KEGG   Astyanax mexicanus (Mexican tetra): 103031920
Entry
103031920         CDS       T05042                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03030  DNA replication
amex03410  Base excision repair
amex03420  Nucleotide excision repair
amex03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103031920 (rfc3)
   03410 Base excision repair
    103031920 (rfc3)
   03420 Nucleotide excision repair
    103031920 (rfc3)
   03430 Mismatch repair
    103031920 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amex03032]
    103031920 (rfc3)
   03036 Chromosome and associated proteins [BR:amex03036]
    103031920 (rfc3)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103031920 (rfc3)
DNA replication proteins [BR:amex03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103031920 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103031920 (rfc3)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103031920 (rfc3)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103031920 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103031920 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 DUF2247 ABC_tran
Other DBs
NCBI-GeneID: 103031920
NCBI-ProteinID: XP_022537196
Ensembl: ENSAMXG00000007956
UniProt: W5KKR4
LinkDB
Position
20:complement(38790859..38798254)
AA seq 356 aa
MSLWVDKYRPTSLAKLDYHKDQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSIVAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCL
AVRVPLPSIEEVCSVLAGVCRKEGLLLPAELAKHIAEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEIIMKGLVSELL
SNCDGHLKAEVAQMAAYYEHRLQMGNKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtctgtgggtggataaatacagaccgacctctctggcgaagctggattatcacaaa
gatcaagcgaaccagctgaagaacctggtacaatgtggagacttccctcacctgcttgtt
tacggtccgtctggcgctggcaagaagactagaattatgtgcctccttcgtgagctgtac
ggagctggggtggaaaaacttcgcatcgaacaccagtccattgtagctccatctaaaaag
aaaattgaaataaatacaattgccagcaactaccatttggaggtgaatcccagtgatgcg
gggaacagtgaccgtgtcgttatccaggagctgattaaaacagtggcgcagtctcagcag
atccagtcaagcacgcagagagagttcaaagttgtgctgttgactgaggtggaccgtctc
accaaagatgcgcagcacgccctgcgccgcaccatggagaagtacatgtccacctgccgt
ttgattttatgctgcaattccacctctaaagtgatctcccccatcaggagcaggtgtttg
gctgtgagggttcctctgcccagcatagaggaggtgtgcagtgttctggcaggagtttgc
aggaaggaagggttgcttctgcctgcggagttggctaaacacattgcggagaagtctggt
cgcaaccttcgcaaagctctgctgatgtgtgaggcctgtcgagtgcaacagtaccccttt
tctgctgatcaagacatccctgaaacagactgggaagtgtatctcagagagacagcaaat
gccattgttagccagcaaagcccacaaaggcttttggaagttcgggcaagactctatgaa
ctcctaacccactgcatcccaccagaaatcatcatgaagggcctggtgtctgagctgctg
agcaactgtgatggacatctgaaggcagaggtcgctcagatggctgcttactatgagcac
agactgcaaatgggcaacaaagctatttatcacctggaggcctttgtggcaaagttcatg
gccatctacaagaagtttatggaggatgggctggacaacttcatgttctaa

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