Astyanax mexicanus (Mexican tetra): 103032811
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Entry
103032811 CDS
T05042
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
amex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103032811 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
103032811 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103032811 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103032811 (gtf2h2)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103032811 (gtf2h2)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103032811 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
103032811
NCBI-ProteinID:
XP_007237310
Ensembl:
ENSAMXG00000004923
UniProt:
A0A8B9RGZ2
A0A3B1KFS6
LinkDB
All DBs
Position
22:complement(7328645..7339745)
Genome browser
AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEDILFQAKRKRVFESHGQVRLGMMRH
LYVVIDSSRTMEDQDLKPNRLTSTLKLMEFFVEEYFDQNPISQIGIITTKNKRAEKLTDL
AGNPKKHVAALKKAVGSTCLGEPSLYNALNIAMQTLKHMPGHTSREILIIFSSLTTCDPA
NIYELIKTLKELKIRVSVIGLSAEVRVCTILTRETGGSYNVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHIIASVSDQDAKPSFSMSHLESVDEGPGLTLGGYYCPQCRAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLDAFQESPLEEHTGDRFCQACQGELKDKSVFT
CPACSSVFCTECDLFIHDTLHCCPACIHTQGAS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagcctgagagagctaagcgatgggaaggaggctacgagagaacatgggag
gtgctgaaggaggacgagtctggttccctcaaagccactgtagaggacattctcttccag
gccaaaaggaaaagggtgttcgaaagtcatggacaggttcggctggggatgatgcgtcac
ctgtatgtggtgattgactcatcgcggacgatggaggaccaagacctgaagccaaataga
ctcacatctaccctgaagctgatggagttttttgtggaagaatattttgaccagaacccg
atcagtcagataggaatcatcaccaccaagaataagagagcggagaaactgactgatctg
gcaggaaaccctaagaagcacgtagctgcccttaaaaaagcagtcggctccacgtgtttg
ggggagccctccctgtacaacgctctcaacatcgccatgcagacgcttaaacacatgccg
ggacacaccagcagagagattctgatcatcttcagcagtctgaccacctgtgatcctgct
aacatctatgaactcatcaagacgctaaaagagctgaaaatccgagtgtcagtgatcggg
ctttctgcagaggtgcgggtgtgtaccattctcaccagagaaacaggaggaagctacaat
gtgattctggacgagagccattttaaggagctgttgatgttacacgtgaagccgcctccc
gccagctcctcctccgagtgctccctcattcgcatgggcttccctcagcacatcattgcc
tctgtgtctgatcaggacgcaaagccgtctttcagcatgtcgcacttagaaagtgtggat
gaaggtcctggactgacgctcggcggctactactgccctcagtgcagagccaagtacaca
gagctgcctgtcgagtgtaaagtgtgtggtttgacactagtctccgcccctcacctggct
cgctcattccaccacctcttccctctagatgcctttcaggagtctccactggaggagcac
acaggagacaggttctgccaggcctgccaaggcgagctgaaggacaaaagtgtgttcacg
tgtcctgcgtgtagcagtgttttctgtacggagtgtgatctcttcatccatgacacacta
cactgttgccctgcctgtatacacacacagggagcatcctga
DBGET
integrated database retrieval system
