Astyanax mexicanus (Mexican tetra): 103031920
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Entry
103031920 CDS
T05042
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03030
DNA replication
amex03410
Base excision repair
amex03420
Nucleotide excision repair
amex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103031920 (rfc3)
03410 Base excision repair
103031920 (rfc3)
03420 Nucleotide excision repair
103031920 (rfc3)
03430 Mismatch repair
103031920 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103031920 (rfc3)
03036 Chromosome and associated proteins [BR:
amex03036
]
103031920 (rfc3)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103031920 (rfc3)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103031920 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
103031920 (rfc3)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103031920 (rfc3)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103031920 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
103031920 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
DUF2247
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103031920
NCBI-ProteinID:
XP_022537196
Ensembl:
ENSAMXG00000007956
UniProt:
W5KKR4
LinkDB
All DBs
Position
20:complement(38790859..38798254)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKDQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSIVAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCL
AVRVPLPSIEEVCSVLAGVCRKEGLLLPAELAKHIAEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEIIMKGLVSELL
SNCDGHLKAEVAQMAAYYEHRLQMGNKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtgggtggataaatacagaccgacctctctggcgaagctggattatcacaaa
gatcaagcgaaccagctgaagaacctggtacaatgtggagacttccctcacctgcttgtt
tacggtccgtctggcgctggcaagaagactagaattatgtgcctccttcgtgagctgtac
ggagctggggtggaaaaacttcgcatcgaacaccagtccattgtagctccatctaaaaag
aaaattgaaataaatacaattgccagcaactaccatttggaggtgaatcccagtgatgcg
gggaacagtgaccgtgtcgttatccaggagctgattaaaacagtggcgcagtctcagcag
atccagtcaagcacgcagagagagttcaaagttgtgctgttgactgaggtggaccgtctc
accaaagatgcgcagcacgccctgcgccgcaccatggagaagtacatgtccacctgccgt
ttgattttatgctgcaattccacctctaaagtgatctcccccatcaggagcaggtgtttg
gctgtgagggttcctctgcccagcatagaggaggtgtgcagtgttctggcaggagtttgc
aggaaggaagggttgcttctgcctgcggagttggctaaacacattgcggagaagtctggt
cgcaaccttcgcaaagctctgctgatgtgtgaggcctgtcgagtgcaacagtaccccttt
tctgctgatcaagacatccctgaaacagactgggaagtgtatctcagagagacagcaaat
gccattgttagccagcaaagcccacaaaggcttttggaagttcgggcaagactctatgaa
ctcctaacccactgcatcccaccagaaatcatcatgaagggcctggtgtctgagctgctg
agcaactgtgatggacatctgaaggcagaggtcgctcagatggctgcttactatgagcac
agactgcaaatgggcaacaaagctatttatcacctggaggcctttgtggcaaagttcatg
gccatctacaagaagtttatggaggatgggctggacaacttcatgttctaa
DBGET
integrated database retrieval system