Astyanax mexicanus (Mexican tetra): 103032941
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Entry
103032941 CDS
T05042
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103032941 (helz)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
103032941 (helz)
3'-5' decay
Other 3'-5' decay factors
103032941 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
AAA_30
ResIII
UvrD-helicase
PAM2
zf_CCCH_4
PhoH
Mov-10_helical
AAA_22
AAA_16
zf-CCCH_4
MOV-10_Ig-like
AAA_7
Motif
Other DBs
NCBI-GeneID:
103032941
NCBI-ProteinID:
XP_022528893
Ensembl:
ENSAMXG00000020742
LinkDB
All DBs
Position
19:complement(32401913..32479502)
Genome browser
AA seq
1925 aa
AA seq
DB search
MEDRRPQKSCEEAIGSLVRREYETAVAHSTEALLALGPCPPTPNTALLRKRALLYRIAGL
LQLKEYDQADEDCKHVLAEELGKAEGSFRAGLQNMLLDGSLQEVFSILSKALYGEPLNGM
MAKDMTRLKILLSEIEAINSKMTTQLPEESEEDVLEGWQFRPPPRGVTSSEEYTLCKRFL
EQGLCRYGAQCTSAHSQEELTEWQRRYASRLIRLKQQQEGKHYTENYMEALIEKWINSLS
PEKVLNDCVDGVTVEHSSDLSVTVNTKKSSHSWTFSLYCKPARTLHRIALLYDANRPHFS
IMAVSAGDTSSQVQQEGCESGCQEWSGAGLVQNGMDHCLYTVEVAFNTEIFGTFRQTVVF
DFGSEPVLMQRVMVDAASIEDLEHLMQARQQLLMTAKRWDSSCKTIVEFVPGENMELERS
LLSRYQIPLSADQLFTQSVLDKSLTRDNYQARLHDLLYIEEIAQYKEVSKFNIKVNLQLV
SSFMLTGISGGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVLLLPASRERVGQG
HPTSSKERVYEALIEEKTKDYIFLRICKECCDELGLAPDRELQVELQFQLNRLPLCEMHY
ALDRLRDNSILFPDTGLTPTIPWSPNRQWDEQLDPRLNAKQKEAILAITTPLSINLPPVL
IIGPYGTGKTFTLAQAVKHILKQPDSRVLICTHSNSAADLYIKDYLHPYVEAGNPHARPL
RVYFRNRWVKTVHPVVQQYCLISGAYFTFQMPTRQDIERHRVVVVTLSTSQYLCQLDLEP
GLFTHILLDEAAQAMECETIMPLALASKSTRIVLAGDHMQLSPFVYSEFARERNLHVSLL
DRLYEHYPSEYPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPPHKDFYPLTFFTA
RGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVAWGKLDEGSIGVVSPYADQVFRIRA
ELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQLVEDSTEDLDY
GFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETFISICHENGSLHGITFEQI
KAQLEALELKKTYVLNPLAPEFIPRALRPQHPQGPGKHQHSPPKAKGQLANHAEHFPPEG
FVQPSGAVLVGNPIQAFTPPGGAAPAAGKSPSPVQRIDPHTGASILYVPAVYGGNMVMPM
PLPLPWAGYQNRFAMDPRIMSHPAAMAAYNLNLRPAASRASPVLYGLSQPSPLGLAQPLP
SDKELLQEPSGNGKVDVNGKVEHGRLLTPERKAPELKEKQGEAESVQNKSPESHPGMGFP
ASRLLRKELPAQRSLNFHLAPPHPGFAPHPAGGPFPQQYGLPRPPLRMQAQHPGPMHPQP
AAFPPSFFSGHPMGQRSLQSPGLEGMDGGEGLVGGVPEELKSVVRGLPPQPQPQPHQPPP
PQPHQQPMRLNSFGEESLDSLLGDTLDGQSCTGIDALVPQQQQQQQAARLSQWNEPGPFL
QGAGPPFPLAQQLAHLGQPGLRLPQQLLRANWGLGPTAEDEPRPPMPRYPGLLREMLPQE
PFEHREAADMPPPQSRLLQYRQVQQPRSPGELPSPSSAPSNPHAHNHVPNPGAFPYPETS
RDLPSTMQPFHQHQAFSQAAFSLPPEHAAGPLPVKYLLSEAHWPHAGLQQSQVLGPPLPF
GLQSMGPRQEQGPLGPLQHQQQKQQQQPQHHQLQAQQSTLHNVEEYEPRGPGRPLYQRRI
SSSSPQPYPESVVQCKDPQDHPTPSYRYPPADLWPGTSGPGPNPGPAPLHNIPCNGASHL
VPHRDISVSKAMNAAEEHSQAECLQPPPHPTSLTSLQHHGQFPPLMPSKQTPPDPGGGGN
TSPGGSQAPAHSKPPTMSYASALRAPPKPRPLPEQVKKNSDPISLLKDLSIGSSNSSNGY
YSYFK
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaggagaccacagaagtcatgtgaagaagccattggatcattagtgaggcgg
gagtatgagacggcggtggcccacagcacggaggccctgctggccttggggccgtgtccc
