Astyanax mexicanus (Mexican tetra): 103032690
Help
Entry
103032690 CDS
T05042
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex02010
ABC transporters
amex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103032690 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103032690 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103032690 (cftr)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
103032690 (cftr)
Transporters [BR:
amex02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
103032690 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
AAA_29
SMC_N
DUF87
AAA_16
FtsK_SpoIIIE
RsgA_GTPase
MMR_HSR1
T2SSE
AAA_23
AAA_24
Dynamin_N
MeaB
nSTAND1
NTPase_1
ATP-synt_ab
AAA_30
bPH_3
Motif
Other DBs
NCBI-GeneID:
103032690
NCBI-ProteinID:
XP_007256023
Ensembl:
ENSAMXG00000000420
UniProt:
A0A8B9JNT5
LinkDB
All DBs
Position
9:24824272..24852720
Genome browser
AA seq
1486 aa
AA seq
DB search
MNKSPVDEASFLSRYFFWWTNPIMRKGFREKLRPTDVYQTASQDTADVLAERLEKEWDRE
VISAKKKPSLLRALSRCFIRPFLFFGVLLYLGEATKSVQPQLLGRIIASFDPFHEPEREQ
GYFLAFGLGLLFIARFLLLQPAMFGLHHVGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSANLGKFDQSLGMAHYVWISPLQCILCVGLIWELIDINSLCALAAISLLGVIQAC
LSHKMGPYKAKRILLTNKRLALTSEIMENLHSVKAYGWEDIMETIIKNIRQDEVKLTRKI
GSLRYFYSAAYFFSAIWVITAAVVPQALTTGITVRRVFTTLSYCMVLRMTVTRQLPASIQ
MWYDTIRLIWKIEDFLSKEEYKMLAYDLSITDMTLENVTASWDEGIGELFEKIKQENKGN
GYQNGDGLFFTNLYVTPVLRNISLHLHKGEMLAVAGSTGSGKSSLLMTILGELVPSSGKI
CHSGRVSFSSQTAWTLPGTIRDNILFGLTYDEFRYTSVVKACQLEEDLATLPENDRTLLA
EGGINLSGGQKARVALARAVYRDADTYLLDAPFTHLDIATEKEIFDKCVCRLMASKTRIL
VTNKIEHLKRANKILLLHNGESFFYGTFSELQSQRPDFSSLLLGLEAYDNVNAERRCSIL
TETLRRISVDESSGIRPDRSSYRQVAPPAYKDERKSSVIISPLMADRKSSFTPTGLEEEV
RRPLSDRRISLVPENELVDDCFMGNDTYHNHGVHLAGQRRQSVLAFMTNAQGQGRRDQLQ
SSFRRRLSIVPQSELASEVDIYARRLSKDSMYDITGDLDEENIEACLADEQIENVFETTK
WNTYVRYVTSNKSLIYVLIFILAIYAVEVAGSVAGIFLITDEVWKEENQMFALNTTNTEK
ANVSLASSQYAVIVRPTSSYYIIYIYVATSESILALGFFRGLPLVHTMITISKKLHQKML
SSVLRAPMSILNTMKTGSIMNRFTKDMAIIDDMLPLLMFDLVQLTLVVIGCILVVSIMRP
YIFLAATPLALIFIVMRKYFLRTGQQLKQMETEARSPIFSHLIISLKGLWTIRAFDRQAY
FETLFHKALNTHTAVWFLYLSTLRWFLFRADIIYVFFFTLAAWIAVGTNQDKPGEIGIIV
ALAMLILGTFQWCVVTSIAVDGMMRSVERVFKFIDLPSEEPKPKLGQRNVSDLVIENPDT
SNEAAWPSHGQMDVQNLTVKYTESGHAVLKNLSFAVEGGQKVGILGRTGSGKSTLLSALL
RLAYTDGEMSIDGVSFNSMPLQKWRKAFGVVPQKVFIFTGSFRMNLDPYGCHSDEELWSV
VEEVGLKSVIEQFPDKLDFQLEYGGHVLSYGHKQLMCLARSILSRARILLLDEPSAHLDP
