Astyanax mexicanus (Mexican tetra): 103032897
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Entry
103032897 CDS
T05042
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103032897 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103032897 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
amex00536
]
103032897 (shhb)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C46: hedgehog family
103032897 (shhb)
Glycosaminoglycan binding proteins [BR:
amex00536
]
Heparan sulfate / Heparin
Morphogens
103032897 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hint_2
Vint
Hom_end_hint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
103032897
NCBI-ProteinID:
XP_007253071
Ensembl:
ENSAMXG00000008367
UniProt:
A0A8B9LQ30
LinkDB
All DBs
Position
4:34625186..34639598
Genome browser
AA seq
444 aa
AA seq
DB search
MLLMRRIARASLLLCLFLASCGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGAS
GKYEGKITRNSERFKELTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNHWPG
VKLRVTEGWDEDGNHLEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESKA
HIHCSVKAENSLAVKAGGCFPGWATVQLEDGGTKPVRDLRVGDRVLAADEEGRAVFSDFI
MFMDEAPRARRQFIVIETAEPVRRLVLTPAHLLFVRSSSSSSSSSSSSLMSARFASRVQV
GHEVFVTDGITEEGVGRVLQSARVVRVYSTELEHEGAYAPVTVHGTVVVDQVLASCYAAV
EQHWLAHSALVPARLSYAVAAWVRPHWLLGKSATTTNVTTTETEGHKGSGLHWYARLLTQ
VGSWLLHHGSFHPLGLVDMATSAS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgatgaggaggatcgcgcgcgcatccctgctcctctgcctcttcctcgcgtcc
tgcgggctcgcgtgcggtccgggccggggctacgggaggcgcagacaccccaaaaaactc
acgcctctcgcctacaagcagttcatccccaacgtggccgagaagaccctgggcgcgagc
ggcaaatacgagggcaagatcacgcgcaactccgagcgctttaaggagctcacgcccaac
tacaaccctgacatcatcttcaaagatgaagagaacaccaacgcggacaggctgatgaca
cagcgctgtaaagataagctgaactcgttggccatctcggtgatgaatcactggccggga
gtgaagctgcgagtgaccgaagggtgggatgaagacgggaatcacctggaggagtctctg
cattacgagggccgggcggtggacatcaccacgtctgaccgggacaagagcaaatacgga
atgctgtccagactggctgtagaggcgggcttcgactgggtctactacgagtccaaagct
cacatccactgctccgttaaagcagaaaactcgctggcggtgaaggccggcggctgcttc
cctggctgggctacggtgcagctggaggacggggggacgaaacccgtgagggacctgcgt
gtgggcgaccgtgtgctggcggcggatgaggaagggcgagcagtcttcagcgacttcatc
atgttcatggacgaggcgccgcgtgcacgcaggcagtttatcgtcattgagacggcggag
cctgtgaggagactggtgctaactcctgcgcacctgctgtttgtgcgttcctcctcctct
tcctcctcctcttcatcttcttcactgatgtccgcaaggtttgcaagcagggtgcaggtc
ggccatgaggtcttcgtaactgacgggatcacggaggaaggagttgggcgtgtattacag
agcgcacgtgttgtgagggtgtactctacagaactggagcacgagggggcgtatgcgccg
gtgaccgtgcacggcacggtggtggtggaccaggttttggcgtcgtgctacgctgctgta
gagcagcactggttggcgcactcggcccttgtacccgccaggctgagctacgcggtggcg
gcctgggttaggccgcactggctgctgggaaagagtgctacgacaaccaacgtgacgaca
acagagacggaagggcacaagggcagtggactgcactggtacgctcgcctgttgacgcag
gtgggctcgtggctcctgcaccacggctctttccacccactcggactcgtggacatggcg
acgagtgcgagctga
DBGET
integrated database retrieval system