Astyanax mexicanus (Mexican tetra): 103032968
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Entry
103032968 CDS
T05042
Symbol
tmc8
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103032968 (tmc8)
03037 Cilium and associated proteins [BR:
amex03037
]
103032968 (tmc8)
Transporters [BR:
amex02000
]
Other transporters
Pores ion channels [TC:
1
]
103032968 (tmc8)
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103032968 (tmc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Saf_2TM
Motif
Other DBs
NCBI-GeneID:
103032968
NCBI-ProteinID:
XP_022525629
Ensembl:
ENSAMXG00000020582
LinkDB
All DBs
Position
16:complement(30416357..30432232)
Genome browser
AA seq
679 aa
AA seq
DB search
MEDNQRRVNFQRLSSEDSAISDDSCEYYQTDIYEHLPSTLSRWKSQFRDQAEDVDDDDDD
DDYDDFEYVSHLCRDWNSIQSLKMLPLCMQEKRNIRERLHQQKLKIGHWESWRRSQRIAW
RRMVEQLKGFFSRLLPWKHTLHKIEGRFGVGVKAYFVFLRYLLGLNLLNCVIIALSVLLP
SLYIKKGGPHCNLTSKDNGSVLDVFLGSGFLERSPVFYSFYKLKNIDKQCLNTSLLFFAG
MVLILLLSFLMIVRRTVVGYKHTWMTGNHFSMNMSYKVFCGWDFCIQDPQAAFLKHSFIK
NELKMDLEEQRFRLRVSQRTLKQKVVLFFLRLILNISVLALLGGSFALIYYATIKSQNKL
DNVHWTLKLLWEYLPPITITVVNFVLPQMFCVIVTFEDYSLTTQLNLTLVRSIFLKLASL
GIYLFFLITYLTTSIQNPETEFGKEMYKLTIFHLLACFCNAFLVSFPRAWIVDKYPSSML
AKKIGKPEFVIPLNILDLVYSQTVTWVGVFYCPLLPAISIVKLLVIFYMKMFTVIRCCAP
AQRMFRTTSSSVLFNFMLLLGLIMSAVTLGVNINMFVPGTCGPFMGDSSVFNVTSECVQT
LPRPVRNGISYITSEAFAFALILAEVIILTSLVSRGGANRKTIERLKDMLVMCSSDKRFL
VKQHATLIRRQRRIAPSTE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaccaacgcagggtcaacttccagagactgtcatctgaagacagcgctatc
tcagacgactcgtgcgagtactaccagaccgacatctatgagcacctgcccagtacactg
tccaggtggaagtcccagtttagggatcaggcagaagatgttgatgatgatgatgatgat
gatgattatgatgacttcgaatatgtttcgcatctgtgcagagactggaactccatacag
tcactgaaaatgctgccactgtgcatgcaggaaaagagaaatatcagggagagactacac
caacagaagctcaaaattggccactgggaatcatggaggcggagtcagcgaattgcatgg
aggcgaatggtggagcagcttaagggttttttctcgagactgttaccatggaaacacact
cttcataaaattgaaggcagattcggtgtgggggtgaaggcctactttgtgttcctgagg
tacctgctgggcctaaacctgctgaactgtgttatcatcgctttatcagtgctgctgcct
tcactgtacatcaaaaaaggaggcccgcactgcaacttaacgtcaaaggacaatggttct
gttttagacgttttcctgggttcgggctttctggaacgttccccagtcttctacagtttc
tacaaactcaaaaacattgacaaacaatgcctgaacacgtcactcctcttcttcgctggc
atggtcctcatcctcctcctcagtttcctcatgatagtgcgcaggacggtggtgggctac
aagcacacatggatgacgggaaaccattttagtatgaatatgagctacaaggttttctgt
ggatgggatttctgcatccaggacccccaggcagcctttctcaaacacagcttcatcaaa
aacgaactcaagatggacttggaggagcagagatttcgtctgagggtctcccagaggacc
ctgaagcagaaggtggtcctctttttcctgcgattaattctcaacatttctgtgctggct
ttacttggcggctcctttgccctgatctactacgccactataaagtctcagaataagctc
gataatgtccactggactctgaagctcctgtgggaatatctccctcccatcactattaca
gtagtcaactttgtgctgccgcagatgttctgcgtgatcgtaacgtttgaagactactcc
ctcaccacccagcttaatctcaccttggttcggagtatctttttgaagcttgcgagttta
ggcatctacctattcttcctcattacatacctcactacatcaatccagaatccagaaact
gagtttgggaaggaaatgtacaagctcactatatttcacctcctggcatgtttctgcaat
gctttcttggtgtccttccccagagcatggatagtggataaatatccttcctcaatgctg
gcaaagaaaataggcaagccggagtttgtgatcccgttaaacattctggatctggtctac
agtcagacagtcacttgggtgggagttttctactgccctcttctgccagccatcagtatt
gtaaagctgctggtcatattttacatgaagatgtttactgtgatccggtgttgcgctcca
gctcagaggatgttccggaccaccagctcttcggtcctgtttaacttcatgctcttgctg
ggcctcatcatgtcagctgttactctcggggtcaacatcaatatgtttgtgcctggtaca
tgtggcccatttatgggggacagttctgtgtttaatgtgaccagtgagtgtgtgcagacc
ctgccgagacctgttcggaacggcatcagttacatcacttctgaggcttttgcgttcgca
ctcatattggctgaggtaatcatcctgacatcccttgtctctcgtggaggagccaatcgt
aaaaccatagagagactgaaggatatgctagtcatgtgtagctcagataagcgtttcctg
gtgaagcagcatgccacactcatcaggcgtcagaggaggatcgccccgagtacggagtag
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integrated database retrieval system
