Astyanax mexicanus (Mexican tetra): 103031690
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Entry
103031690 CDS
T05042
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
103031690
NCBI-ProteinID:
XP_049339343
Ensembl:
ENSAMXG00000036569
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Position
9:43503444..43554153
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AA seq
1075 aa
AA seq
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MCWRSVSVLGLLLLLLLLPIHHAVSFPEDTVPLDTVDRHYSRQYPVFRGRPSGNESQHRL
DFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADRETCAMKGKHRDE
CHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVAL
FADGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGNHVYFFL
REIATEHNNLGKAVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFEVL
QSVTDIININGVPSVVGVFTTQLNSIPGSAVCAFSMPDIEKAFHGRFKEQKTADSVWTPF
PEEKLPKPRPGCCAGHGSAESYKSSIEFPDETLQFIKSHPLMDTAVPSIGDEPWFTKTRV
RYRLTALAVDNAAGPFKNYTVVFIGSEGGVVLKVLAKTTALSLNESILLEEIDVFNQAKC
LSSNEDDRRILSFHLDKDSHTLFVAFSSCVVRIPLSRCERHRTCHKSCIASRDPYCGWMP
HGACERIPAGVQSGFEQDVELGNTARLGDCHEFLTTASAPDFKSYGDPTSDLELPAPSVT
PSAASGHIESPQSAPSLPPTRFGSRKFVLRDDPDTSQSLPGVLEGVWEIQSGDSNQLVHM
NILITCVFGAFLLGALIAGMVVYCYRDAFLRKPRKIHKDAELAPSCTDSTGSFAKLNGLF
ESPVKEYPHPMDTPKLYSSLLNGGKEVPPSPDAKTMILSGQNPDLTALPTPESTPVLQQK
NLQPVKNQWERSQGKPGRKDCPPKSPQYLPSSSPTYPVLGNHQIPSAVVLPNATHEHRAS
SPDGPRPEKKVQNGEHHGSKSGRKEHRRSVDARNTLNDLLKHLNESNSNPNNTAKGIMVE
VPRSRQHLMLEPLGNVAEIPPKVPSREASLYSPSSSLPRNSPTKRVDVPSTPTSPTGQPG
GTLERQRYHRGSSQRHSISSPPKGLHSPNGMMMTRQPSFSRGRYVPPMPPSRLDSHGVPI
GMTPSLSRQSSYSGHGSLPRTSVKRTASLKPDVPPKPNGFVPQTAQMRVVNKYSY
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtgttggaggagtgtttccgttcttggcctgctgctgttgctgctgctgctcccaatt
caccatgctgtcagtttcccagaggacaccgtccccctggacaccgtggacagacactac
tcccggcagtatccagtgtttcggggacggccgtcaggaaatgaatcacagcaccggctg
gacttccagctgatgacaaagattcaggacacactcttcatcgccggcagggaccaagtc
tacttagtgagtctgagggaatcttacaggaacgagatcattccctacaggaaactaacg
tggaggtcgggccaggcggacagagagacgtgtgccatgaagggaaaacacagagacgag
tgccataactttattaaggttctggttcccagaaatgatgatctcgtgttcatctgcggc
accaacggcttcaaccccatgtgccgctactacaggctggataatctggagtttgatggc
gaggaaatcagtgggttggcgcgatgcccgtttgatgccaagcagaccaatgttgccctg
tttgctgacggtaagctgtactcggctacagtggcagacttccttgccagcgatgcagtg
atttaccgcagcatgggtgacggctcagcactcagaaccatcaaatacgactccaaatgg
ttaaaagaaccacatttcctgcatgcagtggattatgggaatcacgtttatttcttcctc
cgggaaatcgcaaccgaacacaacaacctgggcaaggcggtctactctagagtagctcgg
atttgcaagaacgatgtcggcggttctcagcgagttttggagaagcactggacgtcgttc
