Astyanax mexicanus (Mexican tetra): 103032281
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Entry
103032281 CDS
T05042
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103032281 (chd2)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103032281 (chd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
103032281
NCBI-ProteinID:
XP_007254529
Ensembl:
ENSAMXG00000007404
UniProt:
A0A8T2LM89
LinkDB
All DBs
Position
9:complement(27917014..27964420)
Genome browser
AA seq
1824 aa
AA seq
DB search
MMKNKNKKQADEGSTHSNASSNSASEESNHSGSDSASQSESEQGSTRTPAQHSESNSSSE
SESRSESECESAGSKTQQAEPESKDKPVKKKESLAEVKKMWEEHPDVYGVRRSNRSRTEP
ARLNIGAEGSSDSEGESPKRKAPQQKKKQNTWKDDDTNDEDDDDEEEASSSESEQEEKKV
RSRRLPARRPQTKSSAAKQNQSQKGRKTKKQETSEEEDDDDDDDDEDTPKRQTRRRAATK
VSYKEDQNDFETDSDDLIEMAEGAEEAQDDDSETIEKVMDTRTGKKGATGAATTLYAVEE
KGDPGADFDLEKDEGETQFLIKWKGWSYIHNTWESIDSLTQQKVKGMKKLENFKKKNDEL
NAWLRRASPEDLEYYNCQQELTTDLNKQFQIVERVIATKTGKSQVPSDFPSHKTTSNEPE
YLCKWMGLPYAECTWEDGALISKKFQSCVDSFNNRNSSKTVPSKECKVLKQRPRFVALKK
QPSYIGGENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQL
YGPFLLVVPLSTLTSWQREFCTWAPDMNVVVYLGDVLSRKTIRDYEWIHQQSKRIKFNAL
LTTYEILLKDKSVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNS
LKELWSLLHFLMPDKFESWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAK
VEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKQPE
DGDGETPLERLQILVRGSGKLVLLDKLLTRLKERGNRVLVFSQMVRMLDILADYLTIKRY
PFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQ
NDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLD
NGSGNSNSNPFNKEELTAILKFGAEELFKEPEGEESEPQEMDIDEILRLAETRESDQGSS
ATDELLSQFKVANFTMDENTPELEGKTVRDWDDIIPEDQRRRVEEEEKQKEMEDIYMLPR
SRSSNKKLQANDSDSDVGSKLKLKNRSSGSDSETDDSDDDKKPKRRGRPRARKNNVEGFT
DAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNTCVTAIQEHEEQM
KENPTEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPPNPAERNKFQLTCRL
KVPHFDVDWDIHDDTQLLLGIYEHGYGNWDLLKTDADLKLSEKILLDDPNKKPQAKQLQM
RADYLLKMLKKDLENKDSSKAGEETKVRKRKPRVKKENKAPKDELANEMASPRLSDIPSE
EGEVKDEGAEKSPTKKKQKKKDNKENKEKQGAQKKDKEGDKDKKRAKPKKEKAKPAAKGK
KAQGPVHITAGSEPIPISEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQ
HTRACLLKIGDRITECLKSYSDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRS
QEEEKEHKKKDDPPRKKPFRPEPSGSSRDSTGTQPSSKSHPPTGPSSHSHHRESYNQSNK
RHFPNDDRGEWQRDRKYNYPGNSNQSWQGDRHHQYDRYKDHHYGDRRPHGDSYRNPGGYR
NSGSPRKRPYDQYGDRDHRGHRDYYDRHSDPKRRRSDEYRSPNYHQGGGGGGGGGGGGGG
GGGGGGGGSYSQDFRRMPDHRGVPGNHGQAGPDHYRPFHSDKPPPLIDPRSPQSQKSPLE
SLSPLERTAEQKPAAEGNWNNRKT
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaacaagaacaaaaaacaagcagacgagggctcgacccacagcaatgcctcc
agcaattcagcatcagaggagtcaaaccactccggctctgactcggccagccagtcggag
agtgaacagggcagcacgaggacgcccgcccagcactccgagtccaacagctcttctgag
tccgagagccgctccgagtctgaatgtgaatctgccggctccaagacccagcaggctgaa
