Astyanax mexicanus (Mexican tetra): 103031481
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Entry
103031481 CDS
T05042
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103031481
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Other domain-containing proteins
Patched domain-containing proteins
103031481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
ACR_tran
APD1-4_N
Motif
Other DBs
NCBI-GeneID:
103031481
NCBI-ProteinID:
XP_049331843
Ensembl:
ENSAMXG00000032259
LinkDB
All DBs
Position
3:14634846..14640594
Genome browser
AA seq
868 aa
AA seq
DB search
MGSCNTNCVEKPLSLGFRKFGRCVGKYPWCFFILPLIIAAGLGGGFYFLSERESNDIEEQ
FTPKDGLAKAERTFVKDNFPTTQAFSQLRLYTEGTYASLIITSSANILTVDAFREILDLD
GKVKKITAGNSLTFESLCAKTGNKCMTNNILNIINYNASQIADTAINYPLNNNVFLGTEI
GGVTLKSDNLTIESAKAIRLYYFLKDKITNETDEWLLTFLNVFSEDPASQTLSVSYFTSM
SRQEEFKKSPKTVIKFFSVTYFLAIFISVMSCLRLDCVRNKVWVATFGVLSAGLAVLSSF
GLLLLCGMPFAMTVATSPFLILGIGVDDMFIMISSWQKTNVHDDVEKRLAKTYEEAAVSI
TITTLTDVLAFYIGLMSSFPSVQSFCIYTGTAILFCYIYNITFFGAFLAFNGRREKSNRH
WLTCMVVDHPKPDSKNSICSVGGAYDPVTETEEEMPVNSFFKTHYGPFLTKPWTKVGVVL
IYAVYLAGSVYGCIQMKEGIELKNLAPDNSYVAKYYDNQGEYFSDFGPNVMVVIKDDMFQ
YWNESARQELNTCLEQFQKLDMVATDMTTFWLSYYLQYGEKVNVSLSVKSTFFSNLRLFL
IVSGFSQDLNLSYVSQRIYASRFFVQTVNIRTAVDEKNMLNAFRQTAEDCSVPLLVYHPA
FIYFDQYAVIISNTIQNVLVATLVMLCISLLLIPNPLCSLWVTFAIASVICGVAGFMALW
DVNLDSISMINLVICIGFSVDFSAHISYACVSSKANTANEKVIDALYNLGYPIIQGAVST
VAGVVVLAAAESYIFRTFFKIMFLVILFGALHGLVFIPVFLTFFGICCKKSEVTNDNEPI
EELSERSRSARIKEMHAYDNPYMNYKRS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggggagctgcaatacaaactgtgtagagaagcccctctctctgggctttaggaagttc
ggacgctgtgtgggaaaatatccgtggtgtttttttattttgccgcttattatagcagct
ggtctcggaggcggattttattttctctctgagcgagagtcgaacgacatcgaggagcag
ttcacaccaaaagatggtctcgccaaagcagagaggactttcgtaaaagacaatttccca
acaacacaggctttctctcagctccggctgtacaccgaaggcacatacgcctcgctaatc
atcacgagcagtgctaacattttaacagtagacgctttccgagaaatccttgatttggat
ggaaaggtaaaaaaaatcactgcagggaattctttgacttttgagagcctttgtgccaaa
acaggcaacaaatgtatgacaaacaacatcttaaatattatcaactataatgcaagtcaa
attgcagacactgctattaattatccgctcaacaacaacgtgtttttagggactgaaatc
ggtggtgtgactctaaaatctgacaacctcacaattgaaagtgcaaaagctatcagactc
tattatttcctgaaagacaaaattacaaacgagacggacgaatggctgcttacgtttctg
aacgtgttctcagaggatccagcgtcacaaacgttatccgtatcatattttacttcaatg
tccagacaggaggaattcaagaagagtccaaaaacagttataaagttcttctctgtgact
tatttcctggccattttcatctcagttatgtcatgtttacggttggactgcgtcaggaac
aaggtgtgggtggccactttcggcgtgctgtcggccggtctggccgtgctgtctagcttt
ggattacttttgctctgtgggatgccctttgcgatgactgtcgccacttctcccttcctg
attctggggatcggcgtggatgacatgttcatcatgatctcctcctggcagaagactaac
gttcacgatgacgtagaaaagcggctagcaaagacgtacgaggaggcagcagtgtcaatc
accatcaccacgctgaccgacgtgctggctttttacatcggcctcatgtcatcgttccca
tcggtccagtccttttgcatctacacgggcactgccatcctgttctgctacatctacaac
atcactttctttggtgctttcctggcttttaacggcagacgagaaaagagcaacaggcac
tggctgacctgcatggtagtggaccatccaaagcctgactccaaaaacagcatctgctca
gtagggggcgcctatgaccctgtcacagaaacagaagaggaaatgcccgttaactcattc
tttaagacacactatggtccatttttaacaaagccctggaccaaagttggggtggtgctc
atttacgctgtgtatctagctggcagtgtctacggctgcatacaaatgaaggagggtata
gagctgaagaacttagcacctgataactcgtatgtggccaaatattacgataatcaaggc
gagtacttttcagacttcggtcccaacgtcatggtggttattaaagatgacatgtttcag
tattggaacgaaagtgctcgtcaggagctgaacacctgtcttgaacagttccaaaagcta
gatatggtagctacagacatgaccaccttctggctcagttactatttgcagtatggtgaa
aaagtgaacgtcagtctttctgtcaagtcaacgttcttcagtaatttacgtctattcctg
atagtgtcagggttcagtcaggatcttaacctcagttacgtctctcagcggatttatgcc
tctcgatttttcgtccagaccgtgaacatcagaaccgcagttgatgaaaagaacatgctg
aatgctttcaggcagaccgctgaggactgttcagttccattgctggtgtaccacccagcg
ttcatctatttcgaccaatatgccgtcatcatcagcaatacgattcagaatgttttagtt
gctactttggtcatgctctgcatttctctcctgttgatccctaatcccttgtgctctctg
tgggtgacgtttgctatcgcctccgttatttgtggagtggctggcttcatggcgctgtgg
gacgtcaacctagactccatatccatgatcaacttagttatctgcattggcttctctgta
gacttttccgctcacatttcctacgcttgcgtttcgagcaaagctaatacagcaaacgag
aaagtcattgatgcgctctacaaccttggctatcccataatacagggagccgtctctacg
gttgcaggtgtagttgttctggctgccgctgagagctacattttccgaaccttctttaag
atcatgttcttggtcatcttgtttggggcgcttcatggactcgtattcataccggtgttt
ctcacgtttttcggaatttgctgtaagaagtctgaggtcacaaacgacaacgaaccaatt
gaagagctgtcagaacgttctagaagcgcacggatcaaagagatgcatgcgtacgataac
ccatacatgaattacaaacgtagctaa
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