Astyanax mexicanus (Mexican tetra): 103032833
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Entry
103032833 CDS
T05042
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04020
Calcium signaling pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103032833 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103032833 (grin3bb)
04082 Neuroactive ligand signaling
103032833 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103032833 (grin3bb)
Ion channels [BR:
amex04040
]
Ligand-gated channels
Glutamate (ionotropic)
103032833 (grin3bb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Uds1
Nicastrin
Motif
Other DBs
NCBI-GeneID:
103032833
NCBI-ProteinID:
XP_007240244
Ensembl:
ENSAMXG00000018792
LinkDB
All DBs
Position
16:17984923..18104632
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AA seq
1128 aa
AA seq
DB search
MSIVSSGFLARVYFGVHVVLQSLVGPGPGPGHAHPQPCHILARIGHTVRLGALVPPQQAL
RVQAALDRALAGLARAGGNLLPYNLSVEMVAGEPTSADPESLFRCVCQAVVVRGVSAVLA
FPQSHEELVHVDFMASFLEIPFVSIIEHGEPLRTQNRFHLQMTTRIPPSGLAMLLLAVLQ
RSGWEEGMAVLCQGWEEAGLLELLEQHGGSRWHLRATLNLSHSTPDDMDISEFLAEHFSQ
DQPPPASVLLFGDDPQCASSVLHSAHSLGLTLPTMHWIMGYPLSPDALHSIGLPLGLLAY
GEVDRKPLDYYIGDALQLVSRAVAAATIIRPDLALIQNMVNCFDKPNKHELPSSGQYISR
FLSNTTFTGLTGAVSVQRNISRVLTSQRVHVWSLRRDAVGQPTWVTVGSWEGGQLEVEEQ
GLWQGSSRRHRADGQRGREGSRWRAGFPVTGSRVRVVTLVEHPFVFTREVDEDGNCPAGQ
YCLDAGTNNSDTLDRFFTSRAQGNNTFLPLDYSKCCYGYCIDLLEKLSEDMDFEFDLYIV
GDGKYGAWKGGRWTGLVGDLLNGVADMAVTSFSINSARSKVMDFTSPFFSTSLGILVRSK
DTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRVRVFSYSSAL
NLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEELSGI
HDAKLHHPSHGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPTTPDGVATLKTDPPQLD
AFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNISEFISRYKSDGYM
DMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVTGALLTLAGEHAFYRLVL
PHIRRRQKFKYWLHTSQKIHRALNMTYEDVKRQRGTAEKSCNIQKAQPPQPPPPASTMSF
AKWNNASSEAAKETKDNKRVHFNLETLNTRRLLARVVAEGGQGSSGSGSGAPSGSASSSG
TASTGSLLSRVCENGGPVPLRPTMPLPSSPPSLASPPQDGELEELQEKIEEIRGQLRAAL
ARRAQLQTALAKERAAVVTTVTSVTSEAPPTVTATICRSLVKDLEGKR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgtgtcctccggattcttggcgcgcgtctacttcggagtgcacgtcgtgctc
cagtcgctggtgggacccggacccgggcccgggcacgcgcacccgcagccgtgccacatc
ctcgcgcggatcggccacaccgtgcgcctgggtgcgctcgtgcctccgcaacaggcgctg
cgcgtgcaggcggcgctggaccgcgcgctggccggcctggcgcgcgccggcggcaacctg
ctgccctacaacctgagcgtggagatggtggcgggcgagcccacgagcgccgacccggag
tcgctgttccgctgcgtgtgccaggcggtggtggtgcgcggcgtgtccgccgtgctcgcc
ttcccgcagagccacgaggagcttgtgcacgtggacttcatggcctcgttcctggagatc
ccgttcgtgagcatcattgagcacggggagccgctcaggacgcagaaccgatttcacctg
cagatgacgacccggatcccgccgtcggggctggccatgctactgctggccgtgctgcag
cggagtggctgggaggagggcatggcggtgctctgccagggctgggaggaagctggtctt
ctggagctcctggagcagcatggcggctctcgctggcacctgcgggccaccctcaacctc
tcgcacagcacgcccgacgacatggacatatctgagttcctagcagagcacttcagccag
