Astyanax mexicanus (Mexican tetra): 103032772
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Entry
103032772 CDS
T05042
Symbol
si:dkey-219c3.2
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103032772 (si:dkey-219c3.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103032772 (si:dkey-219c3.2)
03036 Chromosome and associated proteins [BR:
amex03036
]
103032772 (si:dkey-219c3.2)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103032772 (si:dkey-219c3.2)
Coactivators
SAGA/TFTC/STAGA complex
103032772 (si:dkey-219c3.2)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103032772 (si:dkey-219c3.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
SAGA-Tad1
DUF406
Motif
Other DBs
NCBI-GeneID:
103032772
NCBI-ProteinID:
XP_007252918
Ensembl:
ENSAMXG00000001498
LinkDB
All DBs
Position
10:complement(36096426..36151669)
Genome browser
AA seq
1028 aa
AA seq
DB search
MAGVPDPLEDMLYSDVDEKAVSDLVGSLESQLGAPDGSAAPQGDGRRSGPPQAQNLNLGQ
SQPATADRRRLGLQRAEPKLEVGGARENGSEGIPASVNPAQSTVLVGASPAAGRLQSHGK
AKPAAGLLTSANCSSDAAVVVPSASSSTTSSSSPTDNTLPHTNHISASTIRTAVPSRVLP
SESGSSGTVTVNSPAAAVSAAPTAGGAGGVLSTGVAGVVAVPGSGLGSENGNMSAPNGTN
GPLVSVQPDHVLSQPTDQSVSQAAPAVVLHRPPLVVPNGSDPKVAVQGALPVQGVGIGAA
AAVSAPAPAVVFSNANATLVKASPQSQIRTVVPSQLAGSPVGLNPSPPAPAVSMQAGTVG
VGVGPQLPVASTPSVLVKPEGGLVGQPTGMIRPATAAPMVATAAVPQRPGVPVAPRAVAP
QLTVRPQQQTTIQLPPGFTIPQGMVLVRTEAGQLVLVPQQVLAQAKAQNQNKPALSPRPA
TPTTAATFRVTTPVVQSPVTSPAIRPIPPAQAKVVQAAGPTSPAIQKSPVVTVSSAQKPA
GPTVITAGARVQTPPQPLIKPVVPSSPAPAAGTTGLSPEMQENVKKCKNFLATLIKLASH
NSPSPETSRNVKALVQDLLDAKIEPEEFTNRLQTELKSSPQPYLIPFLKKSLPALRMTLL
NSQQSLTQLSQPTPSTPVTVGTIKAPPPPPRSIVTPVPPVCPVVTQGQTAIKRAGVQATP
ARMPVVVTQSIRPQGPMVRGPAVQVRGPVGIAMQASANQKQKLNDPGGGTFKDDDDINDV
ASMAGVNLNEENARILATGSELVGTQIRSCKDETFLQANLLHKRMLEIARTFGVNEIGGD
VVSLVSHAAEVRLRSMLENVTALAQHRADSCKDEETLEQTSDVRTQLKFFEQLERLEKQR
KDDEEREILLKVAKSRSRQEDPEQARLKQKAKEMQQQELAEMRQRDANLTALAAIGPRKK
RKLDGGASASGEVSGGSLSAAASSSSSSSSSRQVRQRITRVNLRDLIFCLEQERSTARSL
LLYKALLK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgtccccgatccgctggaagacatgctttactcagacgtagatgagaaagcc
gtcagcgacctcgtaggctccttagaatcgcagctcggtgcaccggacgggtccgcagct
ccgcagggcgacgggagacgctccgggccgccgcaagcacaaaatctcaacttgggacag
tcgcagcccgctacggcggaccggcggcgcttgggactccagagagccgagccgaagctg
gaggtcggcggggctcgggaaaacggctccgaggggatcccggcctccgttaacccggcg
cagagcaccgtgctggtgggcgcttctccggccgcgggtcgcttgcagtcccacgggaag
gcaaagcctgcagcgggacttctaacttcagcgaactgttcaagtgacgcagcagttgta
gtaccatcagcatcatcatcaacaacatcatcatcttcacctacagataatactctccct
cacacaaatcacatctcagcgtctaccatacggactgctgttccctccagagtcctgcct
agtgagagtggaagcagtgggacagtgactgttaactcccctgctgctgctgtttctgct