ccagagagcaaagacaaaccagtcaagaagaaggaaagcctggcagaggtaaagaagatg
tgggaggagcatccagatgtctatggtgttagacggtccaatcggagtcggacagaacct
gctcgtctaaacattggagcagagggtagcagtgattctgagggtgagagtcctaaaaga
aaagcaccacaacagaaaaagaagcaaaatacctggaaagatgatgacacaaacgacgag
gatgatgatgatgaggaagaggccagcagttcagagagtgagcaggaagaaaaaaaagtt
agatccagacgacttcctgctagaagacctcagaccaaatcctccgcagccaagcagaat
cagtctcaaaaaggacggaaaacaaagaagcaggaaacttcggaagaggaggacgatgat
gacgacgatgatgacgaggatactccaaagagacagacgcgcagaagggcagctactaaa
gttagttataaggaggaccagaatgattttgaaactgattctgatgacctgattgaaatg
gctgagggagcagaagaagcgcaagatgatgacagtgagaccattgagaaagtcatggac
accagaactggcaaaaaaggagctactggggctgctaccaccctctatgctgtggaggag
aaaggtgaccctggggcagattttgacctggagaaggacgagggcgagacccagttcctt
atcaagtggaaaggctggtcctacatccacaacacatgggagagcatcgattctctcact
caacagaaggttaaagggatgaagaagctggagaactttaagaagaagaatgatgagctt
aatgcttggttaagaagagcatcaccggaggatttggagtattataactgccagcaagag
ctaaccactgatctaaacaagcagtttcagatagtggagagagtcattgcaacgaaaact
gggaaatcacaggtgccttctgattttccctctcataagaccacttctaatgaaccagag
tatttgtgtaagtggatgggcctcccctatgcagagtgcacatgggaggacggtgcctta
ataagtaaaaagttccagtcctgcgtagatagcttcaacaacaggaacagctcgaaaact
gtcccctccaaagaatgtaaggtgttgaaacagaggcctaggtttgtggcactgaaaaag
cagccttcctacatcgggggcgagaatctggagctgagagactatcagttagatggcgtg
aactggctagcccactcatggtgcaggtgcaacagtgttatcttggcagatgagatgggc
ctgggaaagaccatccagaccatttctttcctctcttacctgttccatcagcaccagctc
tacggtcccttcctattggtggttcctctctccacgctgacatcctggcagcgggagttc
tgcacctgggcccctgatatgaatgttgtggtgtatttgggggatgtcttaagcagaaag
acgattcgtgactatgagtggatccaccagcagtctaaaagaatcaagtttaatgcgctt
ttgactacatatgagattttattaaaagataagagtgttttgggaaacataaactgggcc
tttcttggggtggatgaagctcaccgactaaagaatgacgactcgctgctatataaaaca
ctgatcgattttaggtccaatcataggctgctaatcactgggaccccactgcagaactct
ctcaaagagctgtggtcccttctgcactttctaatgcctgacaagtttgagtcctgggag
gattttgaggacgagcacggtaaaggaagggataatggctaccagagtcttcacaaagtg
ctggagcccttcctgctgcggcgtgtcaaaaaagatgtggagaaatctctgcccgccaaa
gtggagcagatcctcagagtggacatgtccgcccagcagaagcagttctacaagtggatt
ctcacgaggaattataaagccctctccaaaggcacacgaggcagttcctctggatttctg
aacattgtgatggagctgaagaagtgttgtaaccatggtttcctcatcaagcagccggag
gacggagacggcgagacccctctggagcgactgcagattctcgtcaggggcagtgggaag
ttggtcctcctggataagctgctgactcggctgaaggaacgggggaacagggttctggtc
ttttctcagatggtccgaatgttggacatcttggctgactatctgaccattaaacgctat
cctttccagcgcttggacggttccatcaaaggagagatcaggaaacaagcactcgaccac
tttaatgctgagggctctgaggacttctgtttcctcctgtccactcgtgccggaggcctg
ggcatcaatctagcctcagccgacaccgtggtcatcttcgactcagactggaaccctcag
aatgatctgcaggcccaggccagagcccacaggataggccaaaagaaacaagtgaatatt
tatcgtctggtcaccaaagggactgtagaggaagaaattattgaaagggcaaagaagaag
atggttctagaccatctggtcattcagagaatggacaccactggacgaacagtactggat
