Astyanax mexicanus (Mexican tetra): 103032441
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Entry
103032441 CDS
T05042
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103032441 (tmc6b)
03037 Cilium and associated proteins [BR:
amex03037
]
103032441 (tmc6b)
Transporters [BR:
amex02000
]
Other transporters
Pores ion channels [TC:
1
]
103032441 (tmc6b)
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103032441 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
RE_SinI
Motif
Other DBs
NCBI-GeneID:
103032441
NCBI-ProteinID:
XP_049321406
Ensembl:
ENSAMXG00000020529
LinkDB
All DBs
Position
16:30430412..30474335
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AA seq
822 aa
AA seq
DB search
MAARSVSFDADAHFMETGVESPLDEDRVHDSFTQLIHEQSRDLSHTETMEMNSFDLEEET
RDDFPSLSCADSCAGVPEEAELTDPLVETCWSTATLRVLSSMPSRTIGRSRGAILSQYYN
RTMQMCRRRQSRPSIRSFSRSARPSICGYRVETDAANFDREENKRERLVNNLQNLSENDR
VRMLRAIPLSLHEKRELRLSALRKPGRSFSRNEIPCCSQLKYYIIIAFRHSWYSWLSFLS
SLQLWQTALKRVSGRFGTGVLSYFVFLRTLLFFNVFLLLVLCLFLVVPQAVRPPSLSASP
HLYGLELLTGAGYFADSVMYYGYYSNYTLTKACNGARNQTSCGFHLSYNMPLAYFFTIGA
AFFITCIILVYSMSKSFGQSFRIDRSKGLLAMKVFCSWDFKVTKKSSVRLQRENISIQLK
ELVAEVNRKEVKSSLLQRLSAFSIQLLAWTICVGSTAGCAYAIYCFSEHMHKDLQIRVRS
SSNTKESLLLKEASLLALPVAVSSINLLLPGFFNTVAWMEEYDSPSKRNYVAIFRNLMLK
VSLLGVLCYHWLGRVALEPKSVGLECWESFVGQELYRFLLMDFIFTSLDTFFGEFLWRLF
SQRVLKKERKPVFDIARNVLELIYGQTIAWLGLLFTPLLPVVQVIKLLFLFYMKKTSLMR
NCQAPRKPWRASQMTTFFITLLCFPSFLGAAVCVTYTMWTIKPSASCGPFQGLNTMFQAG
KKWVEQLAKDNPRLTWLTWAHTYLVENPFFLFLAAGIFLIVIYFHSQVVDGQRKIIELLQ
EQIENEGEDKKFLITRLQTIHEQKRPFSPRRVRGASQESSFS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgtagcgtgagttttgacgcagatgcccacttcatggagacgggagtggag
agccccctggacgaagatcgagttcatgactccttcactcagctgattcatgagcagagc
cgagacctgagccatacagagaccatggagatgaactcctttgatctagaggaggagact
agagatgatttcccatctctgagttgtgcagacagttgtgcaggtgttcctgaggaagca
gagttgactgatccgctggtggagacatgctggtctacagccactctccgagtgctctcc
tccatgccgagccgaaccattggacgcagccgtggagcgatcctttcacagtattataac
cgaaccatgcagatgtgcagacgcagacagagccgaccctccatacgatccttctcccgt
tcggcccggcccagcatctgcggctaccgcgtggagacagacgctgccaacttcgaccgg
gaggagaataagcgggagcgtctggtgaataacctgcagaacctgtctgaaaatgatcgt
gtccgcatgttaagagccataccgctaagcctgcacgagaagagggaactgaggctgtca
gcgctgagaaaacctggccgctccttctcccgcaacgagatcccctgctgcagccagctg
aaatattacatcatcatcgctttcagacacagctggtacagctggctctccttcctctcc
tccctccagttgtggcagacggctctgaagagagtgagcggccgcttcgggactggcgtc
ctctcatacttcgtcttcctcaggaccctcctcttcttcaacgttttcctgctcctggtg
ctgtgcctgtttctggtggtcccccaggccgtgcggcccccctcgctgtccgcctcacct
cacctctatggccttgagctgctcaccggggcgggctattttgcagactctgtgatgtac
tatggctactacagtaactacaccctcacaaaggcctgcaatggtgccaggaaccagact
tcctgtggctttcatctgtcctataatatgcctttggcctacttctttaccattggagca
gccttcttcattacctgcattatccttgtctacagcatgtctaagtcgtttgggcaaagc
ttccgtattgaccggtccaaaggcctgttagccatgaaagtcttctgctcctgggacttt
aaggtcaccaagaaatcatcagtcagactacagcgtgagaacatctccatccaactcaaa
gagttggtggcggaggttaaccgaaaggaggtgaagtcttccttgttgcagcgattatca
gctttttccattcaattactggcctggacgatatgtgtcggtagcactgcaggatgtgcc
tatgccatctactgcttctcagaacacatgcacaaggatctgcagatccgtgttcgctcc
tcctcaaacactaaagaaagtctcctgctgaaggaggcgagcctgctggcgctcccggtt
gccgtgtcttccattaacctgctccttcctggcttttttaacaccgtggcctggatggag
gagtatgattctcccagcaaacggaactacgtcgccatcttcaggaacctcatgctaaaa
gtgagtctgctcggagtgctgtgctatcattggttggggcgggttgctttggaaccaaag
agtgtgggcctggagtgctgggagagttttgtgggacaagaattgtatcgattcctgctg
atggacttcatcttcacgtcattggataccttttttggggagttcctgtggaggttgttt
tcacagcgggtactaaagaaggagagaaagcctgtgttcgatattgcacggaacgttctt
gaactcatctatggacagacgatagcttggttgggattgctgtttactccgctcctgcct
gtagtgcaggtcattaagctgctgtttcttttctacatgaaaaagacgagtctgatgaga
aattgtcaggctcccaggaagccgtggagggcgagccagatgaccaccttcttcatcacc
ctcctctgcttcccctctttcctgggagcagcagtgtgtgtaacctacaccatgtggacg
ataaagccatctgcgagctgcggacccttccagggccttaacaccatgttccaggcaggg
aagaaatgggtggaacagctggccaaggacaaccctcgactgacctggctcacctgggct
catacgtacctggtggagaaccctttctttctcttcctcgctgctggcatcttcctaatt
gtgatctacttccacagccaggtggtagatggacagaggaagattatcgagttgcttcag
gagcagattgaaaacgagggggaagataagaagtttttgatcactagactacagaccatc
cacgaacagaaacgcccattttctcctcgccgcgtcaggggagccagtcaggaatctagc
ttctcatga
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