Astyanax mexicanus (Mexican tetra): 103031746
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Entry
103031746 CDS
T05042
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103031746
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
103031746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
BAG6
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
103031746
NCBI-ProteinID:
XP_022518505
Ensembl:
ENSAMXG00000030754
UniProt:
A0A3B1KF12
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All DBs
Position
1:46907641..46931631
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AA seq
560 aa
AA seq
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MDRLQNKMKFFLKLGYSHSDILRVLQSLQHDAPTNDILEELIKTCRTPTGTAQPGPERVT
SSQSSSPKLIPRGCSSPQTHIQMDTHSQRHTQLDTQTSSPFRSVVIDGSNVAISHGNKQV
FSCRGIELAVQWFWNKGIRDITVFVPLWRKEQSRPEAPITDQHILRQLENRNILVYTPSR
CVNGKRVVCYDDRYIVKLAYDSNGIIVSNDNYRDLQVEKPQWKKFIEERLLMYSFANDKF
MPPDDPLGRNGPTIENFLRKKPIGPETKQQHCPYGKKCTYGVKCKFYHPERSNQPLMSVA
DELRAKSQPGCETEDFPPSTHFTHTNCNATTALPSAAYQDELTRALSGLDLYSGPCDRPP
YLQKSMLNAKSSESRLYLSDSALQTSMAFSSGYMSSNGFVSGSDGDCFSSGGALMEQRRA
HSPDLYKRAHHPGLHTLSNCQHAHSDLGLNYAHTPHSLHRYQPRSSCNNTATPHFNEPLP
FHNALLRQASHPRPAEVSWGHGHGEVSNFEATDRRKDVRSQLSTIFPQSTVDQVMSLYPH
TLDTTELVTLIQKYRNSHLL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcctgcaaaacaagatgaagtttttcctgaagctgggctactcccactcagac
atcctgagggtcctgcagagccttcagcatgatgccccaaccaacgacatcctagaggag
ctcatcaagacctgccggacccccacaggcacagcacagcctgggccagagagagtgacc
agcagccagagcagcagcccaaagctcatcccacgaggttgcagctcccctcagacacac
atccagatggacacacacagccagcgacacacacaacttgacacacagacctccagccct
ttcaggtctgtggttatcgatgggagcaatgtggctataagccacgggaacaagcaggtg
ttttcctgccgggggatcgagctcgccgtccagtggttctggaacaaggggattcgtgac
atcaccgtattcgtgcctctgtggaggaaagaacagtcgagaccagaggctcccatcaca
gatcagcacatcctcaggcagctggagaacaggaacatcctggtgtacacgccgtctcgc
tgcgtaaatggtaaacgggtcgtgtgctacgacgatcgctacatcgtcaagctggcctac
gactcgaatggcatcatcgtgtctaatgacaactaccgtgacctgcaggtggagaagccc
cagtggaagaagttcattgaggagcggctgctgatgtactcttttgctaacgacaagttt
atgccacctgatgatccactaggaaggaacggaccaacaattgaaaacttcctcaggaag
aagcccataggaccagagaccaagcagcaacattgtccttatgggaagaagtgcacatat
ggtgtaaaatgcaaattttaccacccagagcgctccaaccagcctctgatgtctgtagca
gatgagctcagagcgaagagtcagccaggttgtgaaacagaggacttccctccctctaca
cacttcacacacacaaactgcaacgcaaccacagcgcttccttcagcagcttaccaggac
gagctaactcgagccctgtctggacttgacctctacagcggcccatgtgatagacccccc
tacctgcagaagtcaatgctgaatgccaaaagctcagagtcccgcctctatctcagtgac
tccgccctccagacatcgatggccttcagcagcggatacatgtcgagtaacgggttcgtg
tccggcagcgacggcgattgcttctcatctggtggtgctttaatggaacaaagacgtgca
cacagccctgatctatacaaacgagcgcatcacccaggcctgcacacactttcaaactgc
caacacgctcactcagatttaggcttaaactacgctcacactccgcattcactgcacaga
taccagccccgcagctcctgcaacaacacagcaaccccgcatttcaacgaacccttacct
ttccataacgcactgctcaggcaagcttcccaccccaggccggcagaggtcagctggggt
cacgggcacggcgaggtcagcaatttcgaggctacggacagaaggaaagacgtgaggtct
cagctcagtaccatcttccctcagagtacagtggaccaggttatgagcctgtatccacac
acactggacacaactgaactggtcacactgatccagaaatacaggaatagccacttactg
taa
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