Astyanax mexicanus (Mexican tetra): 103031729
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Entry
103031729 CDS
T05042
Symbol
relb
Name
(RefSeq) transcription factor RelB isoform X1
KO
K09253
transcription factor RelB
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103031729 (relb)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
103031729 (relb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103031729 (relb)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
103031729 (relb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
DUF6444
Motif
Other DBs
NCBI-GeneID:
103031729
NCBI-ProteinID:
XP_022529988
Ensembl:
ENSAMXG00000040998
LinkDB
All DBs
Position
18
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AA seq
583 aa
AA seq
DB search
MRNMNGPARNGTLGTGALDLDEINEFIVESGFKLPGPPPPPSLTPTEISNGPVLVSRCTD
SPQRPNLFPQVPSAGTRNMSSLPSSRGPKAQAQRRGTPVGRSARSHQTGTEQLERLLNKP
QLQVVEQPKERGMRFRYECEGRSAGSILGASSTEVNKTLPAIEIQGPIEGIKKVTVTVSL
VTKDIPYRPHPHCLVGKDCSDGICIISLNPHTTRRHSFVNLGIQCVRRKELDASLIKRRN
KNIDPFNTGQSKSIEDMDMNVVRLCFQCELELEDGDRIQLSPVVSNPIYDKKATTTAELK
INRLNIVRGPCSGKTEIYMLCDKVQKDDIEIIFHHDDWEAKAEFAQTDVHRQIAIVFKAP
PYQEQDISEEVEVNVCLRRISDRMHSDPVKFTYVPLDQDPYEVDRKRKIKSDIKFSEDCR
GTSAPDRIINKPATSHQIDTFNFIPFDCGIPLATPLQDFLGTSSQPSLGQGLEDLYADPF
GQEDSCVSLDPDAMGNLLVSISECIGQQNLFQLFNNADPGFDGSDPNLNIDMGQPQMNLS
SYSDMHFNQMVSDRNHGTDPESLPQDLIGISLGQVKTENEGDS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatgaacggaccagctcgcaacggtaccctaggcactggcgctctcgacctt
gatgaaataaacgagttcattgttgagagcggatttaaactccctggacctcctcctcct
ccttctcttactcctacagaaataagtaatgggccagtgctcgtctctagatgcacagac
tccccacagcgtcctaatttattcccacaagtcccttctgctggaaccagaaacatgtca
tctctaccgtcgtctcgtggacccaaggctcaagcacagcgacgtgggaccccagtggga
aggtctgcccgctcccatcagacgggcacagagcagctggagagactcctgaacaaaccc
cagctgcaggtggtagagcagcccaaagagcgtggcatgaggtttcgctacgagtgtgag
ggccgctctgccggcagcatcctgggagcctccagcactgaagtcaacaagaccctgcct
gccatcgagatccaggggccaatcgaggggattaaaaaggtgacagtgacggtgtctctg
gtgactaaggacatcccttaccgtccgcacccgcactgcttagttggaaaggattgttca
gatggaatctgtatcatttcgctaaatcctcacacaacccgacgccacagttttgtgaat
ttaggcatccagtgtgttcggaggaaggaattagatgcctcactgatcaagaggaggaat
aaaaatattgatccattcaacactggacagtcaaagagcattgaagacatggacatgaac
gtggtgagactgtgtttccagtgcgagctggaattggaggatggagacaggatccagctc
agtcctgtggtttccaacccaatctatgataagaaagctacaacgactgcagagctgaag
atcaacaggctgaatattgtcaggggtccttgttcaggaaagactgagatctacatgctg
tgcgacaaagtgcaaaaagatgacattgagatcatcttccatcatgacgactgggaggcc
aaggcggagtttgcccagacagacgtccaccgtcagatcgccattgtcttcaaggctccg
ccgtatcaggagcaggacatcagcgaggaagtggaggtcaacgtgtgtctgcgtcgcatt
tcggaccgcatgcacagcgatccggtcaaattcacctacgttccacttgaccaagatcca
tatgaagtagaccggaagaggaagattaaatcagatatcaagttcagcgaggactgccgt
ggcacgtcagctccagacaggattataaacaaaccagctacgtctcaccagattgacacg
ttcaattttatcccgtttgattgtggtatcccattagcaactcctctccaggacttctta
ggtacttccagccagccttcactgggtcaggggctggaagacctgtatgcagatcccttt
ggtcaagaggacagctgtgtgagtttggatccagacgccatgggaaacctcttggtcagc
atttccgagtgtattggtcaacagaatcttttccagctttttaacaacgcggatcctggg
tttgatggctcagatccgaacttgaacatagacatggggcagcctcagatgaatttaagt
tcctatagtgacatgcacttcaaccagatggtgagcgaccggaaccatggcacagatccc
gagtccctgcctcaagacttaatcggcatttccttaggtcaagtcaagacagaaaacgaa
ggagattcgtag
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