Astyanax mexicanus (Mexican tetra): 103032561
Help
Entry
103032561 CDS
T05042
Symbol
ercc3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
amex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103032561 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
103032561 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103032561 (ercc3)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103032561 (ercc3)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103032561 (ercc3)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103032561 (ercc3)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103032561 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
103032561
NCBI-ProteinID:
XP_022529178
Ensembl:
ENSAMXG00000036947
UniProt:
A0A3B1JE20
LinkDB
All DBs
Position
5:complement(37863904..37894995)
Genome browser
AA seq
781 aa
AA seq
DB search
MGKKERGDRERKSKKRYHEEDEDEEEAMGSESQEAIPAAAGKQVDESSTKLDEYGAKDYR
SQMLLKNDHGSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPNHVHEYKLTAYS
LYAAVSVGLQTSDIVEYLQKLSKTSVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESAFP
DVIQRLLQDVVIRDCRLRTAEGEETELITEVISSKPAISKSLQDGSGASTSQPAEGQRTG
AQVPEDIFSYYEQMDKEEEEEEETQTVSFEIRQEMIEELQKRCIQLEYPLLAEYDFRNDT
VNPDINMDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRC
LVLGNSSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSW
EAERVMEWMRSQEWGLIILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLN
FLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKF
RACQFLIRYHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPK
INTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFYS
LVSQDTQEMAYSTKRQRFLVDQGYSFKVITKMAGMEEEDLMFNTREEQQQLLQKVLAASD
LDAEEEVVMGEMGGKPQFSRRPGTMSSMSGADDTVYMEYHTRGNKGAANKSVHPLFKRFR
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggagaggggagatcgggagaggaagtctaagaaacggtatcatgaggag
gatgaggatgaggaagaagccatggggagcgagtcacaggaggccattcctgcagcagcc
ggcaagcaagtggatgaatccagcactaaactggatgaatatggggctaaggactaccgc
tcacagatgttattgaagaatgaccatggttctcgacctctgtgggtggctcctgatggt
catatcttcctggaggctttctcaccagtctataagtacgctcaggactttctggtggcc
atagccgagccagtgtgcagacccaaccatgtgcatgaatacaaactgaccgcctattca
ctctacgctgctgtaagtgttggcctgcagacatcagacatcgtggagtatctccagaag
ctcagtaaaacctcagtgccagatggcatcattcagtttataaagttgtgtactgtgagc
tatgggaaagtcaagctggtactgaagcacaacaggtattttgtggagagtgcttttcca
gatgtgatccagaggctgctgcaggatgttgtgattcgagactgccgtctgcgcactgct
gagggggaggagactgagctcatcactgaggttatctccagcaagcctgcaatttcgaaa
tctctgcaggatggcagcggagcgtccacgtcccagccggcagagggtcagcgcactggt
gcacaggtccctgaggacatcttcagctactacgaacagatggacaaggaagaggaggaa
gaagaggagacccagactgtatcttttgagattcgacaggagatgattgaagaactacaa
aagcgctgtatccagcttgaatatcctctgttggcggaatatgatttccgcaatgacaca
gtcaaccctgatattaacatggacctgaagcccacagccgttctcagaccttatcaggag
aagagcctccgcaagatgttcggcaatggtcgagctcgctctggagtcatcgttctgccc
tgcggtgctgggaagtctttagtgggagtgactgcagcctgcacggtgcggaagcgctgc
ctggtactgggaaactcatctgtgtcggtggagcagtggaaagcccagtttaagatgtgg
tccaccattgatgactctcagatctgccgctttacgtcagatgctaaagacaagcccatt
ggctgctctgtggccatcagcacctactctatgctgggtcacaccaccaagcgctcctgg
gaggctgagagagtcatggagtggatgcgcagccaggaatgggggcttatcatcctcgat
gaggtccacactattccagcaaagatgttccggcgtgttctgaccatagtccaggcccac
tgtaagctgggtctgaccgctacactggtgcgagaggacgacaagattgtagatctcaac
ttcctgattggtcccaaactgtacgaagccaactggatggagcttcaaaacaacggctac
atcgcaaaagtgcagtgcgctgaggtgtggtgtccgatgtcgcctgagttttatcgtgag
tacgtggctataaaaactaagaagcggatcctgctgtacaccatgaaccccaacaagttc
cgagcctgccagttcctcatccgctatcacgagagacgcaacgacaagatcatcgtcttc
gccgacaacgtcttcgcactcaaagaatacgccatccgtctcaacaaaccatacatctat
ggccccacatctcaaggggagaggatgcagatcctccagaatttcaagcacaaccccaag
atcaacaccatctttatctccaaggtgggagacacgtcattcgacttgcctgaggcgaac
gttttaattcagatctcgtctcatggaggatctcgccgtcaggaggcccagaggttgggc
agagtgttacgtgccaagaaaggaatggttgctgaagagtacaatgcctacttctattcg
ctagtatctcaggacacacaggagatggcctattctaccaagagacagcgtttcctggtt
gaccagggatacagtttcaaggtgatcactaagatggcaggaatggaagaggaggatctg
atgtttaacacacgtgaggagcagcagcagctcctgcagaaggttctggcagcatctgat
ctggatgcagaggaagaggtagtgatgggagagatgggaggaaaacctcagttttctcgc
cggcccggtaccatgagctccatgtcaggcgctgatgacaccgtctatatggagtaccat
actcgtggcaacaaaggagcagccaacaagagcgtccaccctctgttcaagcgcttccgc
aagtga
DBGET
integrated database retrieval system
