Astyanax mexicanus (Mexican tetra): 103031489
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Entry
103031489 CDS
T05042
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103031489 (siah2l)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103031489 (siah2l)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103031489 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
103031489
NCBI-ProteinID:
XP_007244503
Ensembl:
ENSAMXG00000007046
UniProt:
A0A8B9JSF1
A0A3B1JH33
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All DBs
Position
17:complement(17126764..17168573)
Genome browser
AA seq
348 aa
AA seq
DB search
MSRPSSAGGAGGGLGAGKAGGGSKHGGSGAAGGGGAAAAAAAAAAAAAAAAAAAAAAAGV
SGSVSGSGSVTAATAVTLPTAAAAAAAAAAAALPGQSAELTALFECPVCFDYVLPPILQC
QAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLAMEKVASTLPFPCKYASAGCLLSLHHSEK
PEHEEVCEFRPYTCPCPGASCKWQGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPG
AVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRL
TWEATPRSIHDGVAAAIMNCDCLVFDTSIAHLFADNGNLGINVTISMC
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctcagcgggaggagcgggcggaggactgggagccggtaaggcggga
ggagggagtaaacacggcggctccggagcagcaggaggaggaggagcggcggcagctgcc
gctgctgcagccgctgcggccgcggcagcagcagcagcggcggcggctgctgcgggggtt
tcgggctccgtctctgggtccggttctgtgactgctgcgaccgctgtaacgttacctact
gcggctgctgctgctgccgccgctgctgctgctgctctacccggacagtcggccgagctg
acggcgctgttcgagtgcccagtgtgcttcgactacgtgctgccgccgatcctgcagtgc
caggccggccacctggtctgcaaccaatgtcgacagaagctgagctgctgcccgacctgc
cgcgggcctctcacacccagcatacggaacctggcgatggagaaagtcgcctccacgctg
cccttcccctgcaagtatgcctcagcgggttgcctgctgtcactgcaccacagcgagaaa
cccgaacacgaggaggtctgcgagttccgcccgtacacctgcccctgtccaggggcctcc
tgcaaatggcaaggctctctggaagcagtcatgcctcacctcatgcacgcccacaaatcc
atcacaacactgcagggcgaagacattgtcttcctggccacggacatcaatctgccagga
gctgtggactgggtgatgatgcagtcctgcttcgggcatcacttcatgctggtgttggag
aagcaggagaaatacgagggccaccagcagttcttcgcgatcgtgctgcttataggtact
cgcaagcaagccgagaactttgcctaccgcctcgagctgaacggcaatcgtcggcggctc
acatgggaagccacaccacggtcaatccacgacggagttgctgcagcgattatgaactgt
gactgtctcgtgtttgatacctccattgcccaccttttcgctgacaacggcaacctgggc
atcaacgttaccatctccatgtgctga
DBGET
integrated database retrieval system