gttaaggcgaggctgaactgctctgttcccggagaatccttcttctacttcgaagtcctc
cagtctgtcaccgacatcatcaacatcaacggcgtgccgtccgtcgtgggagtgtttact
acacagctaaacagtatcccaggctcggcagtgtgtgccttctccatgccggacatcgag
aaagctttccacggacgctttaaggagcagaagactgcggattccgtctggacacctttc
cctgaggagaagctgcccaagccaaggccaggctgctgtgcgggtcacggatcagcagag
tcctacaaaagctccatcgagtttccggatgagacgctgcagttcattaagtctcatccg
ctgatggacaccgccgtgccttctataggagacgagccgtggttcaccaagaccagagtc
aggtacagactgaccgctctggcagtggataacgctgcaggcccctttaaaaattacaca
gtagtttttattggctcagaaggcggagtagtcctaaaggtcctggccaagacgaccgcg
ctgtcgctcaacgagagcatcctgctggaggagatcgacgtctttaaccaggccaagtgt
ttgtccagtaacgaggacgaccgtcgcattctgtcctttcacttagacaaagacagtcac
actctgttcgtggcgttctccagctgcgtggtgcgaatcccactgagccgctgcgagaga
caccgaacctgccacaagtcatgtattgcctccagagatccgtactgtggatggatgccc
cacggagcttgtgagaggattccagcaggcgtgcagtctggttttgagcaggacgttgaa
ttggggaacacagcgcgactcggcgactgtcatgagtttttgactactgcttcagcgcca
gatttcaaatcatatggcgacccaacctctgacttggagttaccagcaccgtcagtcacg
ccgtccgctgcttcaggccacatagaatcacctcaaagcgctccctctcttccacccaca
cgctttggctcacggaaattcgttctccgagacgacccagacacttcccaatcgttgccg
ggggtgctggagggtgtttgggagatccagtcaggtgactccaatcagttggtacacatg
aacatcctaatcacatgtgtatttggtgccttccttctgggagcgctcatcgccgggatg
gtcgtctactgctaccgcgatgccttcctgcgcaaaccgcgcaagatccacaaggatgca
gagttggcgccatcttgcacagactccacaggaagctttgccaagcttaacggcctcttt
gaaagcccggtaaaggagtacccacatccaatggacacacccaagctctattccagccta
ctcaatggagggaaagaggtcccaccatcccctgatgccaagaccatgatcctcagtggg
cagaatccggatttgacagctttacccactccagaatccacaccagtgcttcagcaaaag
aacctgcagccggtcaaaaaccagtgggaaaggtctcaagggaagcctgggcgcaaagac
tgtccgcccaagagcccacagtaccttccgtccagctctcctacatacccagtgctgggg
aaccatcaaatcccaagtgctgtggtgcttcccaacgccacacacgagcatcgggcatcc
agtccggatggtccgcggccagagaagaaggttcagaacggcgaacatcacggctctaaa
tcaggccgcaaagaacacagacgttcagtggatgctaggaacacactgaatgaccttctg
aagcacctgaatgagagcaacagcaaccccaacaacactgccaagggcatcatggtagag
gtaccacgttctcggcaacacttgatgcttgagcccttgggcaacgtagcagaaatcccg
cccaaggtcccgagtcgggaagcatctctctattcaccgtcctcttcactgcccaggaac
agcccgaccaagcgggtggatgtaccgtccacacccacctcacccacggggcaaccaggt
ggtacgctggagagacagcggtaccaccgaggatcttctcagcgccactcaatctcatca
cctccaaaaggattacactcgcccaacgggatgatgatgacccgccagcccagcttcagc
aggggcaggtacgtgccgccaatgccaccctcgagactggactcccacggggtgccaatt
ggcatgacgccctcgttgtctcggcagagcagctacagtgggcacggctctctgcctcgg
acaagcgtaaaacggacagcatcgctaaaaccggatgtgccgcccaaaccgaacggcttc
gtgccacagactgctcaaatgagggttgtgaacaaatacagctactga
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