LTVKVLKKTLRQSFSTCTILMCEHKVEPLLECQCFLMMEQGKVKTYDSIQRLLNETSQLK
QAMSPAERLKLFPRRNSSMHVAQPKLSSVTLTLQEEAEDDIQDTRL
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcacctgtggatgaggccagtttcctctccagatacttcttctggtggaca
aaccctattatgcgaaagggtttcagggagaaactgaggccaacagatgtgtatcaaacg
gcatcacaagacacagctgatgtacttgcagaacggcttgagaaggaatgggacagagaa
gttatctccgcgaagaagaagcccagtctcctccgagcactttcccgatgctttattcgg
ccctttctgttctttggagttctcctctatttgggggaagccacaaaatctgtacagcct
cagctcctgggacgaataattgcttcattcgaccccttccacgagccagaacgagagcag
ggctacttcctggccttcggcctgggccttctctttattgctcgcttcctactactgcag
ccagccatgtttgggctgcaccacgtgggcatgcagatccgcatcgccctctttagctta
atctacaaaaagacgctgaagctgtccagtcgagttttggacaagatcagcacaggacag
ctagtcagcttgatgtcagctaacctgggcaagtttgatcagagtctgggcatggcccac
tacgtctggatttctcctttgcagtgtatactgtgtgtgggactaatctgggagcttatt
gatattaacagcctctgtgccctcgctgccatctccttactgggagtcattcaggcctgt
ctgtcccataaaatgggcccctacaaagcaaaaaggatactgctgaccaacaagcgtcta
gctctgacctcggagatcatggagaatctacactcagtgaaagcctatggctgggaggac
atcatggagaccatcatcaagaacatcagacaagatgaggtcaagctgaccaggaagatt
ggctctctgcgctacttttacagtgctgcctacttcttctctgccatctgggtgatcact
gcagcagtggtgccccaagccctcaccaccggcatcactgtgcggcgcgtcttcaccacg
ctgtcttactgcatggtgctgcgcatgactgtcacccgccagctgcctgcctctatccag
atgtggtatgataccattcggctcatctggaaaattgaggactttctcagcaaagaagaa
tacaaaatgttggcgtatgacctcagcatcacagacatgactctagaaaacgtcacagct
tcctgggatgagggaataggggaactatttgagaagattaaacaggagaataaaggaaat
ggttatcagaatggagacgggctcttcttcaccaacctctacgtaacacctgttcttagg
aatatcagcttgcacttacacaaaggtgaaatgttggctgtggctggctccacaggatct
ggaaagagctctctgttaatgacaatcttgggtgagctggtcccctcctctggaaaaatc
tgccacagtggccgggtctccttctcctctcagactgcctggacgttgcctggcaccatt
cgagacaacatcctgtttggtctgacctatgacgaattccgctataccagtgtggtcaaa
gcatgtcagctagaggaggacctggctactcttcctgagaatgacagaacacttttggca
gagggtggaataaacctcagtggcggtcagaaggcacgggtggccctggcaagggcagtg
tacagagatgctgatacctacctgctggatgcacctttcactcatctggatatcgcaaca
gagaaagaaatatttgacaagtgtgtgtgcagactcatggcctccaagacacggatattg
gtcaccaacaaaatcgagcacctgaaacgggccaacaagattctgctgctccacaacggc
gagtctttcttctacggcaccttctcagagctgcagtcccagcgccctgacttcagctcc
ctgctgctcggcctggaggcctatgacaacgtcaatgcagagcgtcgctgctccatcctt
actgagacccttcgcagaatctctgtggatgagagttcagggattcgccccgatcgttct
tcttacagacaggtggctccaccagcctacaaagatgaacgtaaatcatctgtgatcatc
agtccgcttatggctgaccgcaagtcttccttcacccctactggactcgaggaggaagtg