cccacccccaacacggccctcctccgcaagcgtgctctgctctaccggattgcaggcctg
ctccagctgaaggagtatgatcaagctgatgaagactgtaagcatgtgcttgctgaagag
ttggggaaggcagagggaagttttcgagctggacttcagaacatgttgctggatggaagt
ctacaggaggtctttagcattctctccaaagctctgtatggagaaccgctgaatggaatg
atggctaaggatatgacgagactgaaaatacttctatctgaaattgaggccataaacagt
aagatgacgacgcagctgccggaggagagcgaggaggatgttctggaggggtggcagttc
cgtcctccacctcgaggagtcactagcagtgaggagtacactctgtgcaaaaggtttctg
gagcagggcctgtgtcgatacggggctcagtgcacatcagcccattctcaggaggagctg
acggagtggcagcggcgctatgcctccagactcatccggctgaagcagcagcaggaaggg
aagcactacactgagaactacatggaggcgctcatagaaaagtggatcaactccctctct
ccagagaaagtgctcaatgactgtgtggatggagttacagtggaacatagctcagatctg
tcagtcactgtcaacaccaaaaagtcttctcattcctggacattctcactttactgcaag
cctgcccgaaccctgcaccggatcgccctgctctacgacgccaaccggccacacttctcc
atcatggccgtgtcagcgggggacacgtccagccaggtgcagcaggaggggtgtgagagc
ggttgtcaggagtggagcggagcgggtctcgtgcagaacggcatggatcactgcctctac
accgtggaagtggccttcaacacagagatcttcgggaccttccggcagacggtggtcttt
gactttggttcagaacctgtgttgatgcagagagtgatggtggacgcggcatctattgaa
gacctggagcatttaatgcaggcccgccagcaactcctgatgacagcaaagcgctgggac
tcgtcctgtaagaccatcgtggagtttgttcctggtgagaacatggagctggagcgaagt
ctgctgagccgctatcagatcccactgtctgctgaccagctgttcactcagtctgtgctg
gacaagtccctcacccgtgataactaccaggcccgcctccacgacctgctctacatcgag
gagatcgctcagtacaaggaagtcagcaagtttaacatcaaggtgaatctacagcttgtg
tccagtttcatgctgactggcatctctgggggcgccaagtatgctcaaaatgggcaacta
tttgcccgtttcaaactgacggagacgttgtcagaggacacgctggcgggaaggttggtc
atgaccaaggtgaattctgtgctcctgctgccagcgagccgggaacgggtgggccaaggc
catcccaccagcagcaaggagcgtgtctacgaggctctgatcgaggagaagactaaggac
tacatcttcctgcgaatctgcaaagaatgctgtgatgagctcggtctggcccctgacagg
gagctacaggtggagctacagttccagcttaacaggctgccgctgtgtgaaatgcactat
gctttggatcgcctccgagacaacagtatcctctttcccgacaccggcctcacccccaca
atcccctggagccccaacaggcaatgggacgagcagctggaccctcgtctgaacgccaag
cagaaggaagccatattggccatcaccacacccctctccatcaacctcccccctgtgctg
atcatcggaccctacggcactggcaagaccttcacattagcccaggctgtcaagcacatc
ctcaagcagcccgactcgcgggtcctcatctgcacccattcaaacagcgccgctgatctg
tacataaaagactaccttcatccatacgtggaggcaggcaatccacacgcgagacctctc
agggtttactttaggaaccgctgggtaaagactgtgcaccccgtggtgcagcagtattgc
ctgatctctggagcttacttcaccttccagatgcccactcggcaggacatagagcgccac
cgtgtggtggtagtaaccctcagcacctcccagtacctctgtcagcttgatctggaacct
gggctcttcacacacatcctgttggacgaggctgcccaggccatggagtgtgagaccatc
atgccgctggcgctggccagtaagagcacacgcattgtcctggctggagatcacatgcag
ctgagtccgtttgtgtacagcgagtttgcgcgggagaggaacctgcatgtgtccctgctg
gaccggctgtacgagcactatccttcggagtacccctgtaggatcctgctgtgtgaaaac
taccgctcccatgaggcaatcatcaactatacgtcggagctgttttacgagggaaagctg
atggccagcggcaagcagccgcctcacaaggacttctaccctctgaccttcttcacggcc
cgtggggaggatgtgcaggagaagaacagcacggcctactacaacaatgccgaggtgttt
gagattgtggagcgtgtggaggaaatgaggaagaagtggccagtggcctggggcaaactg
gacgagggcagtatcggcgtggtgtctccctacgcggaccaggtcttccgcatccgtgct
gaactccgcaagaagcgcatgcacgaggtcagcgtggagagagtgctcaatgttcagggt
aagcagttccgagtgctgttcctgagcacggttcgcactcgtcacacctgcaagcacaag
