSPQD
GSGPTEECLYHSGLKPSSPGGLEEDEGFSDWTQRLERDRRARQEENGPREEDLEVERTMN
GATKREDKISSSVLTQPLKAQYQVEEEEEYQPVKKSSVKRMQFGERQSSFKDKEAEEWKE
EVTRINKRQEEDPRPHAEEKVKRQEVKVSYTSKVFLQHDRMPSANNEDTAGEEVTSQLFK
TKKTVSRNTGQTSEPREPAEGNLETEQKLEKIRRSHQEKESQELEHLRLRQAEAEVELEE
LKRKREERRRVREEEERRREEEEHLRLVKEEDEKRQMKEDIERRRMEAAEKRMKNLSTSS
PDKDDSFNPLSPKSHTNKREHEERLTAENTCLITERTESLNRSLKKSNSFKKTQPPVLLS
KIDDRLEQYTHAVEISAKEPKTVKAAAVDMPSVPEPVTAKKNLFEAGEAWNQTTFKGTPS
KDTEGLKVAVAERITQWVKGSPESGNKNMPSKPSDVKAGDVLQKKNMWEIIGEGSAGGQS
GAAGKNTSAGKRYKFVVTGHGKYEKISIDDDQYDGYTNGKSSDLCQSDL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgcaatcctgagacgaaactcgagcaagcagggcttgcagaacctcctgaga
gtgacagcccagcgcagtatcgaagatgcagaggagatcgagagggagcggcggcgcagg
gctcgagagtctctccggaaggaacgaagcctcactggatcttctgggtcccctcaggac
ggctcgggaccaacagaggagtgcctttatcacagcggtctgaagcccagcagccctgga
ggtctggaggaagacgaaggcttcagtgactggacccagagactagagcgagacagacga
gccaggcaggaggagaacggccccagagaggaggacctggaggtggaaagaaccatgaac
ggagcaacaaaaagagaagacaagatcagctccagcgtactgactcaaccacttaaggcc
caataccaagtggaggaagaggaggagtaccagcccgtgaagaagagcagtgtgaagcgg
atgcagtttggagagagacagagcagcttcaaggacaaagaggcagaagaatggaaggaa
gaggtgacgagaataaacaagagacaagaggaagatccaagaccacacgctgaggagaag
gtgaagagacaggaagtaaaggtctcatacacatccaaagtcttcctgcagcacgacagg
atgcccagtgccaacaatgaggacactgctggagaggaagtgacttcacagctgtttaaa
accaaaaagactgtgagcaggaatacgggtcagacctctgagccgagggagccggccgag
gggaatctggaaacagagcagaagctggagaagatccggcgaagccaccaggagaaagag
agccaggagctggagcatctccgcctgcggcaggccgaggccgaggtggagctggaggag
ctcaagaggaagagagaggagagacggagagtccgtgaggaggaggaacgcaggagagaa
gaagaggagcatctgaggctggtgaaggaggaggatgaaaagaggcagatgaaggaggat
attgagaggaggaggatggaggcagctgagaagaggatgaagaacctgagcacatccagc
ccagataaagatgattcctttaaccctcttagtccaaagagtcacactaataagagagag
catgaggagagattgacagctgaaaatacatgcttgattacagagagaacagaatccttg
aatcgatctttaaagaaaagcaacagttttaagaagactcaaccaccggtactgctgtcg
aagattgatgacagactggagcagtacactcacgctgtggagatctcagcaaaagaacca
aagacagtcaaagcagctgcagtggacatgcccagtgttcctgaacctgtcacagccaaa
aagaatctgtttgaggcaggagaagcctggaaccagaccacattcaaaggaactccatca
aaggacactgaggggctgaaggtagctgtggctgaacgtatcactcagtgggtgaaaggg
agcccagagagtggcaacaaaaacatgccctccaaaccatccgatgttaaagcaggagat
gtgctacaaaagaagaacatgtgggagatcataggagagggatcagcaggagggcagtca
ggagctgcagggaagaacacctctgctggtaaacgctacaaatttgttgtgactggccat
ggcaaatacgagaagatttccatcgatgatgaccagtatgatggctacacaaacggaaaa
tcgagtgacctgtgccaaagtgacttgtaa
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