Astyanax mexicanus (Mexican tetra): 103032416
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Entry
103032416 CDS
T05042
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103032416 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103032416 (nup98)
03036 Chromosome and associated proteins [BR:
amex03036
]
103032416 (nup98)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103032416 (nup98)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103032416 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
103032416
NCBI-ProteinID:
XP_007259635
Ensembl:
ENSAMXG00000019286
UniProt:
A0A8B9KKM0
LinkDB
All DBs
Position
17:complement(13477267..13494143)
Genome browser
AA seq
1804 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNTGFGTTGGFGSSAFGTANNTGGLFGTPQNKPGG
LFGSSTFSQPVTSSTSSGFGFGATSGTSNSLFGSTNTGGGGLFSQQGNAFSANKPTSFGT
FGNSTASTGGGLFGTTNTPSNPFGGTSGSLFGASSFTATQPGTAIKFNPPTGSDTMVKSG
VTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPIAANTSSLFGASAAAPSTA
TGLFGSSTTSTAFNFGQNKTTFGTGTTGFGATTAPLFSQPQQQNNSLFKPFGQATTAQNT
GFFGNTNTMGQPNTSSMGLFGNTAPSQAGGLFGNTANTSTATGFGTGASLFGQNSAAFGN
TLFGNKPPGFGTTTTSAPSFGTPSTLFGNKPPLTLGANTNTSNFGFGANPAGANMFGNKT
TGALGTGLGTGFGAGVGTAQPSLFGNTQNKIGSTLGPVGTFGATGFNTGTSALNFGAPQQ
PVALTDPNAAAAQQAVMQQQINALAYAPFGDSPLFRNPLSDPKKKEERLKPTNPAAQKAL
TTPTHYKLTPRPASRVRPKALTSSGSAKSQLFDGLDDDEPSVTNGAFMPRKSIKKLVLKN
LNGSSLYSSPLNREADDLNSPSEYPQNGLSLRTDKEEIQDGETERGVEDDLEVSKFYTNP
IAKPIPHSQPSPLLQDTITELNMRRGVNARNGLDLSSEEISLGEDSVQEERDEELEAQKP
PHPAGIVLSRVGYYTIPSMEELGKMLNENGECIVENFTVGRKGYGSVFFPGEVNLTNMNL
DEIVHFRRKEVIIYPDDKEKPPEGEGLNRRAEVTLDGVWPNDKTTCTQIKTPERLTEMNY
EGRLENASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEEVPPARTDPKKLKTAI
HPGLQQIPPTQQQMAPQAQSTALLELLSRVSELDSDMADITQDQAPDGVLCEEDEGALDE
DAKMALRLETPAEHEPVSASSQIASTLGINPHTLQIMKASLFAGDDEYDPFHEQLPQKIL
EEVASPRVLLGKSQGGLSVGNLLQTKFSSGGGLFAHLPEIPFGGIPQKLSKPAAPEAPWP
SLGPSFLLPPPAPEATLRTVGARRLEGPVAQESSVTQGKGRLLMDAALYMGRSFRVGWGP
NWTLVHCGESISTAQESKEHAVDTMGFGFLPKPSKTRQITESPFKVHVEQVVGMEPKATA
ESLALHHRPLEIGLKHSTISTEDACPFIKPEKGVNALHEYAKWIVEANKGTGDAVLGQWQ
QVWTLCAAIWGRLGDEEAEIEYSGDYQEHLARRRSFSHWLSESASQRILEEVGSRGHSHV
EAIFSYLTGHCISEACKLAQKSGDHRLSLLLSQAVGSQLSRDLLALQLADWNRMQTDSFI
QEERLRIFALLAGKPVWESTDHCVNVCSELDWKRCVAVHLWYMLPPTASIADALTKYEAA
FQGQEEVSKYACAPFPPYVDDLELLGLDEEMEDTETKKPLYDICFHLLKLYSDKYYSLQQ
LLDPSTVTAEQLDYRLSWHLWNVLQALNYTHLSLSRQGLLHASYAAQLESGGLWEMAVFV
LLHIPDSALRERAVREMLNQHCTLEETEESAEKERFLTDKLLIPMKWIHQAKAIRACRDG
DKHREALHLYKAGHWNHCHRLVIKYLASDCIINDNHDYLMEFLEGLAVPERCAQIQDWDT
SGRVYLDYIRVIQTLKAIQQMESPGYELERLHTEVTSLCSRIELLPCSKAKDRLAQSEMA
KRLANILRVVLSLQQGGEGTPDPRHIPLCHLAPHIGRLPMPEDYALEELRSLTQSYLREY
IVSN
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggtgctcccttcgggggaggaacaggaggatttgggacatca
tccacgtttggacaacaaaacactgggtttggaacaacaggtggctttggttcctcagct