gctcccactgctggaggagctggaggagttctgagtactggtgttgctggtgttgttgct
gttcctggctctggtttgggcagcgagaacggcaacatgtctgcaccaaatggcacaaac
ggtcctttggtttctgttcagcctgatcatgtgttgtcacaacctacagaccagtcagtt
agccaggcagcccctgctgtagtactgcatagacctccacttgttgtgcccaatggaagt
gaccctaaagttgcagttcagggtgcattgcctgtacagggggttggaattggtgctgct
gctgctgtctcagctccagctccagctgtggtgttttcaaacgcgaatgcaactttagtg
aaggccagcccacaatcccagattagaactgttgtccccagtcagctggccggtagccct
gtaggtctgaatccctctccaccagcacctgctgtcagcatgcaggctggcacagtgggt
gtgggtgtgggcccccagcttccagtggcaagcactccctcagttctggtgaagccggaa
ggcggccttgtgggtcagcccacaggcatgataaggcctgccactgctgctccaatggtg
gccactgcagcagtgcctcagaggcccggggtccctgtggctccaagggccgtggcgccc
cagctcactgtcagaccccaacagcagaccactatccagttgcctccaggattcaccatt
ccacaggggatggttctggttcggactgaagctggccagctggtgctggttcctcagcag
gttttggctcaggccaaagctcagaatcagaataaacctgcgctctctcccaggccagcg
acaccaaccacagcagccacttttagggtcactactcctgtggtccagtcacctgtgacc
tctcctgccatccgccccattcctccagcccaggcgaaggtggtacaggcagcagggccc
accagtcctgctatacagaagagtccagtggtgacggtcagttctgctcagaaacctgcc
ggccccacggtcattacagctggagctcgtgtgcagacccctcctcagcctctcattaaa
cctgtggttccgtcatcccctgctccagcagcaggaaccactggcctctctccggaaatg
caagagaatgtgaagaagtgcaagaacttcctggcgacgctgatcaaactggcatcccat
aattccccatctccagaaacgtctcgaaacgtgaaggcacttgtacaggacctgctggat
gccaaaatcgagccagaggaatttacaaatcgcctgcagacagagttgaagtcgtctcct
cagccctacctcattcctttcctgaagaaaagccttcctgctctgaggatgaccctgctg
aactcacagcagtctctgacccagctgtctcagcccacgccctccactccagtcactgtg
ggcaccattaaagccccacctcctcctcctcgctctatcgtcaccccagtaccccccgtg
tgccccgtcgtcacgcaaggccagactgctattaagagggcaggggtacaggctactcca
gctaggatgccagtcgtcgtcacccagtcaatacggcctcaaggtccaatggtcagagga
ccagcggtacaagtgagaggtcctgtcggcatcgctatgcaggcgtcagccaatcagaaa
cagaagctgaatgatccgggaggtggaacattcaaggatgatgatgacatcaacgatgtg
gcatcgatggcaggtgtcaacctgaatgaggagaacgctcgtattttagccacaggctcc
gagctggtgggcacacagatccgttcctgcaaagacgagacctttcttcaggccaacttg
ctgcacaagcgcatgcttgagatcgcacggacgtttggggtgaacgagatcgggggagac
gtggtgagcctggtgtcccatgctgccgaggtgcggctccgcagcatgctggagaacgta
acggctctggcacaacaccgcgcggactcctgcaaggatgaagagactttggagcagacg
tcggatgtgaggacgcagctgaagtttttcgagcagttggagaggctggagaaacagcgc
aaagacgacgaggagagagagatcctgctcaaagtcgccaaaagtcgttccagacaagaa
gaccctgagcaggctcggttaaagcagaaagctaaagagatgcagcagcaggagctggcc
gagatgaggcagcgtgatgccaacctcacagccctggccgcgatagggccacgcaaaaaa
cgcaaactggatggtggggcctctgcttctggagaggtgtctggaggctctttgagcgct
gcagcctcttcctcgtcgtcctcctcctcctctcggcaggtccggcagcggatcacgcgg
gttaacctcagggacttgatcttctgcctggagcaggagcgctccacggcccgctcgctg
ctgctctacaaagctctgctcaaatag
DBGET
integrated database retrieval system