gaccagcctccgccggcctccgtgctgctgttcggggacgacccgcagtgtgcctcctcc
gtcctgcacagcgcccacagcctgggcctcaccttgcccaccatgcactggattatggga
taccccttaagcccagatgctctgcactctatcggcctgccgttggggctgttggcctac
ggcgaggtcgaccgcaagcctctggactactacattggcgacgctctgcagctggtcagc
cgagccgttgccgccgccaccatcattcggccggacctggccctcatccagaacatggtc
aactgtttcgacaaacccaacaaacatgaactgccctcatctgggcagtacatttccagg
ttcctctctaatacgacctttacaggactgaccggtgcggtcagtgtgcagcgcaacata
tcacgggtcctcacctcacagcgcgtccacgtgtggagtctgcggagggacgctgtgggt
cagcccacctgggtgacggtgggcagctgggaaggtggtcagctggaggtggaggagcag
gggctgtggcagggctcttctcggcggcatcgggccgatggccagaggggacgtgagggc
agtcggtggagggctggcttccccgtgacgggcagccgggtgcgagtggtcaccctggtg
gagcacccgttcgttttcacccgggaggtggacgaggacgggaactgccctgctggtcag
tactgcttggatgcagggaccaacaactcagacactctggaccggttctttacgagtcgg
gcgcaggggaacaacactttcctcccgctggattacagcaagtgctgctacggctactgc
atcgacctgctggagaagctgtccgaggacatggatttcgagtttgacctctacatagtg
ggggatggcaagtacggggcgtggaagggcgggcgctggacggggctggttggagacctg
ctgaacggtgttgcggacatggccgtcaccagcttcagcatcaactcagcacgcagcaaa
gtgatggacttcaccagccccttcttctccaccagtttaggcatactggtgcgcagcaag
gacacagcggcccccattggagccttcatgtggccgctgcactggtccatgtgggtggga
atattcgtggcgcttcacatcaccgcactcttcctcactctctacgagtggaagagcccc
ttcggcatgacgccgcacggacgcaaccgcgtgagggtcttctcctactcgtcagccctc
aacctgtgctacgccatcctcttcggccggactgtctccagcaaaacgcccaagtgctgg
accggtcgcttccttatgaacctgtgggctatcttttgcttgctggttttgtccagttac
acggccaaccttgctgcagtcatggtcggggagaagacttttgaggagctttctggaata
catgatgccaaactccatcatccatcccacgggttccgcttcggcacagtgcgtgagagc
agtgctgaggactacatgaagaagagcttccccgagatgcacgagtacatgaggagattc
aacgagcccaccaccccagacggtgtggctactctcaagacagatcccccccagcttgat
gctttcatcatggacaaagctctgctggactatgaggtgtccatcgatgctgactgtaag
ctgctgaccgttgggaaacccttcgctattgaaggttatgggattggcctgccccagaac
tcccctctcacctccaacatctcagaattcatcagccgctacaaatcagacggctacatg
gacatgctgcacgacaagtggtataaggtggttccctgtgggaagagagtctttgcagtg
acagagacgttgcagatgggcattcgccacttctcagggttgtttgtgctgctgtgtgtg
ggcgtgacgggggcgttgctcactctggctggggaacacgccttctaccgtctggtgctg
cctcacattcgccgccggcagaaattcaaatactggctccataccagccagaaaatccac
agagccctgaacatgacgtacgaggacgtgaagcggcaaaggggcaccgctgaaaaaagc
tgtaacattcaaaaggcacagcccccacaaccgccgccacccgcctcgacgatgtccttc
gcaaagtggaacaacgcaagcagcgaggcagccaaagagaccaaggacaataagagggtt
cacttcaacctggagaccctcaacacccgccgccttctcgcccgagtggtggcagagggg
ggtcagggcagttcagggtcaggatctggggctccatctggttctgcttctagttctggg
actgcatctactggaagtcttctgtcaagagtgtgtgaaaacggtggacctgtgcctctg
agacccaccatgccgcttccttcatctccgccctccttggcgagccctcctcaggatgga
gaactggaggagctacaggagaaaatcgaggagatacgtggtcagctgagggcggcgctg
gcccgcagagcccagctccagaccgctctcgccaaagaaagggcggctgtggtgacgacg
gtgacgagtgtgacttccgaagctcctccgaccgtcaccgccaccatctgccgctcactc
gtcaaagatctggaggggaaaaggtga
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