cagaccgccatcaagaggaaggagcagctggtggaggactccacggaggacctggactac
ggcttcctgtccaactacaagctcctcaacactgccatcacacgcgcccagtccctggtg
gccgtcgtgggagaccccatcgctctgtgctcagtgggccgctgcagaaagttctgggaa
accttcatctccatctgtcacgagaacggcagtctgcacggcatcacgttcgagcagatc
aaggcccagctggaggctctggaactgaagaagacctacgtgctgaaccccctggccccg
gagttcatcccccgtgccctgagaccccagcacccccagggccctggcaagcaccagcac
tccccaccaaaggcgaaaggacagcttgccaatcacgctgagcactttcctcctgaaggc
ttcgttcagccgagcggcgccgtgttggtgggaaatcccatccaggctttcaccccgcct
ggaggagcagctccggccgccggcaagtcccccagccctgtgcagcgcatcgacccccac
accggagccagcatcctgtatgtgcccgctgtttacggaggcaacatggtcatgcccatg
ccactgccgctgccgtgggcgggctaccagaaccgcttcgccatggaccctcgaatcatg
agccacccagcagctatggcggcctacaatctgaacctgcggccagcagccagccgggcg
tctcccgttctgtacggcctgagtcagccctctcctctcggcctcgcccaaccgctccct
tctgacaaagagcttctgcaggagcccagcggcaacgggaaggttgacgttaatggaaaa
gtggagcatggcaggctgctgacacctgaaaggaaagcccccgagctgaaagagaaacag
ggagaggcagagtcggttcagaacaaaagccccgaatcccaccctggaatgggctttcct
gccagccgcctcctgcgcaaagaactgccggcccagcgctctctcaacttccacctggcc
ccaccccacccgggcttcgccccccaccctgccggcggccccttcccccagcagtacggc
ctccccagaccccctctccgcatgcaggctcagcacccaggacccatgcatcctcagcct
gccgcctttcctccttctttcttcagcggccacccaatgggtcagcgcagcctgcagtct
cctgggctggaggggatggacggaggggagggcctggtcgggggtgtacctgaggagctg
aagagtgtagttagaggtctgccccctcagccccagccccagccacatcagccgccacca
ccccagccacatcagcagcccatgcgcctcaacagctttggggaggagagcctggactca
ctgctgggagatactttagatggccagagctgtacaggcatagatgctttggttcctcaa
caacaacagcagcagcaggcggcacgtctgagccagtggaacgagcctggacccttcctg
cagggtgctggaccaccgttcccacttgcccaacagctagctcatctcggccagccaggc
ctgcggctcccacagcagctgctccgggccaactggggtctgggccccaccgctgaggat
gagcctcggccacccatgcccaggtatcctggtctgctgcgagagatgctcccacaggag
cccttcgagcaccgcgaagctgcagacatgccacccccgcagtcccgtctactgcagtac
aggcaggtgcagcagccccgcagtcctggagaactgccctctccctcctccgccccctca
aacccccacgcccacaaccacgtccccaacccgggcgccttcccttacccagaaaccagc
cgcgacctcccctccaccatgcagcccttccatcagcatcaggcttttagccaggccgcc
ttctccctgccccctgagcacgcagccggccccctgcccgtcaagtacctcctctctgaa
gcccactggccccacgccggcctgcagcagagccaggtgctgggcccacctctgcccttc
ggcctgcagtccatggggccccggcaggagcaggggcctcttgggccactgcagcaccag
cagcagaaacagcagcagcagccgcagcatcatcagctccaggcccagcagagtaccctg
cacaatgtagaagagtatgaaccacgagggcccggtcggccactgtaccagagaagaatc
tcttccagctctcctcaaccgtacccagagagcgtggtccagtgtaaggaccctcaggac
caccccacgccctcctacagataccccccagcagacctgtggcccggcaccagcggccct
ggccccaatccgggccctgctcctctccacaacattccgtgcaatggagcgagccacctc
gtccctcacagggacatatcagtttcaaaggcgatgaacgctgcggaagagcacagccag
gccgaatgtctgcagccgccgccccaccccactagtctcacgtctctccagcaccacgga
cagttcccacccctcatgcccagcaagcagacgcccccagaccccggaggagggggcaac
accagcccaggaggctcccaggctcctgcccactccaagccccccaccatgtcctacgcc
agcgccctccgagcccccccgaaaccccggccactgcccgagcaggtcaaaaagaacagc
gaccccatctctctgttaaaagaccttagcatagggagttcaaatagtagcaatgggtat
tactcgtattttaaataa
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