Astyanax mexicanus (Mexican tetra): 103032378
Help
Entry
103032378 CDS
T05042
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103032378 (cstf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103032378 (cstf1)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103032378 (cstf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_WDR11_1st
KNTC1_N
Beta-prop_SPT8
PROPPIN
Frtz
Motif
Other DBs
NCBI-GeneID:
103032378
NCBI-ProteinID:
XP_022538192
Ensembl:
ENSAMXG00000038064
UniProt:
A0A3B1IHX0
LinkDB
All DBs
Position
24:32788743..32797008
Genome browser
AA seq
431 aa
AA seq
DB search
MYRPKPTLKDRQHLYKLIISQLLYDGYTNIANSLINEVKPQNVVSPSEQLMQLAKIGMEN
DDSAVQYAIGRSDTVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSWNPLDQHTDTISGVNYNPTANSYVTCSKDGSIKLWDGVSNRCVTTF
EKAHDGAEVCSAVFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQTHRTQGV
FNHTEDYILLPDERTVSLCCWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRTTTD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcccaaagccgacactgaaagaccgacagcacctgtataaactgatcatcagt
cagctgctgtatgatggatacaccaacatcgccaacagcctgataaacgaagtgaaaccc
cagaatgtggtttctccatcagagcagctcatgcagctcgccaagatcgggatggagaat
gatgacagcgctgtgcagtacgctattggccgctcggacacggtggctccgggggtgggg
attgatctggagtttgatgcggatgttcagacaatgtctccggaagcctcggagtacgag
acctgttacgtgacgtctcataaagggccgtgccgcgtggccacgtacagccgcgacggg
cagctcatcgccaccggctccgccgacgcctccattaaaatcctggatacagaacggatg
ctggccaagagtgccatgcctctggaggtaatgatgaacgagacggcgcagcagaacatg
gagaaccaccctgtgatcaggaccctctatgatcatgtggatgaagttacctgcctggcc
ttccaccccacagagcagatcctggcctcaggatcccgagattacaccctcaaactcttc
gactattccaaaccttcagccaaaagagctttcaaacacatacaggaagcggagatgctg
cgctccatctccttccacccgtctggagacttcctgctggtggggactcagcacccgacg
ctgcgtctgtacgacgtcaacaccttccagtgcttcgtatcctggaacccgctggaccag
cacacagacaccatcagcggcgtcaactacaaccccaccgccaacagctacgtcacctgc
agcaaggacggcagcatcaagctgtgggacggcgtctccaaccgctgcgtcaccaccttc
gagaaagctcacgacggagccgaggtctgctccgccgtcttctccaaaaactccaaatac
atcctgtccagcgggaaggactccgtagccaagctgtgggagatctccaccggacgcacg
ctcgtcaaatacacaggcgcgggtctgagtgggcgtcagacgcaccgtactcagggcgtg
tttaatcacacggaggattatatcctgctgccggacgagcgcaccgtcagcctgtgctgc
tgggactctcgcacggccgagcgcaagaacctgctgagcctcggacacaacaacatcgtc
cgctgcatcgtccactcacccaccaaccccggcttcatgacctgcagcgacgacttcaga
gccagattctggtaccgacgaaccaccaccgactga
DBGET
integrated database retrieval system