tttgggaccgcaaataacacaggaggtctctttgggacaccacagaacaaacctggtgga
ctttttgggtccagcaccttcagtcagcctgtcacctcctcaactagcagtgggtttggt
tttggagccaccagtggcacctccaacagcctttttggaagcaccaacacaggaggtgga
ggactcttctcccagcagggcaatgcatttagtgccaataaacctacctcttttggcact
tttggcaacagtactgccagtaccggcggcgggctgtttgggacaaccaacaccccctcc
aatccatttggaggaacctcaggatccttatttggggcttcaagcttcactgccacccag
cctggcacagccatcaaatttaatccaccaactggaagtgacacaatggtaaagagtggt
gtgacgaccagcattaataccaaacaccagtgcatcacagccatgaaggagtatgaaaac
aaatctctagaggagctgaggttggaagactaccaggcgggcagaaaggggccctccaac
ccaatagctgccaacacatccagcctatttggagcttctgcagcggctcccagcactgct
actgggctctttggttcctcaaccaccagtactgccttcaattttggccagaataagacc
acatttggaactggtacaactggctttggtgcaaccacagcccctttatttagccaacca
caacaacagaataacagtctctttaagcctttcggtcaggctaccactgcccaaaacact
ggcttcttcggcaacaccaacaccatgggtcagcccaacaccagcagcatgggcctgttt
gggaacactgctccatctcaggctggagggctgtttgggaacacagcaaacaccagtacg
gccactggctttggcacaggcgcaagtctctttggccagaacagcgcagcatttggaaat
accttgtttggtaataaacctcctggttttggcaccaccacaaccagtgcaccctccttt
ggtacaccttctactttgtttggcaacaagcccccccttactctgggagccaacacaaat
acttccaactttgggtttggtgccaatcctgctggagcaaatatgtttggaaacaaaacc
actggtgccctagggacaggtctaggaacaggttttggagcaggtgtaggcacagcgcaa
ccgtctctgtttggaaatacccagaacaaaatcggctcaactttgggcccggttgggacg
tttggagccactggattcaatacaggaaccagcgctttgaactttggagcaccacaacag
cctgttgctctgactgaccccaatgctgccgcagcccagcaagcagtgatgcaacaacag
atcaatgccctggcttatgcaccttttggagactcgcctcttttcagaaaccctctctct
gaccccaagaagaaagaggagcgtttaaagccaacaaatccagctgcccaaaaagctctg
acaaccccaacacactacaagctgaccccccgtcctgcctcacgtgtgcgtcccaaggcc
ctcacctcctcagggtctgccaaatctcagctctttgatggactggatgatgatgaacct
tctgtaaccaatggagcttttatgccaagaaagagcataaagaagcttgtgctgaagaac
ctgaatggcagcagtttatacagcagcccgctgaacagagaagctgatgacttgaactct
ccttcagagtacccacagaacggcctcagtttgagaaccgataaagaggaaattcaagat
ggtgagaccgagaggggagtggaggatgatctggaagtgtccaaattttacaccaacccc
attgcaaagcccatcccacactctcagcccagccccttactgcaggacaccattactgag
ctgaacatgagaagaggtgtcaatgcccgcaatggactggatctaagcagtgaggaaatc
tccttaggtgaggattctgttcaggaggagcgagatgaggagctggaggcccagaaacca
cctcacccagccggtatagtgctcagtcgtgtaggctattacaccattccatccatggaa
gagctcggaaagatgctgaatgaaaatggagaatgtattgtggagaacttcactgtaggc
aggaaaggttatggatctgtgtttttccctggtgaggtaaatctgaccaacatgaatctg
gatgaaattgtacactttagacgcaaggaggtaataatctaccctgatgacaaagaaaaa
cctcctgagggagaaggccttaacaggcgtgcagaggtgaccctggatggtgtgtggccc
aatgacaaaaccacttgcacacagatcaagactcctgagcgtctgaccgagatgaactac
gaggggcgactggagaatgcgtctcgtaaacagggtgctcgtttcctagagtaccggcct
gaaactggctcctgggtgtttgaggtggcccacttctccaagtatggcctgcaggattct
gacgaggacgaagaggttccaccagccaggaccgacccaaaaaagctgaagaccgctatt
catcctgggctgcagcagattccacctacccagcagcagatggcgccacaggctcagagt
acggcactgttggagcttctcagccgtgtgtcggagctggacagtgacatggcagacatt