aacggttcaggcaattcaaactcaaacccttttaacaaagaagaactgaccgccatctta
aagtttggagcagaagagctgtttaaagagcctgaaggggaagaatcagagcctcaggaa
atggacattgatgagattttgcggctggctgagaccagggagagtgatcaaggttccagt
gcaacagacgagctcctgtcccagtttaaggtggccaatttcactatggatgagaacaca
ccagagcttgaggggaaaactgtaagggactgggacgacatcattccagaggatcagcgg
cgacgggtggaggaagaggagaagcagaaggagatggaggacatctacatgctgcccagg
agcaggagctccaataaaaaactgcaggccaacgacagcgacagtgacgtggggtctaag
ctcaaactcaagaatcgctcctcaggctcagacagtgaaactgacgacagcgacgatgac
aagaagccgaagcggagaggacgaccacgtgcacgcaagaacaacgtggagggattcacc
gacgcagaaatccgcaggttcataaaggcctataagaaatttggagccccacttgagagg
ttggaggctattgcacgagactctgagctggtggacaaatccatagcagacctaaagaga
ctgggagagctggtccacaacacctgtgtaactgcaatacaggaacatgaggaacaaatg
aaggagaatcccactgaagctaagggtccagggaaaagaagaggcatcaacattaagatc
tctggcgttcaggttaatgccaagtcaatcattcagcacgaagaagagtttgaacctctt
cacaaagccgtacctccaaatccggccgagaggaacaagtttcagctgacctgtcgtctg
aaagtccctcattttgatgtggactgggacatccacgatgatacacagctgttgctgggc
atctatgagcatggatatgggaactgggacttgctcaagactgatgctgatcttaagctg
tctgaaaagattcttttagatgaccctaacaagaagccacaggcaaaacagctgcagatg
agagcggactacctgttaaagatgctgaagaaggatctggagaataaggattcttccaaa
gctggagaggagaccaaagtcaggaagaggaaacccagagtaaagaaggagaacaaggcc
ccgaaagacgagctagccaatgaaatggcctctccccgtctctccgacatcccctctgaa
gaaggtgaagtgaaggatgagggagctgaaaaatcccccactaagaagaaacagaagaag
aaggacaacaaagagaacaaagagaagcaaggagctcagaagaaagacaaggagggtgac
aaggacaaaaagcgtgccaaacctaagaaagagaaggccaaaccagcagccaaagggaaa
aaggcccagggcccagtgcatattacagcgggcagtgagcccatcccgattagtgaagag
gatgatgagctggaccaggaaaccttcagcatttgtaaggagaggatgaggccggtgaag
aaggctctgaagcagctggataagccagatgaaggcctttcagtgcaggaacagctgcag
cacacccgagcctgcctgctcaagatcggagaccgcatcactgagtgccttaaatcctac
agtgacccagagcatgtcaagacgtggcgcagaaatctctggatctttgtgtccaaattc
actgagtttggagccagaaagctgcacaagctgtataaaatggcccagaagaagcgatcc
caggaggaggagaaagagcataagaaaaaagatgaccctcccaggaaaaagcctttccgg
cctgaaccgtctggatccagtcgagactccaccgggacccagccttcatccaagtcccac
ccacctaccggaccctcgtctcactcccaccatcgcgagtcctacaaccagtccaataag
agacacttccccaacgatgatcggggggagtggcagagagaccgtaaatacaactacccg
ggaaacagcaaccagtcctggcagggcgaccggcatcaccagtatgatagatacaaggac
catcattatggagaccgccggccacatggggactcgtaccgcaatcctggaggctaccgg
aacagcggctcgccgcgaaaacggccctacgaccagtatggtgaccgagaccatcggggt
catcgtgactattatgacagacattcagaccctaagaggaggcgctccgatgagtaccga
tcaccaaactaccaccagggtggtggaggaggtggaggaggaggaggaggaggaggagga
ggaggaggtggaggaggaggaggaagctactctcaggacttcaggaggatgcctgatcac
aggggcgtcccagggaaccacggccaggcggggcctgaccattatcggccgtttcattca
gacaagccccctcctctcatagaccctcgctccccacagtcccagaaatcccccctagag
tccctgtcgccccttgagaggaccgccgagcagaaacctgcggccgaaggcaactggaac
aacaggaagacatga
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integrated database retrieval system