aggcgtccactgtccgaccgcagaatctctctagtgcctgagaatgagctggtggatgac
tgcttcatggggaacgatacataccataatcacggcgtgcacctggcaggccagaggaga
cagtcagtcctagcctttatgacaaatgcacagggccagggtagacgggatcagctccag
tcttccttccgccgccgcctgtccatagtgccccagagcgaacttgcctcggaggtggac
atctacgcccgccgactgtccaaggacagcatgtatgatattactggagacttggatgag
gagaacattgaggcgtgccttgcagacgaacaaattgaaaacgtctttgaaaccacaaaa
tggaacacatatgtccgatatgtgacatccaacaaaagtctaatttatgttctaatcttt
attctcgccatctatgctgtagaggtggcaggatctgttgctgggatttttttgataacc
gatgaggtctggaaagaagagaatcagatgttcgccctgaacaccacaaacactgaaaaa
gccaacgtatccctggcaagctcacagtatgctgtcatcgttcgccccaccagcagctac
tatatcatctacatctatgtggccacttcagagagcatattagctctgggctttttcaga
gggcttcccctggtccacaccatgatcaccatctccaagaaactgcaccagaaaatgttg
agttctgtgctgagggcacctatgtccattttgaacaccatgaagacaggttctatcatg
aacagattcacaaaagacatggccatcatagatgacatgttgcctctgctaatgttcgac
cttgtccagctgaccctggtggtgattggatgcattctggtggtgtccatcatgcggccc
tacatatttcttgcagctacacccttggccctcatctttattgtgatgaggaagtacttc
ttgcgaacggggcagcagctgaaacaaatggagacagaagcccggagtcccatcttttct
catctcatcatttccctgaagggcctgtggacgatccgggcgttcgaccggcaggcgtat
tttgaaaccctgttccacaaagccctgaatactcacacagcggtctggttcctctacctc
tccaccttgcgctggttcctattccgtgctgacatcatctacgtcttcttcttcaccctt
gctgcctggattgctgttggaaccaaccaggataaaccaggggagattggtatcatagta
gccctggcaatgctcattctgggtacctttcagtggtgtgtcgtcaccagcattgcagtg
gatggaatgatgcggtctgtggagcgtgtcttcaagttcatcgacttgccgtccgaggag
cccaaaccaaagctaggccaaagaaacgtctcagacctggtcatcgagaacccagacact
tccaacgaggctgcctggcccagccacggtcagatggacgtgcagaatttgacggtcaaa
tacacagagtctgggcacgccgtgctcaagaacctctccttcgccgtggagggtggacag
aaggtgggaatactgggcagaacaggttctgggaagagcactctgcttagcgcactcctg
cgactggcctacacagatggagaaatgtccatcgatggcgtgtcctttaacagcatgccc
ctgcagaagtggcgcaaggcttttggtgtggtgcctcagaaagtttttatcttcactggt
tcgttccgtatgaacttggacccctatggttgccacagtgacgaggagttgtggagcgtt
gttgaggaggtgggccttaagtcagtaattgagcagtttcctgataagttagactttcag
ctggagtatgggggccacgtgctgagctatggacacaagcagctgatgtgtctggcccgg
tctatcctcagcagggctcgtatcctgctgcttgatgaacccagtgcccatctcgaccca
ctgacagtgaaggtactgaagaagacgctgaggcagtccttctccacctgcaccatctta
atgtgtgaacacaaggtggaaccactgctcgagtgccagtgtttcctgatgatggagcag
ggtaaagtgaagacctacgactcgatccagagactcctgaatgagaccagccagctgaag
caggccatgagtccagctgagcgcctcaaactcttcccccggcgcaactccagcatgcat
gtagctcagcccaaactcagctccgtcacactcaccctgcaggaggaagcagaggacgac
atccaggacactcgcctctga
DBGET
integrated database retrieval system