acccaggaccaagcacctgatggggttttgtgtgaggaggatgagggtgctctggatgag
gatgcaaagatggcactaagattggaaacccctgctgaacatgagcctgtctctgcctcc
agccagattgcctctacactggggatcaatcctcacacccttcagataatgaaggcgtct
ctgtttgcgggggatgatgagtatgaccccttccatgagcagctccctcagaaaatcttg
gaggaggttgcatctccacgtgttttacttggaaaatcccaaggtggtctgtcagtgggg
aatcttttacagactaagttctcatcaggtggggggctctttgcccatctgccagagatt
cctttcggagggattcctcagaagctcagtaaaccagcagcaccggaagccccatggccc
tcattgggcccctctttcctcttgccacctccagctccagaggccaccctgcggactgtg
ggggctcgcaggttggagggacctgtagctcaggagagctcggtcactcagggaaaagga
cggctgctgatggatgcagcattgtacatgggccggtctttcagggtaggctggggccct
aactggacactggtgcactgtggagaatcgatcagcacagcgcaggagtcaaaggagcat
gctgtagacaccatgggatttggctttctgcccaaacctagcaagaccagacagatcaca
gagagcccctttaaagtgcatgtggagcaggtggtgggcatggagccaaaggcaacagca
gagagcttagctctgcaccaccggccgctggagattggacttaagcacagcactatcagc
actgaggatgcatgccccttcatcaagcctgaaaaaggagtgaatgcattgcatgagtat
gctaagtggattgtcgaggccaacaagggaacaggagatgctgtcctgggtcagtggcag
caagtgtggaccctgtgtgcagctatttggggcaggctgggagatgaggaagcggagatt
gagtatagtggggactaccaggagcatctagcacgccgacgtagcttctctcactggctg
tctgagagtgcctcccagcgaattctggaagaagtgggaagtaggggacacagccatgtg
gaggctatcttcagctatctgactggccactgcataagtgaggcctgcaaactggctcag
aaaagcggagaccatcgtctgtcgcttctactctcccaagcagtaggctcccagttaagc
agagaccttttggctctacaactagctgattggaacagaatgcagactgactcgtttatt
caggaagagagacttcgaatatttgccttactagcaggcaaacctgtatgggagtcaaca
gatcattgtgtaaatgtgtgttctgagctggactggaagcgctgtgtggctgtgcacctg
tggtacatgctccctcctacagcatctatagcggatgctctcaccaaatatgaggctgcg
tttcagggccaagaggaggtgagcaagtatgcttgtgcacctttccctccttatgtggat
gacctagagctgcttggactagatgaagagatggaggacaccgaaactaagaaacccctc
tatgacatctgcttccacctgcttaaactctacagcgacaagtactacagtctacagcag
ctgctggaccctagcacagtgacagcggaacagctggattacagactgagttggcacctg
tggaatgtgctacaggctctaaactacacccacctttcactttcacgtcagggcctcctg
catgccagctatgctgcccagctcgagagcgggggcctctgggagatggcggtctttgtt
ttgctacacatccctgactctgcgctaagagaacgtgctgtgagggaaatgttaaaccag
cactgtacgctggaggagactgaggagtctgctgagaaggagcgtttccttacggacaag
ctgctgatccccatgaagtggattcaccaagcaaaagccattcgcgcctgcagggatgga
gataaacacagagaagctctgcacctctacaaggctggccactggaatcactgccaccgg
ctagtcataaagtatctggcctcagattgcatcattaatgataaccatgattacctgatg
gagtttctggaaggcttggctgtgcctgagcgctgtgctcagatccaggactgggacacc
tcaggccgggtgtacctggactacatccgcgttattcagacactcaaggcaattcagcag
atggagagccctggatacgagctggagcggctacacacagaggtaacatctctgtgcagt
agaattgaacttctcccctgctccaaagccaaagataggcttgcccagtcagaaatggcc
aaacgtttggccaacatcctgcgtgtggtgctaagcctgcagcagggtggagagggcact
ccagacccacgtcacatccctctgtgtcatctggctccccacattggacgtctgcccatg
cctgaagactatgctctggaagaacttcgcagcctcacccagtcttaccttcgggagtac
attgttagtaactga
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integrated database retrieval system
